Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p26540 Brassica napus HOM05D003421 ORTHO05D003268 1.1e-80 303.1 145 100.0
BraA06t25464Z Brassica rapa HOM05D008596 ORTHO05D003268 8.9e-70 266.9 144 88.9
A01p26930 Brassica napus HOM05D008596 ORTHO05D003268 2.0e-66 255.8 145 86.9
A03p68840 Brassica napus HOM05D008596 ORTHO05D003268 1.0e-65 253.4 144 86.1
A08p08190 Brassica napus HOM05D008596 ORTHO05D003268 1.0e-65 253.4 143 85.3
BraSC39t46179Z Brassica rapa HOM05D008596 ORTHO05D003268 1.0e-65 253.4 144 86.1
A05p19660 Brassica napus HOM05D008596 ORTHO05D003268 4.6e-58 228.0 139 82.0
A03p66670 Brassica napus HOM05D008596 ORTHO05D003268 1.3e-57 226.5 132 84.8
A06p24280 Brassica napus HOM05D008596 ORTHO05D003268 3.2e-51 205.3 117 85.5
A06p25180 Brassica napus HOM05D008596 ORTHO05D003268 3.2e-51 205.3 117 85.5
A05p23070 Brassica napus HOM05D008596 ORTHO05D003268 9.2e-51 203.8 117 84.6
A06p23500 Brassica napus HOM05D008596 ORTHO05D003268 3.0e-41 172.2 113 77.0
BcaC04g20964 Brassica carinata HOM05D003421 ORTHO05D003268 5.4e-35 151.4 140 50.0
BolC3t19281H Brassica oleracea HOM05D003421 ORTHO05D003268 9.3e-35 150.6 140 47.1
BolC2t09439H Brassica oleracea HOM05D003421 ORTHO05D003268 1.3e-33 146.7 142 46.5
C05p36560 Brassica napus HOM05D003421 ORTHO05D003268 1.1e-32 143.7 100 76.0
BolC8t48271H Brassica oleracea HOM05D003421 ORTHO05D003268 1.4e-30 136.7 125 48.8
BolC1t03978H Brassica oleracea HOM05D003421 ORTHO05D003268 3.1e-30 135.6 133 45.9
BolC5t33453H Brassica oleracea HOM05D003421 ORTHO05D003268 2.4e-27 125.9 140 40.7
BraA01t02722Z Brassica rapa HOM05D003421 ORTHO05D003268 2.4e-27 125.9 139 41.7
BolC2t10401H Brassica oleracea HOM05D007986 ORTHO05D003268 1.6e-26 123.2 145 43.4
BolC9t56870H Brassica oleracea HOM05D003421 ORTHO05D003268 1.3e-25 120.2 140 42.1
BolC3t19358H Brassica oleracea HOM05D003421 ORTHO05D003268 6.7e-25 117.9 114 44.7
BolC8t47514H Brassica oleracea HOM05D003421 ORTHO05D003268 2.5e-24 115.9 137 37.2
BolC4t23765H Brassica oleracea HOM05D003421 ORTHO05D003268 5.6e-24 114.8 131 39.7
BolC2t10336H Brassica oleracea HOM05D003421 ORTHO05D003268 7.4e-24 114.4 125 43.2
BolC5t31599H Brassica oleracea HOM05D007986 ORTHO05D013025 1.1e-22 110.5 144 41.7
BolC2t09874H Brassica oleracea HOM05D003421 ORTHO05D003268 1.2e-21 107.1 140 36.4
BolC3t19084H Brassica oleracea HOM05D003421 ORTHO05D003268 7.6e-21 104.4 117 44.4
BcaC07g37480 Brassica carinata HOM05D007986 ORTHO05D003268 8.4e-20 100.9 84 54.8
BolC9t56013H Brassica oleracea HOM05D003421 ORTHO05D003268 1.1e-19 100.5 94 47.9
BolC1t03345H Brassica oleracea HOM05D003421 ORTHO05D003268 4.2e-19 98.6 102 46.1
BolC3t19165H Brassica oleracea HOM05D003421 ORTHO05D003268 7.1e-19 97.8 113 44.2
BolC8t47709H Brassica oleracea HOM05D003421 ORTHO05D003268 1.6e-18 96.7 91 45.1
BolC4t25137H Brassica oleracea HOM05D003421 ORTHO05D003268 6.0e-18 94.7 140 35.0
BolC5t31483H Brassica oleracea HOM05D028664 ORTHO05D032055 3.9e-17 92.0 86 51.2
BolC9t56748H Brassica oleracea HOM05D003421 ORTHO05D003268 5.1e-17 91.7 117 36.8
A05p24140 Brassica napus HOM05D008596 ORTHO05D003268 1.5e-16 90.1 51 84.3
A05p29660 Brassica napus HOM05D008596 ORTHO05D003268 1.5e-16 90.1 54 81.5
BolC7t42918H Brassica oleracea HOM05D003421 ORTHO05D003268 1.9e-16 89.7 119 39.5
BraA05t21116Z Brassica rapa HOM05D008596 ORTHO05D003268 7.4e-16 87.8 51 84.3
BolC4t24275H Brassica oleracea HOM05D007986 ORTHO05D003268 1.3e-15 87.0 104 39.4
BolC7t42082H Brassica oleracea HOM05D003421 ORTHO05D003268 2.8e-15 85.9 109 38.5
BNapus_Darmor_BZH_scaffold_65p00030 Brassica napus HOM05D027739 ORTHO05D024662 4.8e-15 85.1 64 71.9
BolC1t03331H Brassica oleracea HOM05D007986 ORTHO05D013025 8.2e-15 84.3 102 42.2
BolC7t42956H Brassica oleracea HOM05D003421 ORTHO05D042986 1.8e-14 83.2 100 42.0
BolC8t48644H Brassica oleracea HOM05D002078 ORTHO05D005680 2.4e-14 82.8 144 29.9
BcaC08g43964 Brassica carinata HOM05D003421 ORTHO05D003268 3.1e-14 82.4 77 46.8
AT4G32200 Arabidopsis thaliana HOM05D003724 ORTHO05D004367 5.3e-14 81.6 128 35.2
BraA05t18958Z Brassica rapa HOM05D008596 ORTHO05D003268 6.9e-14 81.3 51 74.5
Sp7g05200 Schrenkiella parvula HOM05D002078 ORTHO05D005680 6.9e-14 81.3 140 30.0
BolC4t24296H Brassica oleracea HOM05D003421 ORTHO05D003268 9.0e-14 80.9 87 42.5
BraA06t25541Z Brassica rapa HOM05D008596 ORTHO05D003268 4.5e-13 78.6 51 76.5
BolC3t19083H Brassica oleracea HOM05D007986 ORTHO05D003268 5.9e-13 78.2 93 41.9
AT2G15420 Arabidopsis thaliana HOM05D010629 ORTHO05D005680 1.0e-12 77.4 126 33.3
BraA09t38671Z Brassica rapa HOM05D003421 ORTHO05D043141 2.9e-12 75.9 85 40.0
Sp4g04860 Schrenkiella parvula HOM05D010772 ORTHO05D005680 3.8e-12 75.5 132 33.3
Sp4g11160 Schrenkiella parvula HOM05D010772 ORTHO05D005680 5.0e-12 75.1 141 29.1
Carub.0003s2886 Capsella rubella HOM05D016834 ORTHO05D016863 1.1e-11 73.9 138 30.4
BcaC05g27617 Brassica carinata HOM05D007986 ORTHO05D003268 1.9e-11 73.2 68 51.5
Carub.0108s0001 Capsella rubella HOM05D016834 ORTHO05D016863 2.5e-11 72.8 128 31.2
Carub.0003s2394 Capsella rubella HOM05D016834 ORTHO05D016863 4.2e-11 72.0 138 30.4
Carub.0006s2612 Capsella rubella HOM05D016834 ORTHO05D016863 7.2e-11 71.2 128 30.5
BolC5t32328H Brassica oleracea HOM05D007986 ORTHO05D003268 9.4e-11 70.9 68 50.0
Carub.0073s0002 Capsella rubella HOM05D016834 ORTHO05D016863 1.2e-10 70.5 128 29.7
Carub.0008s1221 Capsella rubella HOM05D016834 ORTHO05D016863 3.6e-10 68.9 138 29.7
C03p67380 Brassica napus HOM05D008596 ORTHO05D027031 4.6e-10 68.6 123 38.2
HanXRQChr10g0288731 Helianthus annuus HOM05D007966 ORTHO05D003839 4.6e-10 68.6 132 31.1
HanXRQChr11g0350051 Helianthus annuus HOM05D007966 ORTHO05D003839 4.6e-10 68.6 132 31.1
HanXRQChr17g0562331 Helianthus annuus HOM05D007966 ORTHO05D003839 6.1e-10 68.2 132 30.3
HanXRQChr17g0565501 Helianthus annuus HOM05D007966 ORTHO05D003839 7.9e-10 67.8 132 29.5
HanXRQChr05g0130201 Helianthus annuus HOM05D007966 ORTHO05D003839 1.0e-09 67.4 132 29.5
HanXRQChr12g0378841 Helianthus annuus HOM05D007966 ORTHO05D003839 1.4e-09 67.0 130 30.0
HanXRQChr13g0417391 Helianthus annuus HOM05D007966 ORTHO05D003839 1.4e-09 67.0 132 29.5
BcaB02g11248 Brassica carinata HOM05D008969 ORTHO05D012202 2.3e-09 66.2 91 31.9
HanXRQChr04g0116681 Helianthus annuus HOM05D007966 ORTHO05D003839 2.3e-09 66.2 132 30.3
HanXRQChr05g0133271 Helianthus annuus HOM05D007966 ORTHO05D003839 2.3e-09 66.2 132 30.3
HanXRQChr07g0203251 Helianthus annuus HOM05D007966 ORTHO05D003839 2.3e-09 66.2 132 30.3
HanXRQChr09g0259421 Helianthus annuus HOM05D007966 ORTHO05D003839 2.3e-09 66.2 132 30.3
HanXRQChr10g0304151 Helianthus annuus HOM05D007966 ORTHO05D003839 2.3e-09 66.2 132 30.3
HanXRQChr10g0304551 Helianthus annuus HOM05D007966 ORTHO05D003839 2.3e-09 66.2 132 30.3
HanXRQChr10g0318891 Helianthus annuus HOM05D007966 ORTHO05D003839 2.3e-09 66.2 132 30.3
HanXRQChr13g0423071 Helianthus annuus HOM05D007966 ORTHO05D003839 2.3e-09 66.2 132 30.3
HanXRQChr14g0441211 Helianthus annuus HOM05D007966 ORTHO05D003839 2.3e-09 66.2 132 30.3
HanXRQChr16g0509621 Helianthus annuus HOM05D007966 ORTHO05D003839 2.3e-09 66.2 132 30.3
AT1G20400 Arabidopsis thaliana HOM05D011598 ORTHO05D013181 3.0e-09 65.9 130 29.2
BcaC06g35968 Brassica carinata HOM05D003421 ORTHO05D003268 6.7e-09 64.7 120 31.7
HanXRQChr03g0075491 Helianthus annuus HOM05D007966 ORTHO05D003839 6.7e-09 64.7 125 31.2
Sp5g17660 Schrenkiella parvula HOM05D010529 ORTHO05D012528 8.8e-09 64.3 124 26.6
Carub.0002s1244 Capsella rubella HOM05D010629 ORTHO05D005680 1.1e-08 63.9 138 26.8
Carub.0009s0003 Capsella rubella HOM05D016834 ORTHO05D016863 1.1e-08 63.9 113 30.1
Carub.0006s0276 Capsella rubella HOM05D010629 ORTHO05D005680 1.5e-08 63.5 138 26.1
Sp7g11540 Schrenkiella parvula HOM05D010529 ORTHO05D012528 1.5e-08 63.5 142 27.5
Carub.0003s2807 Capsella rubella HOM05D010629 ORTHO05D005680 2.0e-08 63.2 126 26.2
HanXRQChr10g0296091 Helianthus annuus HOM05D007966 ORTHO05D003839 2.5e-08 62.8 132 29.5
Carub.0072s0001 Capsella rubella HOM05D010629 ORTHO05D005680 5.7e-08 61.6 126 26.2
HanXRQChr09g0276161 Helianthus annuus HOM05D007966 ORTHO05D003839 5.7e-08 61.6 132 29.5
AL1G50390 Arabidopsis lyrata HOM05D009492 ORTHO05D011693 9.7e-08 60.8 125 24.8
Carub.0007s3091 Capsella rubella HOM05D016834 ORTHO05D016863 9.7e-08 60.8 138 27.5
Carub.0005s0210 Capsella rubella HOM05D010629 ORTHO05D005680 1.3e-07 60.5 138 25.4
Carub.0353s0001 Capsella rubella HOM05D010629 ORTHO05D005680 1.3e-07 60.5 138 25.4
BcaC04g21351 Brassica carinata HOM05D002078 ORTHO05D005680 2.2e-07 59.7 142 24.6
ECA240G1607 Erigeron canadensis HOM05D008083 ORTHO05D003839 2.2e-07 59.7 125 29.6
BolC2t10278H Brassica oleracea HOM05D003421 ORTHO05D003268 2.8e-07 59.3 62 43.5
ECA240G4704 Erigeron canadensis HOM05D008083 ORTHO05D003839 2.8e-07 59.3 125 30.4
ECA248G2370 Erigeron canadensis HOM05D010435 ORTHO05D002071 2.8e-07 59.3 133 24.8
AL1G53160 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 3.7e-07 58.9 141 23.4
AL3G15920 Arabidopsis lyrata HOM05D011598 ORTHO05D013181 3.7e-07 58.9 141 23.4
BcaC09g49745 Brassica carinata HOM05D006121 ORTHO05D009559 3.7e-07 58.9 142 25.4
ECA234G0997 Erigeron canadensis HOM05D010435 ORTHO05D002071 3.7e-07 58.9 133 24.8
Carub.0007s3050 Capsella rubella HOM05D010629 ORTHO05D005680 4.8e-07 58.5 126 24.6
BcaC08g43200 Brassica carinata HOM05D002078 ORTHO05D005680 6.3e-07 58.2 124 25.8
BraA01t02990Z Brassica rapa HOM05D003421 ORTHO05D003268 6.3e-07 58.2 39 59.0
BcaNung05737 Brassica carinata HOM05D008969 ORTHO05D012202 8.2e-07 57.8 82 32.9
BolC4t23987H Brassica oleracea HOM05D003421 ORTHO05D003268 8.2e-07 57.8 51 47.1
ECA247G0124 Erigeron canadensis HOM05D008083 ORTHO05D003839 1.8e-06 56.6 116 32.8
BcaC03g15130 Brassica carinata HOM05D006121 ORTHO05D009559 2.4e-06 56.2 148 24.3
Zm00001eb375230 Zea mays HOM05D004287 ORTHO05D000116 2.4e-06 56.2 122 29.5
BcaC04g21502 Brassica carinata HOM05D006121 ORTHO05D009559 4.1e-06 55.5 113 25.7
ECA247G2921 Erigeron canadensis HOM05D008083 ORTHO05D003839 4.1e-06 55.5 114 29.8
HanXRQChr14g0431841 Helianthus annuus HOM05D007809 ORTHO05D003839 4.1e-06 55.5 124 29.8
Sp4g04760 Schrenkiella parvula HOM05D010772 ORTHO05D005680 4.1e-06 55.5 84 31.0
Sp6g07550 Schrenkiella parvula HOM05D010772 ORTHO05D005680 4.1e-06 55.5 96 29.2
BcaC04g23210 Brassica carinata HOM05D006121 ORTHO05D009559 5.3e-06 55.1 136 25.0
BcaC05g26571 Brassica carinata HOM05D002078 ORTHO05D005680 5.3e-06 55.1 142 23.2
ECA238G2811 Erigeron canadensis HOM05D008083 ORTHO05D003839 5.3e-06 55.1 124 29.8
AL6G45550 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 9.1e-06 54.3 124 23.4
BcaC06g34587 Brassica carinata HOM05D002078 ORTHO05D005680 9.1e-06 54.3 116 30.2
BolC8t47641H Brassica oleracea HOM05D002078 ORTHO05D005680 9.1e-06 54.3 142 24.6
Carub.0006s2644 Capsella rubella HOM05D009492 ORTHO05D011693 9.1e-06 54.3 131 26.0
SpUn0003_0260 Schrenkiella parvula HOM05D010529 ORTHO05D012528 9.1e-06 54.3 77 32.5


User provided reference genes

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