Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p27640 Brassica napus HOM05D008277 ORTHO05D011446 1.0e-136 490.3 304 100.0
BraA01t02902Z Brassica rapa HOM05D008277 ORTHO05D011446 1.0e-136 490.3 304 100.0
BraA04t16626Z Brassica rapa HOM05D008277 ORTHO05D011446 5.0e-123 444.9 304 91.1
BraA01t02693Z Brassica rapa HOM05D008277 ORTHO05D011446 1.2e-119 433.7 304 89.5
BraA03t14602Z Brassica rapa HOM05D008277 ORTHO05D011446 3.4e-111 405.6 287 94.1
BraA03t15700Z Brassica rapa HOM05D008277 ORTHO05D011446 4.9e-94 348.6 264 89.4
BNapus_Darmor_BZH_scaffold_103p00040 Brassica napus HOM05D008277 ORTHO05D011446 3.4e-87 325.9 156 94.9
BNapus_Darmor_BZH_scaffold_104p00040 Brassica napus HOM05D008277 ORTHO05D011446 3.4e-87 325.9 156 94.9
BraA05t21322Z Brassica rapa HOM05D008277 ORTHO05D011446 2.2e-86 323.2 156 92.9
A05p29650 Brassica napus HOM05D008277 ORTHO05D011446 9.2e-85 317.8 157 92.4
A03p66470 Brassica napus HOM05D008277 ORTHO05D011446 7.3e-82 308.1 164 89.0
C04p13480 Brassica napus HOM05D008277 ORTHO05D011446 3.6e-81 305.8 164 88.4
A03p67720 Brassica napus HOM05D008277 ORTHO05D011446 1.1e-80 304.3 164 87.2
A04p09680 Brassica napus HOM05D008277 ORTHO05D011446 2.0e-79 300.1 164 87.2
BraA09t38682Z Brassica rapa HOM05D008277 ORTHO05D011446 7.1e-77 291.6 234 89.3
BcaC05g27188 Brassica carinata HOM05D008277 ORTHO05D011446 1.6e-60 237.3 154 71.4
BcaB04g17639 Brassica carinata HOM05D008277 ORTHO05D011446 1.3e-59 234.2 152 71.1
BraA07t28379Z Brassica rapa HOM05D008277 ORTHO05D011446 3.9e-59 232.6 116 92.2
C07p01670 Brassica napus HOM05D008277 ORTHO05D018788 6.6e-59 231.9 141 75.2
BcaC07g38867 Brassica carinata HOM05D008277 ORTHO05D011446 1.1e-53 214.5 142 70.4
BcaB02g10530 Brassica carinata HOM05D008277 ORTHO05D011446 2.3e-51 206.8 154 66.9
BraA07t28336Z Brassica rapa HOM05D004489 ORTHO05D018788 3.0e-51 206.5 126 73.8
BraA01t03007Z Brassica rapa HOM05D008277 ORTHO05D016104 1.1e-50 204.5 196 86.2
BcaC07g38322 Brassica carinata HOM05D008277 ORTHO05D011446 8.1e-49 198.4 154 64.9
BraA10t42927Z Brassica rapa HOM05D008277 ORTHO05D011446 1.2e-44 184.5 86 97.7
BraA08t32901Z Brassica rapa HOM05D008277 ORTHO05D011446 2.1e-44 183.7 86 97.7
BraA07t28410Z Brassica rapa HOM05D008277 ORTHO05D011446 1.3e-41 174.5 89 91.0
A09p17520 Brassica napus HOM05D008277 ORTHO05D011446 2.8e-41 173.3 86 91.9
BcaB05g23045 Brassica carinata HOM05D008277 ORTHO05D093753 6.2e-41 172.2 164 52.4
BraA05t21198Z Brassica rapa HOM05D008277 ORTHO05D011446 1.4e-37 161.0 87 87.4
C02p24700 Brassica napus HOM05D004489 ORTHO05D098125 3.9e-35 152.9 273 45.4
BraA05t21197Z Brassica rapa HOM05D008277 ORTHO05D016104 7.4e-34 148.7 77 98.7
BraA03t15297Z Brassica rapa HOM05D008277 ORTHO05D042566 6.3e-33 145.6 77 97.4
BNapus_Darmor_BZH_scaffold_103p00050 Brassica napus HOM05D008277 ORTHO05D097096 1.4e-32 144.4 77 96.1
BNapus_Darmor_BZH_scaffold_104p00050 Brassica napus HOM05D008277 ORTHO05D103644 1.4e-32 144.4 77 96.1
BraA01t02695Z Brassica rapa HOM05D008277 ORTHO05D016104 3.1e-32 143.3 77 96.1
A05p24280 Brassica napus HOM05D008277 ORTHO05D102969 2.6e-31 140.2 77 93.5
BcaC01g02602 Brassica carinata HOM05D008277 ORTHO05D011446 7.9e-28 128.6 74 81.1
BcaC03g15256 Brassica carinata HOM05D004489 ORTHO05D010056 6.3e-25 119.0 67 80.6
BcaB05g24918 Brassica carinata HOM05D004489 ORTHO05D092070 3.8e-22 109.8 82 65.9
A05p23320 Brassica napus HOM05D008277 ORTHO05D000199 3.2e-21 106.7 75 81.3
C04p13490 Brassica napus HOM05D008277 ORTHO05D100146 3.2e-21 106.7 75 81.3
BcaB04g17829 Brassica carinata HOM05D008277 ORTHO05D011446 6.1e-20 102.4 60 83.3
C04p22330 Brassica napus HOM05D008277 ORTHO05D011446 3.0e-19 100.1 80 60.0
A09p31660 Brassica napus HOM05D008277 ORTHO05D042566 1.7e-17 94.4 69 78.3
BcaC04g22308 Brassica carinata HOM05D008277 ORTHO05D011446 2.8e-17 93.6 61 78.7
BraA03t15298Z Brassica rapa HOM05D008277 ORTHO05D028234 3.7e-17 93.2 41 95.1
A05p29420 Brassica napus HOM05D008277 ORTHO05D011446 2.6e-15 87.0 52 82.7
BcaB08g35276 Brassica carinata HOM05D008277 ORTHO05D091063 3.5e-15 86.7 102 47.1
BcaC07g38382 Brassica carinata HOM05D004489 ORTHO05D010056 5.7e-10 69.3 39 71.8
BolC3t18662H Brassica oleracea HOM05D008277 ORTHO05D028234 7.5e-10 68.9 39 69.2
BcaC04g22798 Brassica carinata HOM05D004489 ORTHO05D010056 9.7e-10 68.6 39 69.2
BcaB04g18789 Brassica carinata HOM05D008277 ORTHO05D016104 2.8e-09 67.0 35 97.1
BolC9t56835H Brassica oleracea HOM05D008277 ORTHO05D011446 2.4e-08 63.9 42 78.6
BolC8t47152H Brassica oleracea HOM05D008277 ORTHO05D028234 7.0e-08 62.4 37 67.6
A01p28050 Brassica napus HOM05D008277 ORTHO05D028234 9.1e-08 62.0 37 67.6
BolC8t48603H Brassica oleracea HOM05D008277 ORTHO05D011446 1.2e-07 61.6 42 76.2


User provided reference genes

Program Settings