Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p27150 Brassica napus HOM05D006416 ORTHO05D008054 3.3e-153 545.0 285 100.0
BraA01t02850Z Brassica rapa HOM05D006416 ORTHO05D008054 3.3e-153 545.0 285 100.0
BcaC09g49606 Brassica carinata HOM05D006416 ORTHO05D008054 2.4e-151 538.9 285 99.3
C01p34560 Brassica napus HOM05D006416 ORTHO05D008054 2.4e-151 538.9 285 99.3
BolC1t03427H Brassica oleracea HOM05D006416 ORTHO05D008054 2.4e-151 538.9 285 99.3
BcaB04g20144 Brassica carinata HOM05D006416 ORTHO05D008054 3.9e-146 521.5 286 96.9
SpUn0002_0460 Schrenkiella parvula HOM05D006416 ORTHO05D008054 4.8e-144 514.6 285 94.7
CARHR055910 Cardamine hirsuta HOM05D006416 ORTHO05D008054 5.0e-133 478.0 287 89.5
AT1G54780 Arabidopsis thaliana HOM05D006416 ORTHO05D008054 1.2e-131 473.4 288 89.2
AL1G65240 Arabidopsis lyrata HOM05D006416 ORTHO05D008054 1.6e-131 473.0 288 88.2
Thhalv10023632m.g Eutrema salsugineum HOM05D006416 ORTHO05D008054 8.0e-131 470.7 285 89.1
Carub.0002s0864 Capsella rubella HOM05D006416 ORTHO05D008054 2.2e-128 462.6 288 87.5
Aa31LG2G11890 Aethionema arabicum HOM05D006416 ORTHO05D008054 1.2e-121 440.3 294 81.6
THA.LOC104823736 Tarenaya hassleriana HOM05D006416 ORTHO05D008054 1.0e-117 427.2 299 77.3
Haze_04238 Corylus avellana HOM05D006416 ORTHO05D008054 1.4e-111 406.8 291 74.6
QL03p004338 Quercus lobata HOM05D006416 ORTHO05D008054 4.1e-111 405.2 294 75.5
MELO3C004307.2 Cucumis melo HOM05D006416 ORTHO05D008054 2.0e-110 402.9 298 73.8
FvH4_6g05320 Fragaria vesca HOM05D006416 ORTHO05D008054 2.0e-110 402.9 293 74.7
FAN14G2526 Fragaria x ananassa HOM05D006416 ORTHO05D008054 2.0e-110 402.9 293 74.7
Glyma.20G231600 Glycine max HOM05D006416 ORTHO05D008054 2.7e-110 402.5 295 75.9
Glyma.10G157100 Glycine max HOM05D006416 ORTHO05D008054 3.5e-110 402.1 295 75.9
Cfa006543 Carpinus fangiana HOM05D006416 ORTHO05D008054 4.5e-110 401.7 299 73.6
Sed0000831 Sechium edule HOM05D006416 ORTHO05D008054 4.5e-110 401.7 291 76.3
FAN14G3791 Fragaria x ananassa HOM05D006416 ORTHO05D008054 5.9e-110 401.4 293 74.4
ClCG02G016070 Citrullus lanatus HOM05D006416 ORTHO05D008054 7.8e-110 401.0 299 72.6
Eucgr.H04456 Eucalyptus grandis HOM05D006416 ORTHO05D008054 7.8e-110 401.0 292 73.6
FAN02G3793 Fragaria x ananassa HOM05D006416 ORTHO05D008054 7.8e-110 401.0 293 74.4
FAN05G2936 Fragaria x ananassa HOM05D006416 ORTHO05D008054 7.8e-110 401.0 293 74.7
FAN09G2836 Fragaria x ananassa HOM05D006416 ORTHO05D008054 7.8e-110 401.0 293 74.4
Gohir.D11G272900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 1.0e-109 400.6 296 72.6
Gohir.A11G262900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 1.3e-109 400.2 296 73.3
Gorai.007G294200 Gossypium raimondii HOM05D006416 ORTHO05D008054 2.3e-109 399.4 296 72.3
arahy.Tifrunner.gnm1.ann1.ICF70N Arachis hypogaea HOM05D006416 ORTHO05D008054 2.9e-109 399.1 293 74.7
FAN05G0060 Fragaria x ananassa HOM05D006416 ORTHO05D008054 2.9e-109 399.1 293 74.4
Duzib177G0710 Durio zibethinus HOM05D006416 ORTHO05D008054 5.0e-109 398.3 296 74.3
Potri.013G026400 Populus trichocarpa HOM05D006416 ORTHO05D008054 5.0e-109 398.3 294 73.1
RcHm_v2.0_Chr3g0454061 Rosa chinensis HOM05D006416 ORTHO05D008054 5.0e-109 398.3 290 73.4
Duzib128G1696 Durio zibethinus HOM05D006416 ORTHO05D008054 8.6e-109 397.5 296 73.3
arahy.Tifrunner.gnm1.ann1.L7FLNG Arachis hypogaea HOM05D006416 ORTHO05D008054 1.1e-108 397.1 293 74.4
Ciclev10002001m.g Citrus clementina HOM05D006416 ORTHO05D008054 1.1e-108 397.1 300 71.7
MD12G1224000 Malus domestica HOM05D006416 ORTHO05D008054 1.1e-108 397.1 299 70.9
Thecc.05G308500 Theobroma cacao HOM05D006416 ORTHO05D008054 1.1e-108 397.1 296 73.3
CANSAT54G1414 Cannabis sativa HOM05D006416 ORTHO05D008054 1.5e-108 396.7 301 72.8
CiPaw.08G166800 Carya illinoinensis HOM05D006416 ORTHO05D008054 3.3e-108 395.6 296 73.0
Lj9A681T37 Lonicera japonica HOM05D006416 ORTHO05D008054 3.3e-108 395.6 302 72.5
Cpa.g.sc48.9 Carica papaya HOM05D006416 ORTHO05D008054 4.3e-108 395.2 299 72.6
Prupe.6G330400 Prunus persica HOM05D006416 ORTHO05D008054 4.3e-108 395.2 297 73.1
Atru.chr2.491 Acer truncatum HOM05D006416 ORTHO05D008054 7.3e-108 394.4 304 72.0
MD04G1209400 Malus domestica HOM05D006416 ORTHO05D008054 9.5e-108 394.0 297 71.7
Potri.005G038700 Populus trichocarpa HOM05D006416 ORTHO05D008054 1.6e-107 393.3 293 73.0
Sabra05G0037800 Salix brachista HOM05D006416 ORTHO05D008054 2.1e-107 392.9 294 72.4
Phvul.007G182400 Phaseolus vulgaris HOM05D006416 ORTHO05D008054 4.7e-107 391.7 294 73.8
EL10Ac4g09303 Beta vulgaris HOM05D006416 ORTHO05D008054 6.1e-107 391.3 297 71.0
Manes.09G163500 Manihot esculenta HOM05D006416 ORTHO05D008054 6.1e-107 391.3 300 70.0
GSVIVG01000004001 Vitis vinifera HOM05D006416 ORTHO05D008054 6.1e-107 391.3 297 72.1
Ca_10088_v3 Cicer arietinum L. HOM05D006416 ORTHO05D008054 8.0e-107 391.0 294 72.8
HanXRQChr09g0258731 Helianthus annuus HOM05D006416 ORTHO05D008054 8.0e-107 391.0 296 72.0
Lalb_Chr06g0167821 Lupinus albus HOM05D006416 ORTHO05D008054 8.0e-107 391.0 295 73.6
COL.COLO4_13518 Corchorus olitorius HOM05D006416 ORTHO05D008054 1.4e-106 390.2 299 70.6
TPR.G2722 Trifolium pratense HOM05D006416 ORTHO05D008054 1.8e-106 389.8 290 72.8
PGR031G2709 Punica granatum HOM05D006416 ORTHO05D008054 2.3e-106 389.4 295 71.2
Rhsim07G0179600 Rhododendron simsii HOM05D006416 ORTHO05D008054 2.3e-106 389.4 296 72.3
Actinidia23608 Actinidia chinensis HOM05D006416 ORTHO05D008054 3.0e-106 389.0 299 69.9
Nn4g26146 Nelumbo nucifera HOM05D006416 ORTHO05D008054 6.8e-106 387.9 299 70.9
Ah.06g190130 Amaranthus hybridus HOM05D006416 ORTHO05D008054 8.9e-106 387.5 300 71.3
DCAR_029435 Daucus carota HOM05D006416 ORTHO05D008054 8.9e-106 387.5 235 83.0
HanXRQChr15g0486581 Helianthus annuus HOM05D006416 ORTHO05D008054 8.9e-106 387.5 288 71.5
SGA_v2.0_scaffold204G41638 Striga asiatica HOM05D006416 ORTHO05D008054 1.2e-105 387.1 288 72.2
TWI12G1406 Tripterygium wilfordii HOM05D006416 ORTHO05D008054 1.2e-105 387.1 293 72.0
Lsat_1_v5_gn_8_116020 Lactuca sativa HOM05D006416 ORTHO05D008054 1.5e-105 386.7 299 69.9
Oeu043843.1 Olea europaea HOM05D006416 ORTHO05D008054 2.0e-105 386.3 288 71.5
CAN.G1134.18 Capsicum annuum HOM05D006416 ORTHO05D008054 4.4e-105 385.2 299 71.2
Cc02_g32670 Coffea canephora HOM05D006416 ORTHO05D008054 5.8e-105 384.8 296 71.3
CsaV3_2G004910 Cucumis sativus L. HOM05D006416 ORTHO05D008054 5.8e-105 384.8 313 68.4
Nitab4.5_0007238g0010 Nicotiana tabacum HOM05D006416 ORTHO05D008054 7.5e-105 384.4 298 69.5
ECA232G3707 Erigeron canadensis HOM05D006416 ORTHO05D008054 9.8e-105 384.0 235 80.9
Medtr1g082420 Medicago truncatula HOM05D006416 ORTHO05D008054 9.8e-105 384.0 294 71.8
Lj5g0006935 Lotus japonicus HOM05D006416 ORTHO05D008054 1.7e-104 383.3 300 70.3
Nn1g02093 Nelumbo nucifera HOM05D006416 ORTHO05D008054 1.7e-104 383.3 279 74.2
Peaxi162Scf00434g00329 Petunia axillaris HOM05D006416 ORTHO05D008054 4.9e-104 381.7 290 68.6
Psat6g148880 Pisum sativum HOM05D006416 ORTHO05D008054 6.4e-104 381.3 290 70.7
Dinv22903 Davidia involucrata HOM05D006416 ORTHO05D008054 1.1e-103 380.6 229 83.8
Sc16g0008340 Simmondsia chinensis HOM05D006416 ORTHO05D008054 1.9e-103 379.8 289 72.3
Nitab4.5_0004940g0060 Nicotiana tabacum HOM05D006416 ORTHO05D008054 3.2e-103 379.0 299 67.6
Sopen01g042190 Solanum pennellii HOM05D006416 ORTHO05D008054 7.0e-103 377.9 291 69.4
PGSC0003DMG402028574 Solanum tuberosum HOM05D006416 ORTHO05D008054 7.0e-103 377.9 291 69.4
TAR362G1050 Trochodendron aralioides HOM05D006416 ORTHO05D008054 1.2e-102 377.1 296 68.6
Solyc01g098640.3 Solanum lycopersicum HOM05D006416 ORTHO05D008054 1.6e-102 376.7 291 69.1
Oeu032896.2 Olea europaea HOM05D006416 ORTHO05D008054 4.6e-102 375.2 298 68.5
MBI19_g27532_MAGBIO Magnolia biondii HOM05D006416 ORTHO05D008054 6.0e-102 374.8 295 69.2
Migut.H00517 Erythranthe guttata HOM05D006416 ORTHO05D008054 7.8e-102 374.4 295 68.5
Aqoxy2G03216 Aquilegia oxysepala HOM05D006416 ORTHO05D008054 1.7e-101 373.2 297 69.4
MSTRG.2929 Avicennia marina HOM05D006416 ORTHO05D008054 3.0e-101 372.5 287 68.3
PSO170G0754 Papaver somniferum HOM05D006416 ORTHO05D008054 4.3e-100 368.6 294 67.3
CDE02G0677 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 9.5e-100 367.5 284 68.7
PSO407G0317 Papaver somniferum HOM05D006416 ORTHO05D008054 1.2e-99 367.1 298 66.4
CDE08G0960 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 1.1e-98 364.0 294 67.7
SalBow1G1453 Salvia bowleyana HOM05D006416 ORTHO05D008054 1.1e-98 364.0 288 70.5
unitig_899.g15132 Utricularia gibba HOM05D000909 ORTHO05D000928 1.1e-98 364.0 262 71.0
ATR0626G312 Amborella trichopoda HOM05D006416 ORTHO05D008054 1.8e-98 363.2 299 67.2
Zm00001eb346800 Zea mays HOM05D006416 ORTHO05D008054 3.4e-97 359.0 292 69.2
Os05g0401100 Oryza sativa ssp. japonica HOM05D006416 ORTHO05D008054 7.5e-97 357.8 232 78.0
HPP92_006953 Vanilla planifolia HOM05D006416 ORTHO05D008054 4.9e-96 355.1 295 66.4
CSS0022908 Camellia sinensis var. sinensis HOM05D006416 ORTHO05D008054 1.6e-91 340.1 296 64.2
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.6e-91 339.0 257 69.6
Migut.C00218 Erythranthe guttata HOM05D006416 ORTHO05D008054 2.3e-90 336.3 205 81.0
Pp3c7_6980 Physcomitrium patens HOM05D006416 ORTHO05D008054 4.0e-90 335.5 224 75.4
Pp3c11_19220 Physcomitrium patens HOM05D006416 ORTHO05D008054 3.4e-89 332.4 224 75.4
SEGI_37406 Sequoiadendron giganteum HOM05D006416 ORTHO05D008054 2.1e-86 323.2 270 64.4
SMO329G0005 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 1.4e-82 310.5 235 65.5
Mapoly0079s0006 Marchantia polymorpha HOM05D006416 ORTHO05D008054 7.6e-81 304.7 246 65.4
Hma1.2p1_0666F.1_g199430 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 1.4e-74 283.9 234 62.4
CBR_g30711 Chara braunii HOM05D006416 ORTHO05D008054 4.4e-73 278.9 234 62.0
SMO353G0282 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 1.4e-71 273.9 203 64.5
Aa31LG1G5580 Aethionema arabicum HOM05D006416 ORTHO05D008054 1.2e-65 254.2 137 92.7
Lalb_Chr02g0148391 Lupinus albus HOM05D006416 ORTHO05D008054 1.3e-61 240.7 213 65.3
Hma1.2p1_0666F.1_g199440 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 1.8e-50 203.8 136 71.3
Cre03.g182150 Chlamydomonas reinhardtii HOM05D006416 ORTHO05D008054 3.4e-49 199.5 223 44.8
MCO01G659 Micromonas commoda HOM05D006416 ORTHO05D008054 3.2e-47 193.0 202 49.5
PRCOL_00003436 Prasinoderma coloniale HOM05D006416 ORTHO05D008054 9.4e-39 164.9 220 41.4
Dinv23978 Davidia involucrata HOM05D006416 ORTHO05D008054 5.7e-36 155.6 89 88.8
arahy.Tifrunner.gnm1.ann1.SGB0EA Arachis hypogaea HOM05D006416 ORTHO05D008054 8.2e-35 151.8 87 85.1
Lalb_Chr02g0148401 Lupinus albus HOM05D006416 ORTHO05D008054 1.4e-34 151.0 83 91.6
Haze_01725 Corylus avellana HOM05D006416 ORTHO05D008054 7.0e-26 122.1 64 87.5


User provided reference genes

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