Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 1.5e-34 149.1 79 100.0
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 5.6e-26 120.6 76 82.9
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 5.6e-26 120.6 76 82.9
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 5.6e-26 120.6 76 82.9
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 1.6e-25 119.0 76 80.3
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 1.6e-25 119.0 76 80.3
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 1.6e-25 119.0 76 80.3
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 2.8e-25 118.2 76 81.6
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 6.2e-25 117.1 76 80.3
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 8.1e-25 116.7 76 78.9
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 8.1e-25 116.7 76 78.9
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 1.1e-24 116.3 76 80.3
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 1.4e-24 115.9 74 77.0
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 4.0e-24 114.4 76 75.0
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 4.0e-24 114.4 76 75.0
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 6.9e-24 113.6 76 73.7
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 6.9e-24 113.6 72 73.6
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 6.9e-24 113.6 76 73.7
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 9.0e-24 113.2 76 72.4
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 1.2e-23 112.8 76 71.1
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 1.5e-23 112.5 74 74.3
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 2.0e-23 112.1 74 71.6
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 2.6e-23 111.7 76 72.4
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 3.4e-23 111.3 76 69.7
Gohir.D13G152082 Gossypium hirsutum HOM05D002373 ORTHO05D008661 3.4e-23 111.3 69 76.8
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 4.4e-23 110.9 76 72.4
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 5.8e-23 110.5 76 76.3
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 5.8e-23 110.5 74 71.6
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 7.6e-23 110.2 76 71.1
Gohir.A13G147066 Gossypium hirsutum HOM05D002373 ORTHO05D008661 9.9e-23 109.8 69 76.8
Gorai.013G170900 Gossypium raimondii HOM05D002373 ORTHO05D008661 9.9e-23 109.8 69 76.8
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 1.3e-22 109.4 76 71.1
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 1.3e-22 109.4 76 69.7
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 1.7e-22 109.0 76 72.4
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 1.7e-22 109.0 76 72.4
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 2.2e-22 108.6 72 72.2
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 2.2e-22 108.6 72 75.0
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 2.9e-22 108.2 74 70.3
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 3.8e-22 107.8 76 69.7
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 6.4e-22 107.1 72 69.4
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 6.4e-22 107.1 72 69.4
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 6.4e-22 107.1 72 73.6
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 8.4e-22 106.7 76 67.1
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 8.4e-22 106.7 76 68.4
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 8.4e-22 106.7 74 70.3
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 1.1e-21 106.3 74 68.9
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 1.9e-21 105.5 76 65.8
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 2.4e-21 105.1 74 70.3
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 3.2e-21 104.8 76 67.1
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 3.2e-21 104.8 76 69.7
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 5.4e-21 104.0 74 68.9
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 7.1e-21 103.6 72 68.1
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 9.3e-21 103.2 73 68.5
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 9.3e-21 103.2 74 67.6
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 9.3e-21 103.2 76 67.1
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 9.3e-21 103.2 76 67.1
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 1.2e-20 102.8 76 65.8
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 1.2e-20 102.8 76 67.1
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 1.6e-20 102.4 76 65.8
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 2.1e-20 102.1 72 68.1
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 2.1e-20 102.1 74 70.3
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 2.7e-20 101.7 76 63.2
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 3.5e-20 101.3 72 66.7
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 3.5e-20 101.3 72 63.9
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 3.5e-20 101.3 72 65.3
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 3.5e-20 101.3 74 64.9
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 3.5e-20 101.3 78 62.8
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 3.5e-20 101.3 72 69.4
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 4.6e-20 100.9 74 66.2
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 4.6e-20 100.9 72 65.3
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 4.6e-20 100.9 72 68.1
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 4.6e-20 100.9 72 68.1
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 4.6e-20 100.9 72 68.1
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 4.6e-20 100.9 72 66.7
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 6.0e-20 100.5 72 66.7
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 6.0e-20 100.5 72 65.3
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 7.8e-20 100.1 65 72.3
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 7.8e-20 100.1 72 66.7
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 7.8e-20 100.1 72 66.7
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 1.0e-19 99.8 72 65.3
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 1.3e-19 99.4 74 64.9
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 1.3e-19 99.4 76 60.5
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 1.3e-19 99.4 72 65.3
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 1.7e-19 99.0 64 71.9
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 1.7e-19 99.0 75 62.7
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 2.3e-19 98.6 72 66.7
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 2.3e-19 98.6 72 63.9
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 2.3e-19 98.6 76 60.5
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 2.3e-19 98.6 76 63.2
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 3.0e-19 98.2 74 63.5
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 3.9e-19 97.8 74 63.5
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 3.9e-19 97.8 76 63.2
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 3.9e-19 97.8 76 60.5
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 8.7e-19 96.7 74 59.5
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 8.7e-19 96.7 75 61.3
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 1.1e-18 96.3 74 68.9
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 1.5e-18 95.9 64 68.8
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 3.3e-18 94.7 76 60.5
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 1.1e-16 89.7 66 65.2
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 1.1e-16 89.7 70 58.6
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 1.4e-16 89.4 63 65.1
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 4.0e-16 87.8 93 52.7
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 2.9e-14 81.6 63 61.9
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 1.9e-13 79.0 65 52.3
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 1.9e-13 79.0 76 55.3
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 1.8e-11 72.4 66 51.5
Atru.chr2.2601 Acer truncatum HOM05D002373 ORTHO05D013107 4.0e-08 61.2 35 74.3
C05p47850 Brassica napus HOM05D022203 ORTHO05D024331 1.5e-07 59.3 31 93.5
BolC5t33499H Brassica oleracea HOM05D022203 ORTHO05D024331 1.3e-06 56.2 31 90.3
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 1.7e-06 55.8 41 70.7
BcaC05g28656 Brassica carinata HOM05D022203 ORTHO05D024331 2.9e-06 55.1 28 89.3
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 8.4e-06 53.5 41 65.9


User provided reference genes

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