Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p26720 Brassica napus HOM05D006252 ORTHO05D007909 4.3e-99 364.8 197 100.0
BraA01t02602Z Brassica rapa HOM05D006252 ORTHO05D007909 4.3e-99 364.8 197 100.0
BcaB05g23061 Brassica carinata HOM05D006252 ORTHO05D007909 1.6e-98 362.8 197 99.5
BcaC09g49661 Brassica carinata HOM05D006252 ORTHO05D007909 1.6e-98 362.8 197 99.5
C01p34110 Brassica napus HOM05D006252 ORTHO05D007909 1.6e-98 362.8 197 99.5
BolC1t03381H Brassica oleracea HOM05D006252 ORTHO05D007909 1.6e-98 362.8 197 99.5
Sp5g16320 Schrenkiella parvula HOM05D006252 ORTHO05D007909 1.6e-93 346.3 196 94.9
Thhalv10002672m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 1.3e-87 326.6 196 89.8
AL5G23350 Arabidopsis lyrata HOM05D006252 ORTHO05D007909 6.4e-87 324.3 196 89.3
Aa31LG4G14200 Aethionema arabicum HOM05D006252 ORTHO05D007909 1.6e-85 319.7 196 86.7
AT3G44890 Arabidopsis thaliana HOM05D006252 ORTHO05D007909 1.0e-84 317.0 196 86.7
CARHR151120 Cardamine hirsuta HOM05D006252 ORTHO05D007909 1.5e-83 313.2 196 84.7
Carub.0005s1063 Capsella rubella HOM05D006252 ORTHO05D007909 4.3e-83 311.6 196 84.7
QL01p014977 Quercus lobata HOM05D006252 ORTHO05D007909 4.3e-75 285.0 196 79.1
THA.LOC104810882 Tarenaya hassleriana HOM05D006252 ORTHO05D007909 4.7e-74 281.6 195 78.5
CSS0004051 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 1.4e-73 280.0 198 76.3
CSS0044427 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 1.4e-73 280.0 198 76.3
Migut.D02295 Erythranthe guttata HOM05D006252 ORTHO05D007909 1.8e-73 279.6 197 76.6
HanXRQChr02g0055341 Helianthus annuus HOM05D006252 ORTHO05D007909 2.4e-73 279.3 199 77.4
Nitab4.5_0005665g0020 Nicotiana tabacum HOM05D006252 ORTHO05D007909 2.4e-73 279.3 190 76.3
CiPaw.13G122300 Carya illinoinensis HOM05D006252 ORTHO05D007909 8.9e-73 277.3 197 76.6
Cpa.g.sc47.1 Carica papaya HOM05D006252 ORTHO05D007909 1.2e-72 276.9 198 75.8
Ciclev10029219m.g Citrus clementina HOM05D006252 ORTHO05D007909 2.6e-72 275.8 196 75.5
Hma1.2p1_0051F.1_g029510 Hydrangea macrophylla HOM05D006252 ORTHO05D007909 2.6e-72 275.8 198 74.2
Nn6g35212 Nelumbo nucifera HOM05D006252 ORTHO05D007909 2.6e-72 275.8 195 73.8
PSO063G5667 Papaver somniferum HOM05D006252 ORTHO05D007909 3.4e-72 275.4 198 75.8
Thecc.09G298300 Theobroma cacao HOM05D006252 ORTHO05D007909 3.4e-72 275.4 196 75.0
MELO3C004995.2 Cucumis melo HOM05D006252 ORTHO05D007909 4.4e-72 275.0 199 74.9
CsaV3_1G013140 Cucumis sativus L. HOM05D006252 ORTHO05D007909 4.4e-72 275.0 199 74.4
Peaxi162Scf00983g00015 Petunia axillaris HOM05D006252 ORTHO05D007909 5.8e-72 274.6 190 76.8
Atru.chr3.3505 Acer truncatum HOM05D006252 ORTHO05D007909 9.9e-72 273.9 200 76.0
PSO339G3106 Papaver somniferum HOM05D006252 ORTHO05D007909 9.9e-72 273.9 198 75.8
Cc01_g10250 Coffea canephora HOM05D006252 ORTHO05D007909 1.7e-71 273.1 199 75.9
Cc08_g04460 Coffea canephora HOM05D006252 ORTHO05D007909 2.2e-71 272.7 199 75.4
Manes.11G152500 Manihot esculenta HOM05D006252 ORTHO05D007909 2.9e-71 272.3 195 74.9
Glyma.12G081500 Glycine max HOM05D006252 ORTHO05D007909 4.9e-71 271.6 200 75.0
Actinidia07187 Actinidia chinensis HOM05D006252 ORTHO05D007909 6.4e-71 271.2 197 73.1
COL.COLO4_19198 Corchorus olitorius HOM05D006252 ORTHO05D007909 6.4e-71 271.2 196 74.5
Gorai.009G090100 Gossypium raimondii HOM05D006252 ORTHO05D007909 1.9e-70 269.6 194 74.2
Sed0008981 Sechium edule HOM05D006252 ORTHO05D007909 1.9e-70 269.6 199 73.4
ClCG03G002460 Citrullus lanatus HOM05D006252 ORTHO05D007909 2.4e-70 269.2 199 73.9
FAN16G0084 Fragaria x ananassa HOM05D006252 ORTHO05D007909 4.2e-70 268.5 198 74.2
FAN21G1285 Fragaria x ananassa HOM05D006252 ORTHO05D007909 4.2e-70 268.5 198 74.2
FAN25G2218 Fragaria x ananassa HOM05D006252 ORTHO05D007909 4.2e-70 268.5 198 74.2
PGR102G1698 Punica granatum HOM05D006252 ORTHO05D007909 4.2e-70 268.5 197 71.6
Solyc11g066410.2 Solanum lycopersicum HOM05D006252 ORTHO05D007909 4.2e-70 268.5 192 72.9
Gohir.D05G088000 Gossypium hirsutum HOM05D006252 ORTHO05D007909 5.4e-70 268.1 194 73.7
PGSC0003DMG400000456 Solanum tuberosum HOM05D006252 ORTHO05D007909 5.4e-70 268.1 192 72.9
Glyma.11G192500 Glycine max HOM05D006252 ORTHO05D007909 7.1e-70 267.7 196 76.0
VMungo1127G0830 Vigna mungo HOM05D006252 ORTHO05D007909 7.1e-70 267.7 197 75.1
FvH4_3g30600 Fragaria vesca HOM05D006252 ORTHO05D007909 1.2e-69 266.9 198 73.7
FAN11G0619 Fragaria x ananassa HOM05D006252 ORTHO05D007909 1.2e-69 266.9 198 73.7
Gohir.A05G086700 Gossypium hirsutum HOM05D006252 ORTHO05D007909 1.2e-69 266.9 194 73.2
RcHm_v2.0_Chr5g0056671 Rosa chinensis HOM05D006252 ORTHO05D007909 1.2e-69 266.9 198 73.7
EL10Ac9g22626 Beta vulgaris HOM05D006252 ORTHO05D007909 1.6e-69 266.5 196 75.0
Sopen11g026160 Solanum pennellii HOM05D006252 ORTHO05D007909 1.6e-69 266.5 192 72.9
Lsat_1_v5_gn_6_43381 Lactuca sativa HOM05D006252 ORTHO05D007909 2.1e-69 266.2 192 74.5
TAR633G0073 Trochodendron aralioides HOM05D006252 ORTHO05D007909 2.1e-69 266.2 197 73.1
Cfa010288 Carpinus fangiana HOM05D006252 ORTHO05D007909 3.5e-69 265.4 197 73.6
Potri.004G217000 Populus trichocarpa HOM05D006252 ORTHO05D007909 3.5e-69 265.4 196 73.5
MSTRG.18705 Avicennia marina HOM05D006252 ORTHO05D007909 4.6e-69 265.0 198 72.7
Sabra04G0147700 Salix brachista HOM05D006252 ORTHO05D007909 4.6e-69 265.0 197 72.6
Lj2A1006G34 Lonicera japonica HOM05D006252 ORTHO05D007909 6.0e-69 264.6 202 71.3
ECA233G2302 Erigeron canadensis HOM05D006252 ORTHO05D007909 7.8e-69 264.2 202 72.3
Nitab4.5_0000173g0140 Nicotiana tabacum HOM05D006252 ORTHO05D007909 7.8e-69 264.2 182 75.3
CDE08G0788 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 1.0e-68 263.8 192 73.4
Phvul.011G086500 Phaseolus vulgaris HOM05D006252 ORTHO05D007909 1.3e-68 263.5 197 74.1
Sabra09G0002100 Salix brachista HOM05D006252 ORTHO05D007909 1.3e-68 263.5 199 72.4
arahy.Tifrunner.gnm1.ann1.Q498P0 Arachis hypogaea HOM05D006252 ORTHO05D007909 1.7e-68 263.1 197 73.6
AUR62014977 Chenopodium quinoa HOM05D006252 ORTHO05D007909 1.7e-68 263.1 196 73.0
Aqoxy1G01090 Aquilegia oxysepala HOM05D006252 ORTHO05D007909 6.6e-68 261.2 196 70.9
GSVIVG01031460001 Vitis vinifera HOM05D006252 ORTHO05D007909 6.6e-68 261.2 159 83.6
CDE02G0854 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 8.7e-68 260.8 192 71.9
arahy.Tifrunner.gnm1.ann1.4A8W5C Arachis hypogaea HOM05D006252 ORTHO05D007909 1.1e-67 260.4 197 73.1
SalBow6G6884 Salvia bowleyana HOM05D006252 ORTHO05D007909 1.9e-67 259.6 212 69.8
MD03G1128600 Malus domestica HOM05D006252 ORTHO05D007909 7.3e-67 257.7 197 72.1
AUR62029150 Chenopodium quinoa HOM05D006252 ORTHO05D007909 9.6e-67 257.3 196 71.4
Prupe.6G113200 Prunus persica HOM05D006252 ORTHO05D007909 1.6e-66 256.5 198 72.2
MD11G1148800 Malus domestica HOM05D006252 ORTHO05D007909 2.1e-66 256.1 197 72.1
SGA_v2.0_scaffold277G46698 Striga asiatica HOM05D006252 ORTHO05D007909 2.8e-66 255.8 199 71.9
TWI79G1340 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 2.8e-66 255.8 199 69.8
vmacro14388 Vaccinium macrocarpon HOM05D006252 ORTHO05D007909 6.2e-66 254.6 198 68.7
TWI75G0936 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 1.1e-65 253.8 197 70.1
ATR0043G002 Amborella trichopoda HOM05D006252 ORTHO05D007909 1.8e-65 253.1 159 81.8
Lj3g0021853 Lotus japonicus HOM05D006252 ORTHO05D007909 1.8e-65 253.1 197 70.1
Medtr4g057210 Medicago truncatula HOM05D006252 ORTHO05D007909 1.8e-65 253.1 197 70.6
unitig_746.g26615 Utricularia gibba HOM05D006252 ORTHO05D007909 1.8e-65 253.1 197 71.6
Ca_19323_v3 Cicer arietinum L. HOM05D006252 ORTHO05D007909 4.0e-65 251.9 200 69.5
HPP92_003365 Vanilla planifolia HOM05D006252 ORTHO05D007909 1.2e-64 250.4 197 67.0
Lalb_Chr19g0136901 Lupinus albus HOM05D006252 ORTHO05D007909 4.4e-64 248.4 197 70.1
Psat7g223760 Pisum sativum HOM05D006252 ORTHO05D007909 5.8e-64 248.1 197 69.5
MBI02_g05768_MAGBIO Magnolia biondii HOM05D006252 ORTHO05D007909 9.9e-64 247.3 148 83.8
Lalb_Chr03g0027721 Lupinus albus HOM05D006252 ORTHO05D007909 1.3e-63 246.9 197 69.0
Rhsim01G0210400 Rhododendron simsii HOM05D006252 ORTHO05D007909 4.9e-63 245.0 198 66.7
TPR.G36832 Trifolium pratense HOM05D006252 ORTHO05D007909 3.2e-62 242.3 197 67.0
Hund01525 Selenicereus undatus HOM05D006252 ORTHO05D007909 2.1e-61 239.6 191 69.1
Zm00001eb258190 Zea mays HOM05D006252 ORTHO05D007909 3.3e-59 232.3 170 69.4
Dinv16227 Davidia involucrata HOM05D006252 ORTHO05D007909 1.4e-57 226.9 148 81.8
Mapoly0005s0034 Marchantia polymorpha HOM05D006252 ORTHO05D007909 1.9e-46 189.9 166 56.6
AagrBONN_evm.TU.Sc2ySwM_362.2261 Anthoceros agrestis HOM05D006252 ORTHO05D007909 4.2e-46 188.7 161 57.1
Sc21g0000330 Simmondsia chinensis HOM05D006252 ORTHO05D007909 1.6e-42 176.8 142 70.4
Haze_24363 Corylus avellana HOM05D006252 ORTHO05D007909 3.1e-41 172.6 105 83.8
Pp3c2_34110 Physcomitrium patens HOM05D006252 ORTHO05D007909 1.7e-39 166.8 168 52.4
CBR_g36656 Chara braunii HOM05D006252 ORTHO05D007909 6.5e-39 164.9 168 52.4
Pp3c1_5300 Physcomitrium patens HOM05D006252 ORTHO05D007909 6.5e-39 164.9 158 54.4
Pp3c1_5320 Physcomitrium patens HOM05D006252 ORTHO05D007909 6.5e-39 164.9 158 54.4
Thhalv10023194m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 8.4e-39 164.5 102 87.3
Oeu007732.1 Olea europaea HOM05D006252 ORTHO05D007909 1.4e-38 163.7 94 89.4
Pp3c2_34120 Physcomitrium patens HOM05D006252 ORTHO05D007909 1.4e-38 163.7 195 48.7
arahy.Tifrunner.gnm1.ann1.151HRH Arachis hypogaea HOM05D006252 ORTHO05D007909 1.9e-38 163.3 103 81.6
SMO118G0111 Selaginella moellendorffii HOM05D006252 ORTHO05D007909 3.5e-37 159.1 171 50.3
arahy.Tifrunner.gnm1.ann1.RBN82M Arachis hypogaea HOM05D006252 ORTHO05D007909 1.3e-34 150.6 103 76.7
Actinidia24149 Actinidia chinensis HOM05D006252 ORTHO05D007909 1.9e-30 136.7 114 66.7
arahy.Tifrunner.gnm1.ann1.EI3IVH Arachis hypogaea HOM05D006252 ORTHO05D007909 2.1e-29 133.3 90 77.8
SEGI_37172 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 2.8e-26 122.9 88 69.3
arahy.Tifrunner.gnm1.ann1.8D185T Arachis hypogaea HOM05D006252 ORTHO05D005826 1.5e-24 117.1 71 83.1
Cre12.g556050 Chlamydomonas reinhardtii HOM05D006252 ORTHO05D007909 1.0e-20 104.4 158 34.8
MCO03G269 Micromonas commoda HOM05D006252 ORTHO05D007909 1.4e-20 104.0 161 36.6
Haze_24362 Corylus avellana HOM05D006252 ORTHO05D007909 6.7e-20 101.7 93 62.4
arahy.Tifrunner.gnm1.ann1.KIT0HG Arachis hypogaea HOM05D006252 ORTHO05D007909 8.2e-18 94.7 88 60.2
Oeu007731.1 Olea europaea HOM05D006252 ORTHO05D007909 1.8e-17 93.6 93 58.1
PRCOL_00001763 Prasinoderma coloniale HOM05D006252 ORTHO05D007909 5.3e-17 92.0 171 32.2
SEGI_26717 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 3.0e-12 76.3 104 43.3
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 8.8e-12 74.7 156 32.1
arahy.Tifrunner.gnm1.ann1.TR51Z4 Arachis hypogaea HOM05D006252 ORTHO05D007909 4.8e-10 68.9 44 68.2
MELO3C029084.2 Cucumis melo HOM05D006252 ORTHO05D007909 1.4e-09 67.4 43 69.8
Zm00001eb258210 Zea mays HOM05D000274 ORTHO05D006772 2.0e-08 63.5 67 49.3
arahy.Tifrunner.gnm1.ann1.LGS4T1 Arachis hypogaea HOM05D006252 ORTHO05D007909 2.9e-07 59.7 48 64.6


User provided reference genes

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