Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p25660 Brassica napus HOM05D007203 ORTHO05D013810 1.4e-205 719.9 528 100.0
BolC2t09636H Brassica oleracea HOM05D007203 ORTHO05D013810 3.0e-184 649.0 528 89.2
BolC9t57189H Brassica oleracea HOM05D007203 ORTHO05D013810 1.5e-170 603.6 550 87.6
BolC3t15665H Brassica oleracea HOM05D007203 ORTHO05D013810 1.6e-153 547.0 494 88.9
C06p42690 Brassica napus HOM05D007203 ORTHO05D013810 1.7e-147 526.9 522 77.0
BraA02t07693Z Brassica rapa HOM05D007203 ORTHO05D013810 3.4e-135 486.1 736 60.2
BraA09t37753Z Brassica rapa HOM05D007203 ORTHO05D013810 8.4e-134 481.5 727 62.4
BraA01t02907Z Brassica rapa HOM05D007203 ORTHO05D013810 1.3e-126 457.6 476 81.7
C09p43170 Brassica napus HOM05D007203 ORTHO05D013810 1.2e-116 424.5 315 88.9
A01p27690 Brassica napus HOM05D007203 ORTHO05D013810 2.8e-105 386.7 591 63.6
A09p21540 Brassica napus HOM05D007203 ORTHO05D013810 4.0e-104 382.9 592 64.4
BolC8t49801H Brassica oleracea HOM05D007203 ORTHO05D013810 4.3e-98 362.8 490 69.0
C06p45720 Brassica napus HOM05D007203 ORTHO05D013810 5.9e-95 352.4 313 79.2
C09p63040 Brassica napus HOM05D007203 ORTHO05D013810 4.1e-88 329.7 248 91.9
A02p26840 Brassica napus HOM05D007203 ORTHO05D013810 7.0e-72 275.8 531 57.8
C03p33430 Brassica napus HOM05D007203 ORTHO05D013810 4.0e-67 260.0 215 87.9
BcaB08g34543 Brassica carinata HOM05D007203 ORTHO05D011558 1.1e-64 251.9 566 44.9
BolC6t39170H Brassica oleracea HOM05D004128 ORTHO05D008395 6.5e-62 242.7 215 77.7
BcaC05g27919 Brassica carinata HOM05D007203 ORTHO05D039141 9.8e-58 228.8 478 55.9
BcaC05g27574 Brassica carinata HOM05D007203 ORTHO05D039927 5.9e-55 219.5 505 54.3
C06p20830 Brassica napus HOM05D007203 ORTHO05D041891 5.9e-55 219.5 362 68.8
BolC6t37269H Brassica oleracea HOM05D007203 ORTHO05D041891 5.9e-55 219.5 362 68.8
C05p35590 Brassica napus HOM05D007203 ORTHO05D039927 1.5e-53 214.9 484 54.8
BolC2t09431H Brassica oleracea HOM05D007203 ORTHO05D027708 6.3e-49 199.5 139 91.4
BolC3t17977H Brassica oleracea HOM05D007203 ORTHO05D011558 8.3e-49 199.1 201 68.2
C05p39250 Brassica napus HOM05D007203 ORTHO05D039141 1.2e-47 195.3 600 39.8
BcaC08g43405 Brassica carinata HOM05D007203 ORTHO05D094647 3.1e-43 180.6 223 60.5
BcaC01g00586 Brassica carinata HOM05D007203 ORTHO05D031716 3.4e-42 177.2 362 47.5
C01p16070 Brassica napus HOM05D007203 ORTHO05D011558 4.4e-42 176.8 211 61.6
C03p33440 Brassica napus HOM05D007203 ORTHO05D027708 1.7e-41 174.9 116 92.2
BcaC01g03026 Brassica carinata HOM05D007203 ORTHO05D031716 1.4e-40 171.8 411 42.6
BcaC04g23792 Brassica carinata HOM05D007203 ORTHO05D014981 1.4e-40 171.8 107 89.7
C03p57000 Brassica napus HOM05D007203 ORTHO05D031716 7.0e-40 169.5 223 58.3
C06p26970 Brassica napus HOM05D007203 ORTHO05D020127 1.0e-38 165.6 105 95.2
BolC9t57647H Brassica oleracea HOM05D004128 ORTHO05D024421 3.9e-38 163.7 305 44.6
BcaC04g20467 Brassica carinata HOM05D007203 ORTHO05D027708 5.6e-37 159.8 124 85.5
BcaC02g08829 Brassica carinata HOM05D007203 ORTHO05D027555 9.5e-37 159.1 570 42.6
BolC5t32921H Brassica oleracea HOM05D004128 ORTHO05D024421 6.8e-35 152.9 242 48.8
C05p41890 Brassica napus HOM05D004128 ORTHO05D024421 2.9e-33 147.5 300 42.7
BolC6t36233H Brassica oleracea HOM05D004128 ORTHO05D024421 2.9e-33 147.5 249 46.2
BraA07t28682Z Brassica rapa HOM05D007203 ORTHO05D108101 6.4e-33 146.4 154 64.3
BolC5t32660H Brassica oleracea HOM05D007203 ORTHO05D011558 2.1e-31 141.4 133 71.4
BcaC04g20469 Brassica carinata HOM05D007203 ORTHO05D014981 1.3e-30 138.7 77 94.8
C09p28930 Brassica napus HOM05D007203 ORTHO05D008395 1.9e-29 134.8 94 80.9
BcaB03g16432 Brassica carinata HOM05D007203 ORTHO05D011558 3.3e-29 134.0 355 38.6
C01p48560 Brassica napus HOM05D007203 ORTHO05D011558 2.8e-28 131.0 244 44.7
BolC6t37871H Brassica oleracea HOM05D004128 ORTHO05D008395 2.0e-26 124.8 227 48.5
C03p35500 Brassica napus HOM05D007203 ORTHO05D011558 2.6e-26 124.4 78 96.2
C08p21920 Brassica napus HOM05D007203 ORTHO05D011558 4.4e-26 123.6 78 96.2
BcaB01g02001 Brassica carinata HOM05D007203 ORTHO05D008395 1.3e-25 122.1 115 65.2
BcaB01g01921 Brassica carinata HOM05D007203 ORTHO05D011558 1.1e-24 119.0 384 40.6
BcaB04g18412 Brassica carinata HOM05D007203 ORTHO05D011558 1.4e-24 118.6 487 36.8
BcaC04g20468 Brassica carinata HOM05D007203 ORTHO05D094473 7.1e-24 116.3 114 87.7
BcaC09g51181 Brassica carinata HOM05D004128 ORTHO05D024421 7.1e-24 116.3 563 30.6
BcaB06g26429 Brassica carinata HOM05D007203 ORTHO05D011558 1.2e-23 115.5 105 66.7
BcaC02g12420 Brassica carinata HOM05D007203 ORTHO05D027555 1.2e-23 115.5 545 27.7
BolC7t43900H Brassica oleracea HOM05D004128 ORTHO05D008395 1.2e-23 115.5 240 42.1
BcaB01g01643 Brassica carinata HOM05D007203 ORTHO05D011558 2.7e-23 114.4 533 31.5
BcaB05g23656 Brassica carinata HOM05D004128 ORTHO05D008395 3.5e-23 114.0 447 31.8
C09p61810 Brassica napus HOM05D007203 ORTHO05D041948 1.3e-22 112.1 375 56.3
BraA07t28681Z Brassica rapa HOM05D007203 ORTHO05D014981 5.1e-22 110.2 148 50.7
BcaC05g26664 Brassica carinata HOM05D007203 ORTHO05D095942 6.6e-22 109.8 153 54.9
BcaNung01161 Brassica carinata HOM05D007203 ORTHO05D011558 6.6e-22 109.8 382 40.1
BcaC08g44612 Brassica carinata HOM05D007203 ORTHO05D011558 1.5e-21 108.6 405 30.6
C02p38520 Brassica napus HOM05D007203 ORTHO05D014981 2.5e-21 107.8 64 90.6
BraA05t21718Z Brassica rapa HOM05D007203 ORTHO05D011558 2.5e-21 107.8 59 91.5
BcaC08g43729 Brassica carinata HOM05D007203 ORTHO05D092975 4.3e-21 107.1 123 61.8
BcaC03g15868 Brassica carinata HOM05D007203 ORTHO05D008395 1.6e-20 105.1 63 92.1
C01p47030 Brassica napus HOM05D007203 ORTHO05D020137 2.1e-20 104.8 120 60.8
C04p18990 Brassica napus HOM05D002042 ORTHO05D003928 2.1e-20 104.8 91 79.1
BolC1t04671H Brassica oleracea HOM05D007203 ORTHO05D020137 2.1e-20 104.8 120 60.8
BolC5t32659H Brassica oleracea HOM05D007203 ORTHO05D014981 2.1e-20 104.8 68 85.3
BcaB07g32667 Brassica carinata HOM05D003147 ORTHO05D003245 4.7e-20 103.6 117 59.0
BcaC09g48677 Brassica carinata HOM05D007203 ORTHO05D020137 4.7e-20 103.6 124 58.1
A01p36020 Brassica napus HOM05D007203 ORTHO05D020137 4.7e-20 103.6 124 60.5
C03p58910 Brassica napus HOM05D007203 ORTHO05D014981 1.1e-19 102.4 68 83.8
BcaB04g19552 Brassica carinata HOM05D004128 ORTHO05D008395 1.4e-19 102.1 68 88.2
BcaC09g49573 Brassica carinata HOM05D007203 ORTHO05D011558 1.4e-19 102.1 130 53.8
A08p11270 Brassica napus HOM05D007203 ORTHO05D014981 1.4e-19 102.1 68 83.8
BraA08t33122Z Brassica rapa HOM05D007203 ORTHO05D014981 1.4e-19 102.1 68 83.8
A07p08910 Brassica napus HOM05D007203 ORTHO05D014981 1.8e-19 101.7 62 91.9
BcaB03g16102 Brassica carinata HOM05D007203 ORTHO05D011558 3.1e-19 100.9 93 65.6
BolC9t59019H Brassica oleracea HOM05D007203 ORTHO05D041948 3.1e-19 100.9 375 55.2
A08p11290 Brassica napus HOM05D007203 ORTHO05D014981 4.0e-19 100.5 62 88.7
BraA04t16843Z Brassica rapa HOM05D007203 ORTHO05D020137 4.0e-19 100.5 120 59.2
A06p29400 Brassica napus HOM05D004128 ORTHO05D008395 5.2e-19 100.1 218 41.7
C03p35510 Brassica napus HOM05D004128 ORTHO05D008395 5.2e-19 100.1 218 41.7
C01p16000 Brassica napus HOM05D007203 ORTHO05D097579 6.8e-19 99.8 295 41.0
BcaB02g11369 Brassica carinata HOM05D007203 ORTHO05D094245 1.5e-18 98.6 81 69.1
C06p20840 Brassica napus HOM05D007203 ORTHO05D014981 1.5e-18 98.6 60 91.7
BolC6t37271H Brassica oleracea HOM05D007203 ORTHO05D014981 1.5e-18 98.6 60 91.7
BolC1t01561H Brassica oleracea HOM05D007203 ORTHO05D020137 3.4e-18 97.4 115 60.9
BcaB03g14937 Brassica carinata HOM05D007203 ORTHO05D011558 4.4e-18 97.1 58 84.5
BcaB02g11368 Brassica carinata HOM05D007203 ORTHO05D011558 5.8e-18 96.7 104 60.6
BcaB03g16331 Brassica carinata HOM05D007203 ORTHO05D011558 7.6e-18 96.3 87 66.7
BraA08t33125Z Brassica rapa HOM05D007203 ORTHO05D014981 7.6e-18 96.3 60 88.3
C04p52660 Brassica napus HOM05D007203 ORTHO05D020137 9.9e-18 95.9 117 60.7
BcaC04g20090 Brassica carinata HOM05D004128 ORTHO05D008395 8.4e-17 92.8 129 48.8
BolC8t47837H Brassica oleracea HOM05D004128 ORTHO05D008395 2.4e-16 91.3 133 50.4
BraA09t38520Z Brassica rapa HOM05D004128 ORTHO05D008395 2.4e-16 91.3 129 50.4
A08p11280 Brassica napus HOM05D007203 ORTHO05D042169 7.1e-16 89.7 124 79.0
C06p11120 Brassica napus HOM05D007203 ORTHO05D027555 7.1e-16 89.7 600 35.2
BraA08t33124Z Brassica rapa HOM05D007203 ORTHO05D042169 7.1e-16 89.7 124 79.0
BcaB01g01435 Brassica carinata HOM05D007203 ORTHO05D011558 9.3e-16 89.4 368 36.4
BcaB02g11374 Brassica carinata HOM05D004128 ORTHO05D008395 9.3e-16 89.4 186 39.8
C02p41980 Brassica napus HOM05D004128 ORTHO05D008395 9.3e-16 89.4 137 48.2
BraA08t33244Z Brassica rapa HOM05D004128 ORTHO05D008395 1.6e-15 88.6 129 48.8
C09p28920 Brassica napus HOM05D007203 ORTHO05D100065 2.7e-15 87.8 52 92.3
A09p66370 Brassica napus HOM05D000181 ORTHO05D003134 4.6e-15 87.0 137 46.7
BraA03t14882Z Brassica rapa HOM05D004128 ORTHO05D008395 7.8e-15 86.3 129 48.1
C06p37060 Brassica napus HOM05D004128 ORTHO05D008395 1.7e-14 85.1 127 49.6
BcaB04g19551 Brassica carinata HOM05D007203 ORTHO05D008395 3.0e-14 84.3 94 58.5
C07p34800 Brassica napus HOM05D004128 ORTHO05D008395 3.0e-14 84.3 127 48.8
BcaC09g50406 Brassica carinata HOM05D004128 ORTHO05D008395 3.9e-14 84.0 127 48.8
A05p20890 Brassica napus HOM05D004128 ORTHO05D008395 3.9e-14 84.0 137 46.7
C01p25840 Brassica napus HOM05D004128 ORTHO05D008395 3.9e-14 84.0 127 48.8
BraA05t20993Z Brassica rapa HOM05D004128 ORTHO05D008395 3.9e-14 84.0 137 46.7
BcaB04g17725 Brassica carinata HOM05D004128 ORTHO05D008395 1.9e-13 81.6 138 42.0
A01p36010 Brassica napus HOM05D007203 ORTHO05D011558 3.3e-13 80.9 41 95.1
BolC9t57648H Brassica oleracea HOM05D007203 ORTHO05D011558 3.3e-13 80.9 41 95.1
BolC5t32923H Brassica oleracea HOM05D007203 ORTHO05D011558 4.3e-13 80.5 41 95.1
BolC6t36235H Brassica oleracea HOM05D007203 ORTHO05D011558 7.3e-13 79.7 41 92.7
C08p21910 Brassica napus HOM05D004128 ORTHO05D008395 2.1e-12 78.2 99 52.5
BolC6t35308H Brassica oleracea HOM05D004128 ORTHO05D008395 2.1e-12 78.2 99 52.5
C04p26230 Brassica napus HOM05D004128 ORTHO05D008395 2.8e-12 77.8 68 72.1
C07p33860 Brassica napus HOM05D004128 ORTHO05D008395 2.8e-12 77.8 458 27.9
BolC4t24183H Brassica oleracea HOM05D004128 ORTHO05D008395 2.8e-12 77.8 68 72.1
BraA09t38472Z Brassica rapa HOM05D004128 ORTHO05D008395 3.6e-12 77.4 112 48.2
C03p70570 Brassica napus HOM05D004128 ORTHO05D008395 6.2e-12 76.6 92 51.1
C09p37460 Brassica napus HOM05D004128 ORTHO05D008395 6.2e-12 76.6 184 39.1
BcaB01g03085 Brassica carinata HOM05D007203 ORTHO05D011558 1.8e-11 75.1 51 74.5
C03p60470 Brassica napus HOM05D004128 ORTHO05D008395 1.8e-11 75.1 99 50.5
C04p49980 Brassica napus HOM05D007203 ORTHO05D027555 1.8e-11 75.1 235 35.7
BolC2t09432H Brassica oleracea HOM05D004128 ORTHO05D008395 3.1e-11 74.3 96 52.1
BraA10t42724Z Brassica rapa HOM05D004128 ORTHO05D008395 3.1e-11 74.3 129 41.9
BcaB04g19338 Brassica carinata HOM05D007203 ORTHO05D011558 5.3e-11 73.6 45 86.7
C01p15990 Brassica napus HOM05D007203 ORTHO05D011558 5.3e-11 73.6 40 87.5
BcaB02g11375 Brassica carinata HOM05D007203 ORTHO05D011558 1.2e-10 72.4 139 43.9
C03p82170 Brassica napus HOM05D004128 ORTHO05D024629 1.2e-10 72.4 149 38.9
BolC3t20535H Brassica oleracea HOM05D004128 ORTHO05D024629 1.2e-10 72.4 149 38.9
BraA09t37797Z Brassica rapa HOM05D004128 ORTHO05D024629 3.4e-10 70.9 81 51.9
BcaB03g12495 Brassica carinata HOM05D007203 ORTHO05D020127 9.9e-10 69.3 42 78.6
C01p27640 Brassica napus HOM05D004128 ORTHO05D008395 6.4e-09 66.6 101 44.6
BolC9t55613H Brassica oleracea HOM05D004128 ORTHO05D008395 8.4e-09 66.2 107 45.8
BcaB04g17661 Brassica carinata HOM05D004128 ORTHO05D008395 1.4e-08 65.5 461 38.6
C06p32870 Brassica napus HOM05D007203 ORTHO05D102649 1.4e-08 65.5 115 48.7
C06p45710 Brassica napus HOM05D007203 ORTHO05D027708 1.9e-08 65.1 53 75.5
A02p26600 Brassica napus HOM05D007203 ORTHO05D020127 9.3e-08 62.8 70 61.4
C06p01800 Brassica napus HOM05D004128 ORTHO05D008395 2.1e-07 61.6 87 44.8
BolC6t38472H Brassica oleracea HOM05D004128 ORTHO05D008395 2.1e-07 61.6 61 60.7
C04p23890 Brassica napus HOM05D004128 ORTHO05D008395 4.6e-07 60.5 57 61.4
A01p28280 Brassica napus HOM05D004128 ORTHO05D017536 6.0e-07 60.1 63 66.7
C08p06790 Brassica napus HOM05D008062 ORTHO05D042315 6.0e-07 60.1 56 60.7
BraA07t29497Z Brassica rapa HOM05D004128 ORTHO05D017536 6.0e-07 60.1 63 66.7
BraA08t33243Z Brassica rapa HOM05D004128 ORTHO05D017536 6.0e-07 60.1 63 66.7
BcaB05g23062 Brassica carinata HOM05D004128 ORTHO05D092751 7.9e-07 59.7 135 36.3
BolC8t50772H Brassica oleracea HOM05D004128 ORTHO05D008395 7.9e-07 59.7 63 57.1
BNapus_Darmor_BZH_scaffold_167p00050 Brassica napus HOM05D004128 ORTHO05D008395 1.0e-06 59.3 191 35.6
C01p48540 Brassica napus HOM05D004128 ORTHO05D020127 1.0e-06 59.3 63 66.7
BolC2t07285H Brassica oleracea HOM05D004128 ORTHO05D008395 1.0e-06 59.3 106 43.4
BolC6t36978H Brassica oleracea HOM05D004128 ORTHO05D008395 1.0e-06 59.3 230 31.7
C03p16290 Brassica napus HOM05D000588 ORTHO05D000637 1.3e-06 58.9 84 63.1
C03p49800 Brassica napus HOM05D004128 ORTHO05D018561 1.3e-06 58.9 100 44.0
A03p58150 Brassica napus HOM05D004128 ORTHO05D008395 1.7e-06 58.5 63 65.1
A08p09180 Brassica napus HOM05D004128 ORTHO05D008395 2.3e-06 58.2 176 36.4
C08p21900 Brassica napus HOM05D007203 ORTHO05D020127 3.0e-06 57.8 63 65.1
BolC3t17978H Brassica oleracea HOM05D007203 ORTHO05D020127 3.0e-06 57.8 63 65.1
BolC8t47741H Brassica oleracea HOM05D039310 ORTHO05D032948 3.0e-06 57.8 59 54.2
BolC8t48683H Brassica oleracea HOM05D008062 ORTHO05D008395 5.1e-06 57.0 192 35.4


User provided reference genes

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