Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p24630 Brassica napus HOM05D004660 ORTHO05D005474 2.5e-80 302.0 143 100.0
BraA01t02375Z Brassica rapa HOM05D004660 ORTHO05D005474 2.5e-80 302.0 143 100.0
BcaC09g49961 Brassica carinata HOM05D004660 ORTHO05D005474 2.5e-77 292.0 143 97.9
BolC1t03007H Brassica oleracea HOM05D004660 ORTHO05D005474 2.5e-77 292.0 143 97.9
BcaB02g09594 Brassica carinata HOM05D004660 ORTHO05D005474 7.4e-69 263.8 147 87.1
BraA06t25770Z Brassica rapa HOM05D004660 ORTHO05D005474 2.2e-68 262.3 147 85.7
AL5G29390 Arabidopsis lyrata HOM05D004660 ORTHO05D005474 2.8e-68 261.9 148 87.2
Thhalv10010801m.g Eutrema salsugineum HOM05D004660 ORTHO05D005474 1.2e-66 256.5 148 83.8
Sp5g12560 Schrenkiella parvula HOM05D004660 ORTHO05D005474 2.0e-66 255.8 147 85.0
A06p28270 Brassica napus HOM05D004660 ORTHO05D005474 2.6e-66 255.4 147 84.4
THA.LOC104803315 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 1.6e-63 246.1 148 82.4
C03p65490 Brassica napus HOM05D004660 ORTHO05D005474 2.1e-63 245.7 132 86.4
THA.LOC104814957 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 3.6e-63 245.0 148 82.4
Carub.0006s2247 Capsella rubella HOM05D004660 ORTHO05D005474 1.8e-62 242.7 149 81.9
AT3G49550 Arabidopsis thaliana HOM05D004660 ORTHO05D005474 2.3e-62 242.3 151 81.5
Cpa.g.sc3.184 Carica papaya HOM05D004660 ORTHO05D005474 2.3e-62 242.3 147 79.6
Thhalv10005081m.g Eutrema salsugineum HOM05D004660 ORTHO05D005474 3.0e-62 241.9 149 81.9
Sp2g22770 Schrenkiella parvula HOM05D004660 ORTHO05D005474 5.2e-62 241.1 149 81.2
AL6G36220 Arabidopsis lyrata HOM05D004660 ORTHO05D005474 5.7e-61 237.7 148 81.8
arahy.Tifrunner.gnm1.ann1.6FR5WN Arachis hypogaea HOM05D004660 ORTHO05D005474 2.2e-60 235.7 147 75.5
Carub.0005s1588 Capsella rubella HOM05D004660 ORTHO05D005474 3.7e-60 235.0 137 83.2
AT5G24610 Arabidopsis thaliana HOM05D004660 ORTHO05D005474 1.8e-59 232.6 149 81.2
Glyma.04G225900 Glycine max HOM05D004660 ORTHO05D005474 1.8e-59 232.6 148 76.4
Glyma.06G138900 Glycine max HOM05D004660 ORTHO05D005474 2.4e-59 232.3 148 76.4
Aa31LG11G3870 Aethionema arabicum HOM05D004660 ORTHO05D005474 5.3e-59 231.1 147 78.2
Duzib205G1429 Durio zibethinus HOM05D004660 ORTHO05D005474 7.0e-59 230.7 148 75.7
Hma1.2p1_0115F.1_g055760 Hydrangea macrophylla HOM05D004660 ORTHO05D005474 7.0e-59 230.7 147 74.1
CAN.G303.55 Capsicum annuum HOM05D004660 ORTHO05D005474 9.1e-59 230.3 147 74.8
Phvul.008G188100 Phaseolus vulgaris HOM05D004660 ORTHO05D005474 2.0e-58 229.2 147 74.8
Atru.chr12.2504 Acer truncatum HOM05D004660 ORTHO05D005474 2.6e-58 228.8 147 74.1
Atru.chr12.2527 Acer truncatum HOM05D004660 ORTHO05D005474 2.6e-58 228.8 147 74.1
CiPaw.06G038500 Carya illinoinensis HOM05D004660 ORTHO05D005474 3.5e-58 228.4 148 73.6
Nitab4.5_0007121g0060 Nicotiana tabacum HOM05D004660 ORTHO05D005474 3.5e-58 228.4 147 73.5
Nitab4.5_0000021g0160 Nicotiana tabacum HOM05D004660 ORTHO05D005474 4.5e-58 228.0 147 73.5
GSVIVG01038677001 Vitis vinifera HOM05D004660 ORTHO05D005474 4.5e-58 228.0 147 72.1
VMungo0647G0407 Vigna mungo HOM05D004660 ORTHO05D005474 5.9e-58 227.6 147 73.5
BcaB07g29917 Brassica carinata HOM05D004660 ORTHO05D005474 7.7e-58 227.3 148 81.8
A06p35410 Brassica napus HOM05D004660 ORTHO05D005474 7.7e-58 227.3 151 77.5
BraA06t26464Z Brassica rapa HOM05D004660 ORTHO05D005474 7.7e-58 227.3 151 77.5
COL.COLO4_14397 Corchorus olitorius HOM05D004660 ORTHO05D005474 7.7e-58 227.3 135 79.3
CARHR188840 Cardamine hirsuta HOM05D004660 ORTHO05D005474 1.3e-57 226.5 150 77.3
Thecc.03G211800 Theobroma cacao HOM05D004660 ORTHO05D005474 1.3e-57 226.5 148 74.3
CSS0012455 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 3.8e-57 224.9 147 72.8
Gohir.A08G106300 Gossypium hirsutum HOM05D004660 ORTHO05D005474 3.8e-57 224.9 148 73.6
Solyc03g079970.1 Solanum lycopersicum HOM05D004660 ORTHO05D005474 3.8e-57 224.9 147 71.4
Sopen03g021700 Solanum pennellii HOM05D004660 ORTHO05D005474 3.8e-57 224.9 147 71.4
PGSC0003DMG400000574 Solanum tuberosum HOM05D004660 ORTHO05D005474 3.8e-57 224.9 147 71.4
TWI39G0024 Tripterygium wilfordii HOM05D004660 ORTHO05D005474 3.8e-57 224.9 147 72.1
Glyma.02G221000 Glycine max HOM05D004660 ORTHO05D005474 5.0e-57 224.6 147 72.8
vmacro10172 Vaccinium macrocarpon HOM05D004660 ORTHO05D005474 5.0e-57 224.6 147 71.4
Haze_00331 Corylus avellana HOM05D004660 ORTHO05D005474 1.1e-56 223.4 147 73.5
Lj1g0017846 Lotus japonicus HOM05D004660 ORTHO05D005474 1.1e-56 223.4 147 70.7
Migut.F00125 Erythranthe guttata HOM05D004660 ORTHO05D005474 1.5e-56 223.0 147 72.8
Potri.015G000900 Populus trichocarpa HOM05D004660 ORTHO05D005474 1.5e-56 223.0 149 74.5
Ciclev10022731m.g Citrus clementina HOM05D004660 ORTHO05D005474 1.9e-56 222.6 147 71.4
Lalb_Chr10g0102981 Lupinus albus HOM05D004660 ORTHO05D005474 1.9e-56 222.6 147 74.1
TWI23G0412 Tripterygium wilfordii HOM05D004660 ORTHO05D005474 2.5e-56 222.2 147 71.4
Glyma.14G188500 Glycine max HOM05D004660 ORTHO05D005474 3.2e-56 221.9 147 71.4
QL09p006015 Quercus lobata HOM05D004660 ORTHO05D005474 3.2e-56 221.9 147 71.4
Gohir.D08G117700 Gossypium hirsutum HOM05D004660 ORTHO05D005474 4.2e-56 221.5 148 72.3
Gorai.004G126200 Gossypium raimondii HOM05D004660 ORTHO05D005474 4.2e-56 221.5 148 72.3
Rhsim09G0211000 Rhododendron simsii HOM05D004660 ORTHO05D005474 4.2e-56 221.5 147 70.1
VMungo1309G2317 Vigna mungo HOM05D004660 ORTHO05D005474 4.2e-56 221.5 149 73.2
Lj1P1031T30 Lonicera japonica HOM05D004660 ORTHO05D005474 5.5e-56 221.1 151 71.5
Manes.05G195800 Manihot esculenta HOM05D004660 ORTHO05D005474 5.5e-56 221.1 147 71.4
LjContig00155g0012911 Lotus japonicus HOM05D004660 ORTHO05D005474 7.2e-56 220.7 147 71.4
Aqoxy5G04391 Aquilegia oxysepala HOM05D004660 ORTHO05D005474 9.4e-56 220.3 148 69.6
BcaC03g17953 Brassica carinata HOM05D004660 ORTHO05D005474 9.4e-56 220.3 151 77.5
C02p60130 Brassica napus HOM05D004660 ORTHO05D005474 9.4e-56 220.3 151 77.5
BolC2t12069H Brassica oleracea HOM05D004660 ORTHO05D005474 9.4e-56 220.3 151 77.5
Sc19g0000390 Simmondsia chinensis HOM05D004660 ORTHO05D005474 1.6e-55 219.5 144 70.1
BcaNung01246 Brassica carinata HOM05D004660 ORTHO05D005474 2.1e-55 219.2 151 76.2
Phvul.009G040000 Phaseolus vulgaris HOM05D004660 ORTHO05D005474 3.6e-55 218.4 149 73.2
Ca_16837_v3 Cicer arietinum L. HOM05D004660 ORTHO05D005474 4.7e-55 218.0 146 69.2
Lj3P891T43 Lonicera japonica HOM05D004660 ORTHO05D005474 4.7e-55 218.0 147 70.7
EL10Ac3g05134 Beta vulgaris HOM05D004660 ORTHO05D005474 6.1e-55 217.6 136 71.3
A02p40180 Brassica napus HOM05D004660 ORTHO05D005474 6.1e-55 217.6 151 76.8
CSS0035101 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 6.1e-55 217.6 147 70.7
BraA02t08983Z Brassica rapa HOM05D004660 ORTHO05D005474 8.0e-55 217.2 151 76.8
DCAR_014568 Daucus carota HOM05D004660 ORTHO05D005474 8.0e-55 217.2 147 72.1
CiPaw.05G208600 Carya illinoinensis HOM05D004660 ORTHO05D005474 1.4e-54 216.5 147 69.4
LjContig00312_ERROPOS870357g0003416 Lotus japonicus HOM05D004660 ORTHO05D005474 3.0e-54 215.3 148 70.3
CARHR158560 Cardamine hirsuta HOM05D004660 ORTHO05D005474 4.0e-54 214.9 152 72.4
TPR.G35910 Trifolium pratense HOM05D004660 ORTHO05D005474 4.0e-54 214.9 147 70.1
AUR62028114 Chenopodium quinoa HOM05D004660 ORTHO05D005474 5.2e-54 214.5 136 70.6
Peaxi162Scf01026g00258 Petunia axillaris HOM05D004660 ORTHO05D005474 5.2e-54 214.5 138 73.2
BcaNung02008 Brassica carinata HOM05D004660 ORTHO05D005474 6.7e-54 214.2 149 77.9
C07p43100 Brassica napus HOM05D004660 ORTHO05D005474 6.7e-54 214.2 149 77.9
BolC7t44836H Brassica oleracea HOM05D004660 ORTHO05D005474 6.7e-54 214.2 149 77.9
Psat5g071200 Pisum sativum HOM05D004660 ORTHO05D005474 8.8e-54 213.8 149 71.1
Potri.012G004900 Populus trichocarpa HOM05D004660 ORTHO05D005474 8.8e-54 213.8 149 70.5
MSTRG.26954 Avicennia marina HOM05D004660 ORTHO05D005474 1.2e-53 213.4 147 68.0
Oeu055424.1 Olea europaea HOM05D004660 ORTHO05D005474 1.2e-53 213.4 147 69.4
Prupe.2G321900 Prunus persica HOM05D004660 ORTHO05D005474 1.2e-53 213.4 147 70.1
Oeu061046.1 Olea europaea HOM05D004660 ORTHO05D005474 1.5e-53 213.0 146 67.8
AUR62005951 Chenopodium quinoa HOM05D004660 ORTHO05D005474 2.0e-53 212.6 136 69.9
SGA_v2.0_scaffold44G16872 Striga asiatica HOM05D004660 ORTHO05D005474 2.6e-53 212.2 148 70.3
Ah.13g071030 Amaranthus hybridus HOM05D004660 ORTHO05D005474 3.3e-53 211.8 137 70.1
CANSAT21G0927 Cannabis sativa HOM05D004660 ORTHO05D005474 4.4e-53 211.5 151 71.5
SalBow4G0874 Salvia bowleyana HOM05D004660 ORTHO05D005474 4.4e-53 211.5 147 70.1
THA.LOC104799676 Tarenaya hassleriana HOM05D004660 ORTHO05D005474 4.4e-53 211.5 148 72.3
Psat2g060520 Pisum sativum HOM05D004660 ORTHO05D005474 5.7e-53 211.1 148 70.3
Psat7g096840 Pisum sativum HOM05D004660 ORTHO05D005474 5.7e-53 211.1 148 70.3
FAN10G1296 Fragaria x ananassa HOM05D004660 ORTHO05D005474 7.5e-53 210.7 147 68.7
FAN10G4080 Fragaria x ananassa HOM05D004660 ORTHO05D005474 7.5e-53 210.7 147 68.7
FAN01G2536 Fragaria x ananassa HOM05D004660 ORTHO05D005474 9.7e-53 210.3 147 69.4
TPR.G27918 Trifolium pratense HOM05D004660 ORTHO05D005474 1.3e-52 209.9 149 70.5
Ca_05550_v3 Cicer arietinum L. HOM05D004660 ORTHO05D005474 1.7e-52 209.5 147 69.4
FvH4_7g33300 Fragaria vesca HOM05D004660 ORTHO05D005474 1.7e-52 209.5 147 68.0
Sed0024142 Sechium edule HOM05D004660 ORTHO05D005474 2.2e-52 209.1 147 68.0
SGA_v2.0_scaffold18G08494 Striga asiatica HOM05D004660 ORTHO05D005474 2.2e-52 209.1 146 68.5
Hma1.2p1_0415F.1_g148340 Hydrangea macrophylla HOM05D004660 ORTHO05D005474 2.8e-52 208.8 149 68.5
Sed0002848 Sechium edule HOM05D004660 ORTHO05D005474 4.8e-52 208.0 147 67.3
ClCG07G009740 Citrullus lanatus HOM05D004660 ORTHO05D005474 6.3e-52 207.6 147 67.3
CsaV3_4G009710 Cucumis sativus L. HOM05D004660 ORTHO05D005474 8.2e-52 207.2 147 67.3
MBI12_g37476_MAGBIO Magnolia biondii HOM05D004660 ORTHO05D005474 8.2e-52 207.2 145 67.6
MELO3C024844.2 Cucumis melo HOM05D004660 ORTHO05D005474 1.1e-51 206.8 147 67.3
Migut.F00969 Erythranthe guttata HOM05D004660 ORTHO05D005474 1.1e-51 206.8 148 68.2
MD01G1231200 Malus domestica HOM05D004660 ORTHO05D005474 1.4e-51 206.5 147 66.7
Medtr5g068660 Medicago truncatula HOM05D004660 ORTHO05D005474 1.4e-51 206.5 149 69.1
DCAR_020388 Daucus carota HOM05D004660 ORTHO05D005474 1.8e-51 206.1 147 67.3
RcHm_v2.0_Chr1g0383281 Rosa chinensis HOM05D004660 ORTHO05D005474 2.4e-51 205.7 148 68.2
TAR629G0239 Trochodendron aralioides HOM05D004660 ORTHO05D005474 3.1e-51 205.3 147 69.4
arahy.Tifrunner.gnm1.ann1.N0NSHG Arachis hypogaea HOM05D004660 ORTHO05D005474 1.2e-50 203.4 129 76.0
Gohir.A12G244500 Gossypium hirsutum HOM05D004660 ORTHO05D005474 1.2e-50 203.4 133 74.4
Gorai.008G263000 Gossypium raimondii HOM05D004660 ORTHO05D005474 1.2e-50 203.4 133 74.4
HanXRQChr01g0002691 Helianthus annuus HOM05D004660 ORTHO05D005474 1.6e-50 203.0 151 66.2
Gohir.D12G245400 Gossypium hirsutum HOM05D004660 ORTHO05D005474 2.7e-50 202.2 133 73.7
Ah.13g069080 Amaranthus hybridus HOM05D004660 ORTHO05D005474 5.9e-50 201.1 136 67.6
ATR0579G143 Amborella trichopoda HOM05D004660 ORTHO05D005474 1.7e-49 199.5 148 63.5
FAN03G0846 Fragaria x ananassa HOM05D004660 ORTHO05D005474 8.5e-49 197.2 141 68.1
unitig_92.g28236 Utricularia gibba HOM05D004660 ORTHO05D005474 3.2e-48 195.3 147 61.9
CSS0045456 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 4.2e-48 194.9 117 73.5
Lsat_1_v5_gn_6_117240 Lactuca sativa HOM05D004660 ORTHO05D005474 2.7e-47 192.2 150 64.0
Manes.01G050300 Manihot esculenta HOM05D004660 ORTHO05D005474 2.7e-47 192.2 126 73.0
BcaC01g02416 Brassica carinata HOM05D004660 ORTHO05D005474 1.0e-46 190.3 101 88.1
Zm00001eb220600 Zea mays HOM05D004660 ORTHO05D005474 1.4e-46 189.9 147 63.9
arahy.Tifrunner.gnm1.ann1.0Y4BRG Arachis hypogaea HOM05D004660 ORTHO05D005474 5.2e-46 188.0 133 70.7
unitig_37.g11998 Utricularia gibba HOM05D004660 ORTHO05D005474 5.2e-46 188.0 147 61.2
Zm00001eb043850 Zea mays HOM05D004660 ORTHO05D005474 3.5e-42 175.3 147 61.2
Os10g0509100 Oryza sativa ssp. japonica HOM05D004660 ORTHO05D005474 2.3e-41 172.6 147 61.2
Nn3g18745 Nelumbo nucifera HOM05D004660 ORTHO05D005474 2.5e-40 169.1 135 62.2
RcHm_v2.0_Chr4g0433201 Rosa chinensis HOM05D004660 ORTHO05D005474 1.2e-39 166.8 124 66.9
MD07G1303200 Malus domestica HOM05D004660 ORTHO05D005474 3.4e-37 158.7 101 71.3
Medtr3g093320 Medicago truncatula HOM05D004660 ORTHO05D005474 4.1e-35 151.8 147 57.8
CSS0032658 Camellia sinensis var. sinensis HOM05D004660 ORTHO05D005474 1.0e-33 147.1 96 71.9
SEGI_20417 Sequoiadendron giganteum HOM05D004660 ORTHO05D005474 5.0e-33 144.8 142 51.4
Cc02_g00620 Coffea canephora HOM05D004660 ORTHO05D005474 3.3e-32 142.1 147 53.1
SalBow2G1279 Salvia bowleyana HOM05D004660 ORTHO05D005474 2.1e-31 139.4 97 70.1
Mapoly0204s0014 Marchantia polymorpha HOM05D004660 ORTHO05D005474 5.2e-30 134.8 127 55.1
SMO351G0342 Selaginella moellendorffii HOM05D004660 ORTHO05D005474 2.8e-23 112.5 134 44.8
Aa31LG4G18040 Aethionema arabicum HOM05D004660 ORTHO05D005474 1.8e-22 109.8 128 54.7
AagrBONN_evm.TU.Sc2ySwM_117.1216 Anthoceros agrestis HOM05D004660 ORTHO05D005474 1.2e-18 97.1 94 48.9
Actinidia08719 Actinidia chinensis HOM05D004660 ORTHO05D005474 2.1e-18 96.3 67 67.2
DCAR_001793 Daucus carota HOM05D000001 ORTHO05D000003 5.0e-17 91.7 75 61.3
Cre07.g345800 Chlamydomonas reinhardtii HOM05D004660 ORTHO05D005474 6.0e-10 68.2 85 38.8


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