Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p27030 Brassica napus HOM05D000096 ORTHO05D010037 1.1e-74 283.1 135 100.0
BolC7t42420H Brassica oleracea HOM05D000096 ORTHO05D010037 4.4e-63 244.6 176 72.2
BolC2t10807H Brassica oleracea HOM05D000096 ORTHO05D010037 4.9e-62 241.1 179 70.4
C02p47710 Brassica napus HOM05D000096 ORTHO05D010037 2.0e-55 219.2 168 67.9
C09p49170 Brassica napus HOM05D000096 ORTHO05D000045 4.9e-54 214.5 172 64.5
C05p53330 Brassica napus HOM05D000096 ORTHO05D010037 6.4e-54 214.2 166 66.3
BraA02t07903Z Brassica rapa HOM05D000096 ORTHO05D010037 6.4e-54 214.2 166 66.3
C02p27650 Brassica napus HOM05D000096 ORTHO05D010037 2.4e-53 212.2 163 66.9
C09p64170 Brassica napus HOM05D000096 ORTHO05D010037 2.4e-53 212.2 166 67.5
BolC5t33999H Brassica oleracea HOM05D000096 ORTHO05D010037 3.2e-53 211.8 171 63.7
BolC9t57766H Brassica oleracea HOM05D000096 ORTHO05D010037 4.1e-53 211.5 169 64.5
C03p63050 Brassica napus HOM05D000096 ORTHO05D010037 7.0e-53 210.7 166 65.7
A05p21280 Brassica napus HOM05D000096 ORTHO05D010037 9.2e-53 210.3 166 65.1
BraA05t21036Z Brassica rapa HOM05D000096 ORTHO05D010037 9.2e-53 210.3 166 65.1
BolC5t34006H Brassica oleracea HOM05D000096 ORTHO05D010037 2.7e-52 208.8 166 65.1
BolC5t34013H Brassica oleracea HOM05D000096 ORTHO05D010037 6.6e-51 204.1 176 61.9
BolC8t48490H Brassica oleracea HOM05D000096 ORTHO05D010037 6.6e-51 204.1 176 61.9
BolC2t09047H Brassica oleracea HOM05D000096 ORTHO05D010037 1.1e-50 203.4 166 64.5
BolC9t59254H Brassica oleracea HOM05D000096 ORTHO05D010037 3.1e-48 195.3 172 62.8
BcaC04g19160 Brassica carinata HOM05D000096 ORTHO05D010037 9.8e-47 190.3 146 69.9
BolC5t31840H Brassica oleracea HOM05D000096 ORTHO05D010037 3.2e-45 185.3 176 59.7
C05p53360 Brassica napus HOM05D000096 ORTHO05D010037 5.4e-45 184.5 176 58.0
BcaC03g15185 Brassica carinata HOM05D000096 ORTHO05D010037 7.8e-44 180.6 113 77.9
BcaB01g00798 Brassica carinata HOM05D000096 ORTHO05D010037 1.1e-42 176.8 126 71.4
BraA01t02836Z Brassica rapa HOM05D000096 ORTHO05D010037 3.6e-41 171.8 109 79.8
C07p19090 Brassica napus HOM05D000096 ORTHO05D000045 4.7e-41 171.4 138 65.2
BraA06t25745Z Brassica rapa HOM05D000096 ORTHO05D010037 1.1e-40 170.2 143 63.6
C02p27170 Brassica napus HOM05D000096 ORTHO05D010037 1.1e-37 160.2 131 64.1
C05p35860 Brassica napus HOM05D000096 ORTHO05D000045 1.1e-37 160.2 131 64.1
BcaC08g47173 Brassica carinata HOM05D000353 ORTHO05D010037 5.4e-37 157.9 157 51.0
C09p17530 Brassica napus HOM05D000096 ORTHO05D010037 7.1e-37 157.5 131 62.6
C09p23310 Brassica napus HOM05D000096 ORTHO05D010037 9.2e-37 157.1 134 61.9
A02p28680 Brassica napus HOM05D000096 ORTHO05D010037 1.6e-36 156.4 140 60.0
BcaC05g27210 Brassica carinata HOM05D000096 ORTHO05D010037 3.0e-35 152.1 123 65.9
BcaB07g31907 Brassica carinata HOM05D000096 ORTHO05D010037 7.1e-29 131.0 98 67.3
C01p30060 Brassica napus HOM05D000353 ORTHO05D000174 4.9e-22 108.2 87 62.1
A05p23810 Brassica napus HOM05D000096 ORTHO05D010037 2.4e-21 105.9 107 55.1
BcaC05g27600 Brassica carinata HOM05D000096 ORTHO05D010037 3.2e-21 105.5 101 58.4
BcaC09g50232 Brassica carinata HOM05D000096 ORTHO05D010037 3.2e-21 105.5 101 58.4
C05p53270 Brassica napus HOM05D000096 ORTHO05D010037 1.0e-19 100.5 58 79.3
BcaB03g15975 Brassica carinata HOM05D000096 ORTHO05D010037 6.2e-17 91.3 155 37.4
A09p11230 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-16 90.5 148 33.1
BcaB02g06411 Brassica carinata HOM05D000096 ORTHO05D010037 1.4e-16 90.1 103 46.6
BcaB02g11005 Brassica carinata HOM05D000096 ORTHO05D010037 3.1e-16 89.0 103 45.6
BcaB04g17265 Brassica carinata HOM05D000353 ORTHO05D000174 1.7e-14 83.2 103 42.7
BcaB05g23882 Brassica carinata HOM05D000353 ORTHO05D010037 1.1e-13 80.5 150 28.0
BolC5t32305H Brassica oleracea HOM05D041941 ORTHO05D033835 1.9e-13 79.7 35 97.1
ECA240G2426 Erigeron canadensis HOM05D000353 ORTHO05D000174 1.9e-13 79.7 133 32.3
Thhalv10026883m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.9e-13 79.7 122 34.4
BolC6t35509H Brassica oleracea HOM05D000353 ORTHO05D000174 2.4e-13 79.3 163 28.8
BcaB08g34639 Brassica carinata HOM05D000353 ORTHO05D000174 4.2e-13 78.6 151 30.5
C02p26060 Brassica napus HOM05D000353 ORTHO05D000174 5.5e-13 78.2 154 30.5
BolC1t00856H Brassica oleracea HOM05D000353 ORTHO05D010037 5.5e-13 78.2 150 28.0
BolC1t03913H Brassica oleracea HOM05D000353 ORTHO05D010037 5.5e-13 78.2 150 28.0
Thhalv10002267m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.1e-12 76.3 120 34.2
A05p27520 Brassica napus HOM05D000353 ORTHO05D000174 2.7e-12 75.9 154 30.5
A09p28970 Brassica napus HOM05D000353 ORTHO05D000174 4.6e-12 75.1 161 29.8
C05p33350 Brassica napus HOM05D000353 ORTHO05D010037 4.6e-12 75.1 150 28.7
BolC5t32061H Brassica oleracea HOM05D000353 ORTHO05D010037 4.6e-12 75.1 150 28.7
BraA09t38461Z Brassica rapa HOM05D000353 ORTHO05D000174 4.6e-12 75.1 161 29.8
Thhalv10027522m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.3e-11 73.6 129 31.8
A07p14780 Brassica napus HOM05D000353 ORTHO05D000174 2.3e-11 72.8 147 29.3
BolC2t09050H Brassica oleracea HOM05D000353 ORTHO05D000174 2.3e-11 72.8 151 28.5
BcaC09g51435 Brassica carinata HOM05D000353 ORTHO05D000174 3.0e-11 72.4 156 26.9
BolC1t01288H Brassica oleracea HOM05D000353 ORTHO05D000174 3.0e-11 72.4 156 26.9
BcaC06g36089 Brassica carinata HOM05D000353 ORTHO05D000174 3.9e-11 72.0 157 31.2
BolC5t32309H Brassica oleracea HOM05D000353 ORTHO05D000174 5.1e-11 71.6 151 28.5
BolC6t39887H Brassica oleracea HOM05D000353 ORTHO05D000174 5.1e-11 71.6 151 28.5
BolC9t55253H Brassica oleracea HOM05D000353 ORTHO05D000174 5.1e-11 71.6 121 31.4
BcaC07g37319 Brassica carinata HOM05D000353 ORTHO05D000174 6.7e-11 71.2 99 37.4
AL5G12710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 8.7e-11 70.9 150 25.3
AL6G41920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 8.7e-11 70.9 150 25.3
AL7G11640 Arabidopsis lyrata HOM05D000353 ORTHO05D010269 8.7e-11 70.9 150 25.3
A03p67580 Brassica napus HOM05D000353 ORTHO05D000174 8.7e-11 70.9 151 27.2
AL1G50710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.1e-10 70.5 150 25.3
AL1G55630 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.1e-10 70.5 150 25.3
AL2G19920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.1e-10 70.5 150 25.3
AL2G22250 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.1e-10 70.5 150 25.3
AL4G20710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.1e-10 70.5 150 25.3
AL8G21920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.1e-10 70.5 150 25.3
BolC8t47319H Brassica oleracea HOM05D000353 ORTHO05D000174 1.1e-10 70.5 119 33.6
Thhalv10002946m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.1e-10 70.5 109 32.1
BcaC05g27207 Brassica carinata HOM05D000353 ORTHO05D000174 1.5e-10 70.1 119 32.8
BcaC05g27394 Brassica carinata HOM05D000096 ORTHO05D010037 1.5e-10 70.1 78 41.0
BolC5t31838H Brassica oleracea HOM05D000353 ORTHO05D000174 1.5e-10 70.1 119 32.8
A06p13610 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-10 69.7 121 31.4
C03p18660 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-10 69.7 158 28.5
C09p17500 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-10 69.7 151 27.2
BolC4t26686H Brassica oleracea HOM05D000353 ORTHO05D000174 1.9e-10 69.7 151 27.2
C05p35900 Brassica napus HOM05D000353 ORTHO05D000174 2.5e-10 69.3 151 27.8
Carub.0008s0745 Capsella rubella HOM05D000353 ORTHO05D000174 2.5e-10 69.3 133 27.8
A01p09370 Brassica napus HOM05D000096 ORTHO05D010037 3.3e-10 68.9 80 42.5
C01p13750 Brassica napus HOM05D000096 ORTHO05D010037 3.3e-10 68.9 80 42.5
C02p47680 Brassica napus HOM05D000353 ORTHO05D000174 3.3e-10 68.9 121 30.6
C03p74460 Brassica napus HOM05D000096 ORTHO05D010037 3.3e-10 68.9 80 42.5
BolC2t10805H Brassica oleracea HOM05D000353 ORTHO05D010037 3.3e-10 68.9 119 32.8
BcaB01g01096 Brassica carinata HOM05D000096 ORTHO05D010037 4.3e-10 68.6 102 37.3
A05p21320 Brassica napus HOM05D000353 ORTHO05D000174 4.3e-10 68.6 151 27.8
BolC5t34017H Brassica oleracea HOM05D000353 ORTHO05D000174 4.3e-10 68.6 151 26.5
Thhalv10029126m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 4.3e-10 68.6 153 27.5
A02p32050 Brassica napus HOM05D000353 ORTHO05D000174 5.6e-10 68.2 158 27.8
C09p27100 Brassica napus HOM05D000353 ORTHO05D000174 5.6e-10 68.2 158 27.8
BolC4t25352H Brassica oleracea HOM05D000353 ORTHO05D000174 5.6e-10 68.2 126 32.5
BraA02t08216Z Brassica rapa HOM05D000353 ORTHO05D000174 5.6e-10 68.2 158 27.8
Thhalv10029348m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 7.4e-10 67.8 175 25.7
A01p18290 Brassica napus HOM05D000353 ORTHO05D000174 9.6e-10 67.4 133 33.1
C09p23350 Brassica napus HOM05D000353 ORTHO05D000174 9.6e-10 67.4 117 33.3
AL9U11500 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.3e-09 67.0 145 25.5
BcaC08g43102 Brassica carinata HOM05D000353 ORTHO05D000174 1.3e-09 67.0 99 35.4
C03p63100 Brassica napus HOM05D000353 ORTHO05D000174 1.3e-09 67.0 151 26.5
C06p03710 Brassica napus HOM05D000353 ORTHO05D010037 1.3e-09 67.0 99 35.4
C05p53390 Brassica napus HOM05D000353 ORTHO05D010037 1.6e-09 66.6 117 33.3
BcaB08g34954 Brassica carinata HOM05D000353 ORTHO05D000174 2.1e-09 66.2 157 27.4
A02p28640 Brassica napus HOM05D000353 ORTHO05D000174 2.1e-09 66.2 117 32.5
C09p45320 Brassica napus HOM05D000353 ORTHO05D000174 2.1e-09 66.2 153 27.5
Thhalv10000133m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.1e-09 66.2 172 23.8
Thhalv10026854m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.1e-09 66.2 125 30.4
Thhalv10000499m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.8e-09 65.9 175 24.0
BcaC02g07613 Brassica carinata HOM05D000353 ORTHO05D000174 3.7e-09 65.5 157 28.0
A01p31990 Brassica napus HOM05D000353 ORTHO05D013802 3.7e-09 65.5 87 37.9
BcaB05g22552 Brassica carinata HOM05D000353 ORTHO05D000174 4.8e-09 65.1 158 25.9
A03p66100 Brassica napus HOM05D000353 ORTHO05D000174 4.8e-09 65.1 157 28.7
A05p24550 Brassica napus HOM05D000353 ORTHO05D000174 4.8e-09 65.1 157 28.7
BolC5t34002H Brassica oleracea HOM05D000353 ORTHO05D000174 4.8e-09 65.1 151 25.8
Thhalv10000424m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 4.8e-09 65.1 175 25.1
AT1G36510 Arabidopsis thaliana HOM05D000353 ORTHO05D010037 6.2e-09 64.7 132 29.5
BraA01t02710Z Brassica rapa HOM05D000353 ORTHO05D000174 6.2e-09 64.7 87 37.9
BraA05t21040Z Brassica rapa HOM05D000353 ORTHO05D000174 6.2e-09 64.7 148 27.7
C05p32800 Brassica napus HOM05D000353 ORTHO05D000174 1.1e-08 63.9 157 26.8
BolC2t10352H Brassica oleracea HOM05D000353 ORTHO05D000174 1.1e-08 63.9 157 28.0
BraA09t40707Z Brassica rapa HOM05D000353 ORTHO05D000174 1.1e-08 63.9 157 28.0
Carub.0008s0742 Capsella rubella HOM05D000353 ORTHO05D010037 1.1e-08 63.9 147 26.5
A07p36560 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-08 63.5 157 27.4
C06p15640 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-08 63.5 157 27.4
BcaC02g09046 Brassica carinata HOM05D000353 ORTHO05D000174 1.8e-08 63.2 128 32.0
BraA02t07899Z Brassica rapa HOM05D000353 ORTHO05D000174 1.8e-08 63.2 87 36.8
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 1.8e-08 63.2 127 28.3
AT2G05642 Arabidopsis thaliana HOM05D000353 ORTHO05D000174 2.4e-08 62.8 166 27.7
BcaC01g00750 Brassica carinata HOM05D000353 ORTHO05D000174 2.4e-08 62.8 143 31.5
BcaNung06211 Brassica carinata HOM05D000353 ORTHO05D000174 2.4e-08 62.8 151 26.5
Peaxi162Scf11584g00003 Petunia axillaris HOM05D002441 ORTHO05D002376 2.4e-08 62.8 156 25.6
BcaB01g01518 Brassica carinata HOM05D000353 ORTHO05D000174 3.1e-08 62.4 85 38.8
BcaB02g11010 Brassica carinata HOM05D000353 ORTHO05D000174 3.1e-08 62.4 157 28.7
C09p64200 Brassica napus HOM05D000353 ORTHO05D000174 3.1e-08 62.4 87 36.8
BolC9t59257H Brassica oleracea HOM05D000353 ORTHO05D000174 3.1e-08 62.4 87 36.8
Thhalv10002212m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.1e-08 62.4 86 40.7
Thhalv10029167m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.1e-08 62.4 173 24.9
BolC3t20719H Brassica oleracea HOM05D000353 ORTHO05D000174 4.0e-08 62.0 148 29.1
Carub.0001s3687 Capsella rubella HOM05D000353 ORTHO05D000174 4.0e-08 62.0 149 25.5
Thhalv10028256m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 4.0e-08 62.0 172 22.1
Thhalv10002301m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 5.3e-08 61.6 170 24.7
Os07g0190600 Oryza sativa ssp. japonica HOM05D008312 ORTHO05D007430 5.3e-08 61.6 110 30.9
SGA_v2.0_scaffold53G19410 Striga asiatica HOM05D002090 ORTHO05D000174 6.9e-08 61.2 139 31.7
Nitab4.5_0000992g0110 Nicotiana tabacum HOM05D002441 ORTHO05D002376 9.0e-08 60.8 143 25.9
CAN.G1305.28 Capsicum annuum HOM05D002441 ORTHO05D002376 2.0e-07 59.7 145 26.9
Thhalv10029208m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 2.0e-07 59.7 86 37.2
AL5G11810 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 2.6e-07 59.3 166 26.5
BcaC02g08853 Brassica carinata HOM05D000353 ORTHO05D000174 2.6e-07 59.3 138 27.5
C06p22090 Brassica napus HOM05D000353 ORTHO05D000174 3.4e-07 58.9 151 27.8
C07p07970 Brassica napus HOM05D000353 ORTHO05D000174 3.4e-07 58.9 129 31.0
BolC6t37396H Brassica oleracea HOM05D000353 ORTHO05D000174 3.4e-07 58.9 151 27.8
BolC7t41214H Brassica oleracea HOM05D000353 ORTHO05D000174 3.4e-07 58.9 129 31.0
Peaxi162Scf00005g02517 Petunia axillaris HOM05D002907 ORTHO05D005554 3.4e-07 58.9 138 28.3
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 3.4e-07 58.9 138 28.3
BcaC02g10672 Brassica carinata HOM05D000353 ORTHO05D000174 4.5e-07 58.5 124 30.6
BcaC05g29108 Brassica carinata HOM05D000096 ORTHO05D010037 4.5e-07 58.5 77 46.8
C04p26530 Brassica napus HOM05D000353 ORTHO05D000174 4.5e-07 58.5 124 30.6
BolC4t24150H Brassica oleracea HOM05D000353 ORTHO05D000174 4.5e-07 58.5 124 30.6
BraA01t02840Z Brassica rapa HOM05D000353 ORTHO05D000174 4.5e-07 58.5 127 29.1
Carub.0007s3602 Capsella rubella HOM05D000353 ORTHO05D000174 5.8e-07 58.2 156 26.3
HanXRQChr13g0387501 Helianthus annuus HOM05D003964 ORTHO05D000174 5.8e-07 58.2 159 25.2
BcaNung06852 Brassica carinata HOM05D000353 ORTHO05D000174 7.6e-07 57.8 63 42.9
CAN.G419.22 Capsicum annuum HOM05D002907 ORTHO05D005554 1.0e-06 57.4 106 25.5
Nitab4.5_0026419g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.0e-06 57.4 144 25.0
Thhalv10015289m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 1.3e-06 57.0 153 25.5
BraA05t22072Z Brassica rapa HOM05D000353 ORTHO05D000174 1.7e-06 56.6 156 25.6
Nitab4.5_0007040g0020 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.7e-06 56.6 121 27.3
AL1G48730 Arabidopsis lyrata HOM05D000353 ORTHO05D031316 2.2e-06 56.2 119 29.4
BcaB06g27108 Brassica carinata HOM05D000353 ORTHO05D000174 2.2e-06 56.2 157 24.2
C05p49080 Brassica napus HOM05D000353 ORTHO05D000174 2.2e-06 56.2 152 26.3
QL04p076347 Quercus lobata HOM05D002907 ORTHO05D000065 2.2e-06 56.2 133 27.8
QL93p0160_0004 Quercus lobata HOM05D002907 ORTHO05D000065 2.2e-06 56.2 133 27.8
A07p36550 Brassica napus HOM05D000353 ORTHO05D000174 2.9e-06 55.8 151 26.5
BolC8t46849H Brassica oleracea HOM05D000353 ORTHO05D018805 3.8e-06 55.5 74 36.5
ECA248G1544 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.8e-06 55.5 150 25.3
Thhalv10029440m.g Eutrema salsugineum HOM05D000353 ORTHO05D000174 3.8e-06 55.5 156 24.4
C08p07580 Brassica napus HOM05D000353 ORTHO05D000174 4.9e-06 55.1 82 35.4
C09p49200 Brassica napus HOM05D000353 ORTHO05D000174 4.9e-06 55.1 120 26.7
Carub.0025s0004 Capsella rubella HOM05D000353 ORTHO05D000174 4.9e-06 55.1 155 23.9
C02p27610 Brassica napus HOM05D000353 ORTHO05D000174 6.5e-06 54.7 86 34.9
BcaB03g14381 Brassica carinata HOM05D000353 ORTHO05D000174 8.4e-06 54.3 125 29.6
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 8.4e-06 54.3 151 25.2
A03p66220 Brassica napus HOM05D000353 ORTHO05D000174 8.4e-06 54.3 134 26.1
BraA03t15675Z Brassica rapa HOM05D000353 ORTHO05D000174 8.4e-06 54.3 134 26.1
ECA247G2253 Erigeron canadensis HOM05D000096 ORTHO05D000045 8.4e-06 54.3 140 23.6
Peaxi162Scf00385g00619 Petunia axillaris HOM05D002441 ORTHO05D002376 8.4e-06 54.3 147 24.5


User provided reference genes

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