Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p26930 Brassica napus HOM05D008596 ORTHO05D003268 1.5e-180 636.0 303 100.0
BraA06t25464Z Brassica rapa HOM05D008596 ORTHO05D003268 7.4e-151 537.3 297 87.9
A08p08190 Brassica napus HOM05D008596 ORTHO05D003268 3.9e-120 435.3 294 73.8
A03p66670 Brassica napus HOM05D008596 ORTHO05D003268 1.6e-108 396.7 256 80.1
A05p19660 Brassica napus HOM05D008596 ORTHO05D003268 2.8e-102 375.9 276 70.7
A05p23070 Brassica napus HOM05D008596 ORTHO05D003268 4.8e-102 375.2 241 80.1
A06p24280 Brassica napus HOM05D008596 ORTHO05D003268 5.4e-101 371.7 241 80.1
A06p25180 Brassica napus HOM05D008596 ORTHO05D003268 5.4e-101 371.7 241 80.1
A03p68840 Brassica napus HOM05D008596 ORTHO05D003268 1.0e-83 314.3 178 87.1
BraSC39t46179Z Brassica rapa HOM05D008596 ORTHO05D003268 1.0e-83 314.3 178 87.1
A06p23500 Brassica napus HOM05D008596 ORTHO05D003268 2.2e-78 296.6 253 62.1
BraA05t21116Z Brassica rapa HOM05D008596 ORTHO05D003268 2.3e-72 276.6 297 52.9
BraA05t18958Z Brassica rapa HOM05D008596 ORTHO05D003268 1.5e-71 273.9 297 51.9
A01p26540 Brassica napus HOM05D003421 ORTHO05D003268 5.6e-66 255.4 145 86.9
A05p24140 Brassica napus HOM05D008596 ORTHO05D003268 6.4e-62 241.9 294 47.3
BraA06t25541Z Brassica rapa HOM05D008596 ORTHO05D003268 1.9e-50 203.8 260 45.8
A05p29660 Brassica napus HOM05D008596 ORTHO05D003268 4.0e-48 196.1 294 43.2
BcaC04g20964 Brassica carinata HOM05D003421 ORTHO05D003268 1.3e-46 191.0 293 38.9
BolC3t19281H Brassica oleracea HOM05D003421 ORTHO05D003268 1.2e-44 184.5 293 35.8
BolC2t09439H Brassica oleracea HOM05D003421 ORTHO05D003268 2.1e-41 173.7 216 42.1
BolC4t23765H Brassica oleracea HOM05D003421 ORTHO05D003268 4.8e-41 172.6 223 41.3
BolC9t56870H Brassica oleracea HOM05D003421 ORTHO05D003268 1.1e-40 171.4 293 37.9
BolC5t33453H Brassica oleracea HOM05D003421 ORTHO05D003268 1.8e-40 170.6 235 37.9
BolC1t03978H Brassica oleracea HOM05D003421 ORTHO05D003268 9.0e-40 168.3 210 42.9
BolC8t48271H Brassica oleracea HOM05D003421 ORTHO05D003268 1.2e-39 167.9 257 40.1
C05p36500 Brassica napus HOM05D008596 ORTHO05D003268 4.5e-39 166.0 94 83.0
BraA03t15718Z Brassica rapa HOM05D008596 ORTHO05D003268 2.9e-38 163.3 109 75.2
BraA01t02722Z Brassica rapa HOM05D003421 ORTHO05D003268 1.1e-37 161.4 282 35.1
BolC9t56748H Brassica oleracea HOM05D003421 ORTHO05D003268 6.7e-35 152.1 232 36.2
BolC4t25137H Brassica oleracea HOM05D003421 ORTHO05D003268 2.5e-34 150.2 295 33.2
C05p36560 Brassica napus HOM05D003421 ORTHO05D003268 5.6e-34 149.1 97 79.4
BraA02t07722Z Brassica rapa HOM05D008596 ORTHO05D003268 6.2e-33 145.6 101 70.3
BcaC09g48540 Brassica carinata HOM05D008596 ORTHO05D003268 1.4e-32 144.4 93 74.2
BolC2t09874H Brassica oleracea HOM05D003421 ORTHO05D003268 1.4e-32 144.4 255 33.7
BolC3t19358H Brassica oleracea HOM05D003421 ORTHO05D003268 1.4e-32 144.4 255 33.3
BolC8t47514H Brassica oleracea HOM05D003421 ORTHO05D003268 2.4e-32 143.7 297 30.6
BraA06t25539Z Brassica rapa HOM05D008596 ORTHO05D003268 5.3e-32 142.5 74 90.5
A10p07860 Brassica napus HOM05D008596 ORTHO05D003268 6.9e-32 142.1 97 75.3
BraSC35t46014Z Brassica rapa HOM05D008596 ORTHO05D003268 6.9e-32 142.1 97 75.3
C05p36160 Brassica napus HOM05D008596 ORTHO05D003268 9.0e-32 141.7 100 70.0
BolC2t10401H Brassica oleracea HOM05D007986 ORTHO05D003268 9.0e-32 141.7 173 42.8
A09p30520 Brassica napus HOM05D008596 ORTHO05D003268 1.5e-31 141.0 104 67.3
BolC5t31599H Brassica oleracea HOM05D007986 ORTHO05D013025 4.5e-31 139.4 252 34.1
BolC2t10336H Brassica oleracea HOM05D003421 ORTHO05D003268 2.2e-30 137.1 153 43.1
BcaC07g37480 Brassica carinata HOM05D007986 ORTHO05D003268 6.0e-28 129.0 110 51.8
BolC1t03345H Brassica oleracea HOM05D003421 ORTHO05D003268 3.3e-26 123.2 143 44.1
BolC4t24275H Brassica oleracea HOM05D007986 ORTHO05D003268 3.3e-26 123.2 252 32.9
BolC3t19165H Brassica oleracea HOM05D003421 ORTHO05D003268 4.3e-26 122.9 217 33.6
BolC9t56013H Brassica oleracea HOM05D003421 ORTHO05D003268 2.8e-25 120.2 221 35.3
BolC7t42918H Brassica oleracea HOM05D003421 ORTHO05D003268 2.0e-23 114.0 147 40.8
BolC8t47709H Brassica oleracea HOM05D003421 ORTHO05D003268 3.4e-23 113.2 160 37.5
C03p67380 Brassica napus HOM05D008596 ORTHO05D027031 3.8e-22 109.8 294 30.6
BolC5t31483H Brassica oleracea HOM05D028664 ORTHO05D032055 5.0e-22 109.4 88 55.7
BolC4t24296H Brassica oleracea HOM05D003421 ORTHO05D003268 3.2e-21 106.7 97 48.5
BNapus_Darmor_BZH_scaffold_65p00030 Brassica napus HOM05D027739 ORTHO05D024662 5.5e-21 105.9 101 60.4
BolC3t19084H Brassica oleracea HOM05D003421 ORTHO05D003268 1.2e-20 104.8 121 43.8
BolC1t03331H Brassica oleracea HOM05D007986 ORTHO05D013025 2.1e-20 104.0 185 35.7
BolC7t42082H Brassica oleracea HOM05D003421 ORTHO05D003268 1.8e-19 100.9 230 33.0
BNapus_Darmor_BZH_scaffold_294p00010 Brassica napus HOM05D008596 ORTHO05D003268 3.9e-19 99.8 47 89.4
A03p66770 Brassica napus HOM05D008596 ORTHO05D003268 1.5e-18 97.8 65 78.5
BcaC05g27617 Brassica carinata HOM05D007986 ORTHO05D003268 4.3e-18 96.3 93 47.3
A01p26840 Brassica napus HOM05D008596 ORTHO05D003268 3.7e-17 93.2 64 75.0
AT2G15420 Arabidopsis thaliana HOM05D010629 ORTHO05D005680 6.3e-17 92.4 172 31.4
BraA09t38671Z Brassica rapa HOM05D003421 ORTHO05D043141 6.3e-17 92.4 106 41.5
BcaC08g43964 Brassica carinata HOM05D003421 ORTHO05D003268 1.4e-16 91.3 146 37.7
BolC8t48644H Brassica oleracea HOM05D002078 ORTHO05D005680 1.8e-16 90.9 151 33.1
Sp7g05200 Schrenkiella parvula HOM05D002078 ORTHO05D005680 1.8e-16 90.9 158 29.1
BolC5t32328H Brassica oleracea HOM05D007986 ORTHO05D003268 5.3e-16 89.4 93 45.2
Carub.0108s0001 Capsella rubella HOM05D016834 ORTHO05D016863 5.3e-16 89.4 239 25.5
Sp4g11160 Schrenkiella parvula HOM05D010772 ORTHO05D005680 6.9e-16 89.0 173 32.4
BolC7t42956H Brassica oleracea HOM05D003421 ORTHO05D042986 2.6e-15 87.0 105 41.0
BcaC06g35968 Brassica carinata HOM05D003421 ORTHO05D003268 4.5e-15 86.3 141 33.3
BolC4t23987H Brassica oleracea HOM05D003421 ORTHO05D003268 4.5e-15 86.3 72 50.0
Carub.0003s2394 Capsella rubella HOM05D016834 ORTHO05D016863 4.5e-15 86.3 239 25.5
AL3G43600 Arabidopsis lyrata HOM05D010629 ORTHO05D005680 5.9e-15 85.9 150 29.3
Carub.0008s1221 Capsella rubella HOM05D016834 ORTHO05D016863 1.0e-14 85.1 239 25.5
AT1G20400 Arabidopsis thaliana HOM05D011598 ORTHO05D013181 1.3e-14 84.7 155 29.0
Carub.0009s0003 Capsella rubella HOM05D016834 ORTHO05D016863 2.2e-14 84.0 239 24.7
Carub.0003s2886 Capsella rubella HOM05D016834 ORTHO05D016863 2.9e-14 83.6 185 27.0
Sp7g11540 Schrenkiella parvula HOM05D010529 ORTHO05D012528 1.1e-13 81.6 124 33.1
Sp4g04860 Schrenkiella parvula HOM05D010772 ORTHO05D005680 1.9e-13 80.9 160 32.5
Carub.0006s2612 Capsella rubella HOM05D016834 ORTHO05D016863 3.2e-13 80.1 172 27.3
AT4G32200 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 4.2e-13 79.7 130 34.6
BolC2t10518H Brassica oleracea HOM05D008596 ORTHO05D041475 5.5e-13 79.3 171 30.4
AT3G42060 Arabidopsis thaliana HOM05D010629 ORTHO05D005680 7.2e-13 79.0 184 25.5
Carub.0002s1244 Capsella rubella HOM05D010629 ORTHO05D005680 1.6e-12 77.8 153 26.8
Carub.0353s0001 Capsella rubella HOM05D010629 ORTHO05D005680 1.6e-12 77.8 154 27.3
BolC3t19083H Brassica oleracea HOM05D007986 ORTHO05D003268 2.1e-12 77.4 160 33.1
Carub.0006s0276 Capsella rubella HOM05D010629 ORTHO05D005680 2.1e-12 77.4 153 26.1
Carub.0073s0002 Capsella rubella HOM05D016834 ORTHO05D016863 2.1e-12 77.4 239 24.3
BcaC06g35963 Brassica carinata HOM05D008596 ORTHO05D031778 2.7e-12 77.0 42 88.1
BolC5t32276H Brassica oleracea HOM05D008596 ORTHO05D024662 3.6e-12 76.6 89 52.8
Carub.0005s0210 Capsella rubella HOM05D010629 ORTHO05D005680 3.6e-12 76.6 154 27.3
Carub.0007s2123 Capsella rubella HOM05D010629 ORTHO05D005680 4.7e-12 76.3 153 26.1
Carub.0007s3091 Capsella rubella HOM05D016834 ORTHO05D016863 1.0e-11 75.1 239 23.8
CARHR115630 Cardamine hirsuta HOM05D008458 ORTHO05D010628 1.4e-11 74.7 225 24.0
AL1G53160 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 2.3e-11 73.9 163 25.2
AL3G15920 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 2.3e-11 73.9 163 25.2
C02p44760 Brassica napus HOM05D008596 ORTHO05D041475 3.0e-11 73.6 71 49.3
BcaB03g16313 Brassica carinata HOM05D008969 ORTHO05D003268 3.9e-11 73.2 99 39.4
C03p67400 Brassica napus HOM05D008596 ORTHO05D027031 3.9e-11 73.2 201 27.9
C08p08930 Brassica napus HOM05D008596 ORTHO05D032749 1.1e-10 71.6 52 61.5
Carub.0008s0728 Capsella rubella HOM05D009492 ORTHO05D011693 1.1e-10 71.6 135 28.1
Carub.0007s3050 Capsella rubella HOM05D010629 ORTHO05D005680 1.5e-10 71.2 137 27.0
BolC8t47737H Brassica oleracea HOM05D008596 ORTHO05D032749 2.6e-10 70.5 52 61.5
Carub.0003s2807 Capsella rubella HOM05D010629 ORTHO05D005680 2.6e-10 70.5 103 32.0
AL1G50390 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 3.3e-10 70.1 139 28.1
CARHR184520 Cardamine hirsuta HOM05D008458 ORTHO05D010628 5.7e-10 69.3 147 28.6
Carub.0072s0001 Capsella rubella HOM05D010629 ORTHO05D005680 7.4e-10 68.9 103 32.0
SpUn0003_0260 Schrenkiella parvula HOM05D010529 ORTHO05D012528 9.7e-10 68.6 90 33.3
BcaC01g04584 Brassica carinata HOM05D002078 ORTHO05D005680 1.7e-09 67.8 145 26.9
AL7G45790 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 2.8e-09 67.0 163 24.5
BcaC06g36330 Brassica carinata HOM05D003421 ORTHO05D003268 2.8e-09 67.0 170 32.9
Sp4g04760 Schrenkiella parvula HOM05D010772 ORTHO05D005680 4.8e-09 66.2 94 29.8
BolC6t36259H Brassica oleracea HOM05D003421 ORTHO05D043141 1.1e-08 65.1 94 39.4
BcaC01g03754 Brassica carinata HOM05D002078 ORTHO05D005680 1.4e-08 64.7 145 25.5
BcaC03g17686 Brassica carinata HOM05D002078 ORTHO05D005680 1.4e-08 64.7 145 24.8
BcaNung05737 Brassica carinata HOM05D008969 ORTHO05D012202 1.4e-08 64.7 157 28.7
BcaC06g36792 Brassica carinata HOM05D003421 ORTHO05D003268 2.4e-08 63.9 171 32.7
BcaC09g49745 Brassica carinata HOM05D006121 ORTHO05D009559 2.4e-08 63.9 158 24.7
Sp6g10630 Schrenkiella parvula HOM05D010529 ORTHO05D012528 2.4e-08 63.9 104 29.8
AL4G17450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.1e-08 63.5 149 23.5
BcaC01g02176 Brassica carinata HOM05D008596 ORTHO05D027031 3.1e-08 63.5 127 37.8
BcaC05g27675 Brassica carinata HOM05D006121 ORTHO05D009559 3.1e-08 63.5 245 23.7
BolC2t10278H Brassica oleracea HOM05D003421 ORTHO05D003268 3.1e-08 63.5 67 43.3
Carub.0002s0942 Capsella rubella HOM05D009492 ORTHO05D011693 3.1e-08 63.5 157 24.2
Carub.0002s1012 Capsella rubella HOM05D010629 ORTHO05D005680 3.1e-08 63.5 90 30.0
AL9U10230 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.1e-08 63.2 162 22.8
BcaC03g16524 Brassica carinata HOM05D007986 ORTHO05D003268 4.1e-08 63.2 151 29.1
BcaC09g49293 Brassica carinata HOM05D002078 ORTHO05D005680 4.1e-08 63.2 167 26.3
AL3G37710 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.3e-08 62.8 162 22.8
AL4G24140 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 7.0e-08 62.4 162 22.2
AL9U10150 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 7.0e-08 62.4 132 24.2
BcaC02g10452 Brassica carinata HOM05D002078 ORTHO05D005680 7.0e-08 62.4 145 25.5
BolC4t24051H Brassica oleracea HOM05D007986 ORTHO05D003268 7.0e-08 62.4 48 50.0
AL3G38160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 9.1e-08 62.0 162 22.2
AL5G23160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 9.1e-08 62.0 162 22.2
BcaC08g44804 Brassica carinata HOM05D002078 ORTHO05D005680 9.1e-08 62.0 147 27.9
AL6G42690 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.2e-07 61.6 162 22.8
AL6G47370 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.2e-07 61.6 162 22.2
AT5G32590 Arabidopsis thaliana HOM05D008458 ORTHO05D010628 1.2e-07 61.6 109 27.5
Carub.0004s1088 Capsella rubella HOM05D010629 ORTHO05D005680 1.2e-07 61.6 90 27.8
Carub.0007s3731 Capsella rubella HOM05D009492 ORTHO05D011693 1.2e-07 61.6 131 25.2
Cpa.g.sc94.47 Carica papaya HOM05D004287 ORTHO05D004569 1.2e-07 61.6 133 27.8
AL1G61970 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.5e-07 61.2 162 21.6
AL2G18400 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.5e-07 61.2 166 25.3
AL8G11870 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.5e-07 61.2 166 25.3
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.5e-07 61.2 162 21.6
AT4G03830 Arabidopsis thaliana HOM05D009492 ORTHO05D011693 1.5e-07 61.2 133 21.8
BcaC02g09798 Brassica carinata HOM05D002078 ORTHO05D005680 1.5e-07 61.2 145 24.1
BcaC02g10668 Brassica carinata HOM05D002078 ORTHO05D005680 1.5e-07 61.2 165 27.9
BcaC02g10758 Brassica carinata HOM05D003421 ORTHO05D003268 1.5e-07 61.2 57 49.1
BcaC04g21351 Brassica carinata HOM05D002078 ORTHO05D005680 1.5e-07 61.2 147 27.9
BcaC06g35850 Brassica carinata HOM05D002078 ORTHO05D005680 1.5e-07 61.2 145 24.8
AL6G45550 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.0e-07 60.8 162 21.6
BcaC06g34587 Brassica carinata HOM05D002078 ORTHO05D005680 2.0e-07 60.8 145 30.3
AL4G14310 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 2.6e-07 60.5 162 22.8
BcaC05g26934 Brassica carinata HOM05D002078 ORTHO05D005680 2.6e-07 60.5 145 24.8
BcaC05g27552 Brassica carinata HOM05D002078 ORTHO05D005680 2.6e-07 60.5 162 25.3
BolC8t47641H Brassica oleracea HOM05D002078 ORTHO05D005680 2.6e-07 60.5 150 25.3
AL1G47450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.4e-07 60.1 162 21.6
BcaC03g16508 Brassica carinata HOM05D002078 ORTHO05D005680 3.4e-07 60.1 123 26.8
BcaC05g27420 Brassica carinata HOM05D002078 ORTHO05D005680 3.4e-07 60.1 145 23.4
BcaC08g43200 Brassica carinata HOM05D002078 ORTHO05D005680 3.4e-07 60.1 124 25.8
Carub.0002s0975 Capsella rubella HOM05D009492 ORTHO05D011693 3.4e-07 60.1 134 24.6
CARHR105800 Cardamine hirsuta HOM05D008458 ORTHO05D010628 3.4e-07 60.1 91 33.0
AL1G65160 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 4.5e-07 59.7 162 21.6
BolC8t47961H Brassica oleracea HOM05D007986 ORTHO05D039790 4.5e-07 59.7 47 57.4
AL2G23360 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.9e-07 59.3 162 22.2
AL5G12240 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 5.9e-07 59.3 162 21.6
BcaC04g20847 Brassica carinata HOM05D008969 ORTHO05D012202 5.9e-07 59.3 127 30.7
AL3G49830 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 7.7e-07 58.9 132 23.5
AL8G45410 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 7.7e-07 58.9 163 21.5
BcaB07g33058 Brassica carinata HOM05D003421 ORTHO05D003268 7.7e-07 58.9 52 50.0
C08p07900 Brassica napus HOM05D002078 ORTHO05D005680 7.7e-07 58.9 224 25.9
Sp5g17660 Schrenkiella parvula HOM05D010529 ORTHO05D012528 7.7e-07 58.9 75 34.7
BcaC03g17295 Brassica carinata HOM05D003421 ORTHO05D003268 1.0e-06 58.5 66 42.4
BcaC05g29106 Brassica carinata HOM05D008969 ORTHO05D012202 1.0e-06 58.5 128 29.7
Carub.0005s0956 Capsella rubella HOM05D009492 ORTHO05D011693 1.0e-06 58.5 134 23.9
TWI14G0077 Tripterygium wilfordii HOM05D015010 ORTHO05D000116 1.0e-06 58.5 144 25.7
Zm00001eb375230 Zea mays HOM05D004287 ORTHO05D000116 1.0e-06 58.5 128 30.5
AL1G57330 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 1.3e-06 58.2 166 24.7
BcaC09g50043 Brassica carinata HOM05D002078 ORTHO05D005680 1.3e-06 58.2 124 25.8
BcaC04g20801 Brassica carinata HOM05D002078 ORTHO05D005680 1.7e-06 57.8 145 24.1
BcaC03g16521 Brassica carinata HOM05D006121 ORTHO05D009559 2.2e-06 57.4 160 25.0
BcaC05g26653 Brassica carinata HOM05D009676 ORTHO05D005680 2.2e-06 57.4 81 28.4
BcaC06g35883 Brassica carinata HOM05D002078 ORTHO05D005680 2.2e-06 57.4 124 29.0
BcaC07g37147 Brassica carinata HOM05D006121 ORTHO05D009559 2.2e-06 57.4 150 25.3
Carub.0007s3611 Capsella rubella HOM05D009492 ORTHO05D011693 2.2e-06 57.4 134 23.1
Thhalv10023163m.g Eutrema salsugineum HOM05D010629 ORTHO05D016863 2.2e-06 57.4 82 31.7
ECA246G0460 Erigeron canadensis HOM05D005282 ORTHO05D002071 2.9e-06 57.0 124 29.8
BcaC07g37549 Brassica carinata HOM05D008969 ORTHO05D012202 3.8e-06 56.6 166 30.1
BcaC04g21502 Brassica carinata HOM05D006121 ORTHO05D009559 5.0e-06 56.2 129 24.0
BcaC09g49729 Brassica carinata HOM05D006121 ORTHO05D009559 6.5e-06 55.8 158 24.1
BcaC07g37583 Brassica carinata HOM05D008969 ORTHO05D012202 8.5e-06 55.5 166 30.1


User provided reference genes

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