Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p27330 Brassica napus HOM05D007336 ORTHO05D009339 4.0e-66 254.6 128 100.0
BraA01t02872Z Brassica rapa HOM05D007336 ORTHO05D009339 4.0e-66 254.6 128 100.0
C01p35170 Brassica napus HOM05D007336 ORTHO05D009339 5.3e-66 254.2 128 99.2
BolC1t03475H Brassica oleracea HOM05D007336 ORTHO05D009339 5.3e-66 254.2 128 99.2
BcaC09g49567 Brassica carinata HOM05D007336 ORTHO05D009339 7.9e-62 240.4 128 96.1
BcaB04g20156 Brassica carinata HOM05D007336 ORTHO05D009339 4.3e-60 234.6 128 93.0
Thhalv10023757m.g Eutrema salsugineum HOM05D007336 ORTHO05D009339 4.6e-54 214.5 126 84.9
Sp2g06650 Schrenkiella parvula HOM05D007336 ORTHO05D009339 7.9e-54 213.8 128 85.2
AL1G65880 Arabidopsis lyrata HOM05D007336 ORTHO05D009339 5.1e-53 211.1 128 82.8
Aa31LG2G11600 Aethionema arabicum HOM05D007336 ORTHO05D009339 1.3e-51 206.5 128 82.8
CARHR289820 Cardamine hirsuta HOM05D007336 ORTHO05D009339 3.7e-51 204.9 128 79.7
AT1G56260 Arabidopsis thaliana HOM05D007336 ORTHO05D009339 4.8e-51 204.5 129 82.2
Carub.0002s0790 Capsella rubella HOM05D007336 ORTHO05D009339 1.4e-47 193.0 129 76.0
THA.LOC104805904 Tarenaya hassleriana HOM05D007336 ORTHO05D009339 6.3e-43 177.6 122 69.7
TAR362G0973 Trochodendron aralioides HOM05D007336 ORTHO05D009339 7.2e-39 164.1 115 68.7
MD04G1197300 Malus domestica HOM05D007336 ORTHO05D009339 9.4e-39 163.7 115 67.0
MD12G1210100 Malus domestica HOM05D007336 ORTHO05D009339 1.2e-38 163.3 115 67.0
Aqoxy2G02873 Aquilegia oxysepala HOM05D007336 ORTHO05D009339 2.1e-38 162.5 124 60.5
Prupe.6G317700 Prunus persica HOM05D007336 ORTHO05D009339 2.1e-38 162.5 115 67.0
Cfa006663 Carpinus fangiana HOM05D007336 ORTHO05D009339 3.6e-38 161.8 115 65.2
GSVIVG01031156001 Vitis vinifera HOM05D007336 ORTHO05D009339 1.0e-37 160.2 115 64.3
CiPaw.08G158700 Carya illinoinensis HOM05D007336 ORTHO05D009339 3.0e-37 158.7 115 65.2
COL.COLO4_03798 Corchorus olitorius HOM05D007336 ORTHO05D009339 3.0e-37 158.7 115 66.1
Manes.01G127100 Manihot esculenta HOM05D007336 ORTHO05D009339 3.9e-37 158.3 115 65.2
Duzib128G0390 Durio zibethinus HOM05D007336 ORTHO05D009339 5.1e-37 157.9 115 67.0
Atru.chr1.2192 Acer truncatum HOM05D007336 ORTHO05D009339 6.7e-37 157.5 124 61.3
RcHm_v2.0_Chr3g0456501 Rosa chinensis HOM05D007336 ORTHO05D009339 6.7e-37 157.5 115 64.3
Lalb_Chr16g0391581 Lupinus albus HOM05D007336 ORTHO05D009339 8.8e-37 157.1 115 63.5
Thecc.05G317300 Theobroma cacao HOM05D007336 ORTHO05D009339 1.1e-36 156.8 115 65.2
Gorai.007G303000 Gossypium raimondii HOM05D007336 ORTHO05D009339 2.0e-36 156.0 115 65.2
Atru.chr1.2191 Acer truncatum HOM05D007336 ORTHO05D009339 2.5e-36 155.6 124 60.5
Psat0s3672g0040 Pisum sativum HOM05D007336 ORTHO05D009339 3.3e-36 155.2 115 60.0
Ciclev10002848m.g Citrus clementina HOM05D007336 ORTHO05D009339 7.4e-36 154.1 115 63.5
Gohir.D11G280800 Gossypium hirsutum HOM05D007336 ORTHO05D009339 1.7e-35 152.9 115 64.3
Eucgr.H03264 Eucalyptus grandis HOM05D007336 ORTHO05D009339 2.2e-35 152.5 114 61.4
Migut.G00122 Erythranthe guttata HOM05D007336 ORTHO05D009339 2.8e-35 152.1 122 63.1
Eucgr.H03266 Eucalyptus grandis HOM05D007336 ORTHO05D009339 3.7e-35 151.8 114 60.5
PGR031G1948 Punica granatum HOM05D007336 ORTHO05D009339 3.7e-35 151.8 121 59.5
Glyma.19G230700 Glycine max HOM05D007336 ORTHO05D009339 6.3e-35 151.0 115 60.9
FvH4_6g06960 Fragaria vesca HOM05D007336 ORTHO05D009339 8.2e-35 150.6 115 62.6
CANSAT54G2288 Cannabis sativa HOM05D007336 ORTHO05D009339 1.8e-34 149.4 115 61.7
FAN05G1709 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.8e-34 149.4 115 61.7
FAN05G3591 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.8e-34 149.4 115 61.7
Lj1g0024848 Lotus japonicus HOM05D007336 ORTHO05D009339 1.8e-34 149.4 115 56.5
arahy.Tifrunner.gnm1.ann1.N7WCQ3 Arachis hypogaea HOM05D000001 ORTHO05D010781 5.3e-34 147.9 116 62.9
Phvul.001G227200 Phaseolus vulgaris HOM05D007336 ORTHO05D009339 5.3e-34 147.9 116 60.3
Potri.005G021800 Populus trichocarpa HOM05D007336 ORTHO05D009339 6.9e-34 147.5 110 62.7
arahy.Tifrunner.gnm1.ann1.63GRQU Arachis hypogaea HOM05D007336 ORTHO05D010781 9.1e-34 147.1 116 62.1
Haze_04108 Corylus avellana HOM05D002548 ORTHO05D003031 9.1e-34 147.1 153 51.6
FAN09G1805 Fragaria x ananassa HOM05D007336 ORTHO05D009339 9.1e-34 147.1 115 61.7
FAN14G5314 Fragaria x ananassa HOM05D007336 ORTHO05D009339 9.1e-34 147.1 115 61.7
Dinv29713 Davidia involucrata HOM05D002548 ORTHO05D003031 2.6e-33 145.6 115 63.5
MELO3C004210.2 Cucumis melo HOM05D007336 ORTHO05D009339 3.4e-33 145.2 116 62.1
vmacro08103 Vaccinium macrocarpon HOM05D007336 ORTHO05D009339 3.4e-33 145.2 124 57.3
MSTRG.3884 Avicennia marina HOM05D007336 ORTHO05D009339 4.5e-33 144.8 123 58.5
ClCG02G015210 Citrullus lanatus HOM05D007336 ORTHO05D009339 7.7e-33 144.1 116 61.2
Rhsim04G0227800 Rhododendron simsii HOM05D007336 ORTHO05D009339 1.0e-32 143.7 123 58.5
Actinidia40305 Actinidia chinensis HOM05D007336 ORTHO05D009339 1.3e-32 143.3 122 58.2
CSS0001044 Camellia sinensis var. sinensis HOM05D007336 ORTHO05D009339 1.3e-32 143.3 122 59.8
FAN02G4454 Fragaria x ananassa HOM05D007336 ORTHO05D009339 1.7e-32 142.9 125 58.4
CsaV3_2G006800 Cucumis sativus L. HOM05D007336 ORTHO05D009339 3.8e-32 141.7 116 60.3
SalBow2G0618 Salvia bowleyana HOM05D007336 ORTHO05D009339 6.5e-32 141.0 123 56.1
Dinv44340 Davidia involucrata HOM05D007336 ORTHO05D009339 1.4e-31 139.8 115 61.7
AUR62015269 Chenopodium quinoa HOM05D007336 ORTHO05D009339 1.9e-31 139.4 115 58.3
Cc03_g01420 Coffea canephora HOM05D007336 ORTHO05D009339 2.5e-31 139.0 115 59.1
SEGI_32823 Sequoiadendron giganteum HOM05D007336 ORTHO05D009339 2.5e-31 139.0 117 57.3
CDE02G0601 Ceratophyllum demersum HOM05D007336 ORTHO05D009339 4.2e-31 138.3 113 59.3
AUR62018066 Chenopodium quinoa HOM05D007336 ORTHO05D009339 4.2e-31 138.3 115 57.4
SGA_v2.0_scaffold104G30104 Striga asiatica HOM05D007336 ORTHO05D009339 7.2e-31 137.5 116 57.8
Hund20531 Selenicereus undatus HOM05D007336 ORTHO05D009339 1.2e-30 136.7 115 57.4
Nitab4.5_0000306g0320 Nicotiana tabacum HOM05D007336 ORTHO05D009339 1.6e-30 136.3 110 59.1
Gohir.A11G270600 Gossypium hirsutum HOM05D007336 ORTHO05D009339 2.7e-30 135.6 99 67.7
EL10Ac3g06656 Beta vulgaris HOM05D007336 ORTHO05D009339 3.6e-30 135.2 115 56.5
HPP92_013733 Vanilla planifolia HOM05D007336 ORTHO05D009339 3.6e-30 135.2 115 55.7
Sc19g0005520 Simmondsia chinensis HOM05D007336 ORTHO05D009339 6.1e-30 134.4 116 56.9
TPR.G39916 Trifolium pratense HOM05D007336 ORTHO05D009339 1.4e-29 133.3 115 53.9
CAN.G14.12 Capsicum annuum HOM05D007336 ORTHO05D009339 1.8e-29 132.9 110 58.2
Lsat_1_v5_gn_6_76001 Lactuca sativa HOM05D007336 ORTHO05D009339 1.8e-29 132.9 115 57.4
PGSC0003DMG400006241 Solanum tuberosum HOM05D007336 ORTHO05D009339 2.3e-29 132.5 110 59.1
DCAR_030493 Daucus carota HOM05D007336 ORTHO05D009339 6.7e-29 131.0 115 55.7
Medtr7g112530 Medicago truncatula HOM05D007336 ORTHO05D009339 6.7e-29 131.0 115 53.0
Zm00001eb300400 Zea mays HOM05D007336 ORTHO05D009339 8.8e-29 130.6 114 56.1
PSO832G0037 Papaver somniferum HOM05D007336 ORTHO05D009339 1.7e-27 126.3 111 54.1
Peaxi162Scf00065g01021 Petunia axillaris HOM05D007336 ORTHO05D009339 2.8e-27 125.6 110 57.3
MBI18_g25083_MAGBIO Magnolia biondii HOM05D007336 ORTHO05D009339 8.2e-27 124.0 143 48.3
Nitab4.5_0002755g0010 Nicotiana tabacum HOM05D007336 ORTHO05D009339 8.2e-27 124.0 127 50.4
QL03p019121 Quercus lobata HOM05D007336 ORTHO05D009339 1.8e-26 122.9 80 70.0
Solyc01g065710.3 Solanum lycopersicum HOM05D007336 ORTHO05D009339 2.4e-26 122.5 110 54.5
Sopen01g027110 Solanum pennellii HOM05D007336 ORTHO05D009339 2.4e-26 122.5 110 54.5
unitig_46.g18696 Utricularia gibba HOM05D007336 ORTHO05D009339 4.1e-26 121.7 111 54.1
Prupe.2G221300 Prunus persica HOM05D007336 ORTHO05D009339 7.0e-26 120.9 80 70.0
Cpa.g.sc48.123 Carica papaya HOM05D007336 ORTHO05D009339 4.5e-25 118.2 197 38.1
VMungo1383G0834 Vigna mungo HOM05D007336 ORTHO05D009339 1.1e-23 113.6 80 63.8
ATR0693G059 Amborella trichopoda HOM05D007336 ORTHO05D009339 1.5e-23 113.2 82 63.4
AagrBONN_evm.TU.Sc2ySwM_344.3688 Anthoceros agrestis HOM05D007336 ORTHO05D009339 1.5e-23 113.2 114 48.2
Nn4g25729 Nelumbo nucifera HOM05D007336 ORTHO05D009339 3.2e-23 112.1 86 62.8
Eucgr.H03263 Eucalyptus grandis HOM05D007336 ORTHO05D009339 5.5e-23 111.3 80 61.2
Sed0016582 Sechium edule HOM05D007336 ORTHO05D009339 1.2e-22 110.2 77 66.2
Eucgr.H03265 Eucalyptus grandis HOM05D007336 ORTHO05D009339 3.6e-22 108.6 80 60.0
Eucgr.L02901 Eucalyptus grandis HOM05D007336 ORTHO05D009339 3.6e-22 108.6 80 60.0
Ah.04g153680 Amaranthus hybridus HOM05D007336 ORTHO05D009339 1.4e-21 106.7 87 58.6
HanXRQChr13g0413951 Helianthus annuus HOM05D007336 ORTHO05D009339 1.8e-21 106.3 80 62.5
Pp3c22_13440 Physcomitrium patens HOM05D007336 ORTHO05D009339 5.2e-21 104.8 115 42.6
Prupe.3G209800 Prunus persica HOM05D007336 ORTHO05D009339 1.1e-20 103.6 103 51.5
Glyma.03G233600 Glycine max HOM05D007336 ORTHO05D009339 9.7e-20 100.5 82 57.3
Oeu031988.1 Olea europaea HOM05D007336 ORTHO05D009339 5.9e-17 91.3 86 52.3
SMO137G0008 Selaginella moellendorffii HOM05D007336 ORTHO05D009339 5.9e-17 91.3 110 44.5
Mapoly0064s0018 Marchantia polymorpha HOM05D007336 ORTHO05D009339 4.0e-13 78.6 80 48.8


User provided reference genes

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