Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p23480 Brassica napus HOM05D004334 ORTHO05D004763 1.2e-75 286.6 156 100.0
BraA01t02255Z Brassica rapa HOM05D004334 ORTHO05D004763 1.9e-65 252.7 146 96.6
BcaC09g50093 Brassica carinata HOM05D004334 ORTHO05D004763 4.3e-62 241.5 142 95.1
BcaB01g00520 Brassica carinata HOM05D004334 ORTHO05D004763 1.1e-57 226.9 133 93.2
BolC1t02844H Brassica oleracea HOM05D004334 ORTHO05D004763 1.1e-57 226.9 134 96.3
BcaNung05551 Brassica carinata HOM05D004334 ORTHO05D004763 5.4e-57 224.6 133 94.0
A09p44490 Brassica napus HOM05D004334 ORTHO05D004763 5.4e-57 224.6 133 94.0
C08p26670 Brassica napus HOM05D004334 ORTHO05D004763 5.4e-57 224.6 133 94.0
BolC8t50281H Brassica oleracea HOM05D004334 ORTHO05D004763 5.4e-57 224.6 133 94.0
BraA09t39907Z Brassica rapa HOM05D004334 ORTHO05D004763 5.4e-57 224.6 133 94.0
C01p29130 Brassica napus HOM05D004334 ORTHO05D004763 1.2e-56 223.4 134 94.8
BcaNung00388 Brassica carinata HOM05D004334 ORTHO05D004763 1.6e-56 223.0 135 94.1
Thhalv10010516m.g Eutrema salsugineum HOM05D004334 ORTHO05D004763 1.3e-55 219.9 133 85.7
Sp5g10830 Schrenkiella parvula HOM05D004334 ORTHO05D004763 1.3e-55 219.9 133 92.5
Carub.0005s1777 Capsella rubella HOM05D004334 ORTHO05D004763 1.1e-54 216.9 133 79.7
AL5G31840 Arabidopsis lyrata HOM05D004334 ORTHO05D004763 3.3e-54 215.3 133 87.2
AT3G51390 Arabidopsis thaliana HOM05D004334 ORTHO05D004763 5.6e-54 214.5 133 87.2
CARHR160990 Cardamine hirsuta HOM05D004334 ORTHO05D004763 4.8e-53 211.5 133 89.5
THA.LOC104821351 Tarenaya hassleriana HOM05D004334 ORTHO05D004763 4.0e-44 181.8 139 74.8
Gohir.A11G171000 Gossypium hirsutum HOM05D004334 ORTHO05D004763 1.5e-38 163.3 137 58.4
Gohir.D11G178000 Gossypium hirsutum HOM05D004334 ORTHO05D004763 1.5e-38 163.3 137 58.4
PGR119G0893 Punica granatum HOM05D004334 ORTHO05D004763 2.5e-38 162.5 137 67.2
Gorai.003G004400 Gossypium raimondii HOM05D004334 ORTHO05D004763 5.7e-38 161.4 137 67.9
arahy.Tifrunner.gnm1.ann1.R6TSSQ Arachis hypogaea HOM05D004334 ORTHO05D004763 7.4e-38 161.0 137 57.7
TWI53G1416 Tripterygium wilfordii HOM05D004334 ORTHO05D004763 7.4e-38 161.0 137 67.2
Actinidia17393 Actinidia chinensis HOM05D004334 ORTHO05D004763 9.7e-38 160.6 136 66.9
Gorai.007G189900 Gossypium raimondii HOM05D004334 ORTHO05D004763 9.7e-38 160.6 137 57.7
Thecc.01G009500 Theobroma cacao HOM05D004334 ORTHO05D004763 9.7e-38 160.6 137 67.9
Atru.chr3.934 Acer truncatum HOM05D004334 ORTHO05D004763 2.8e-37 159.1 137 69.3
CiPaw.07G005200 Carya illinoinensis HOM05D004334 ORTHO05D004763 3.7e-37 158.7 137 60.6
Duzib147G0009 Durio zibethinus HOM05D004334 ORTHO05D004763 3.7e-37 158.7 137 59.1
Cc07_g11490 Coffea canephora HOM05D004334 ORTHO05D004763 4.8e-37 158.3 137 54.0
Gohir.D03G004200 Gossypium hirsutum HOM05D004334 ORTHO05D004763 4.8e-37 158.3 137 66.4
Lj2g0016931 Lotus japonicus HOM05D004334 ORTHO05D004763 4.8e-37 158.3 137 65.7
MD02G1121800 Malus domestica HOM05D004334 ORTHO05D004763 8.2e-37 157.5 137 67.2
Potri.005G104700 Populus trichocarpa HOM05D004334 ORTHO05D004763 1.1e-36 157.1 137 62.0
MD15G1235400 Malus domestica HOM05D004334 ORTHO05D004763 1.4e-36 156.8 137 53.3
Manes.03G080400 Manihot esculenta HOM05D004334 ORTHO05D004763 1.4e-36 156.8 137 67.2
TWI73G1167 Tripterygium wilfordii HOM05D004334 ORTHO05D004763 1.4e-36 156.8 137 60.6
Actinidia02363 Actinidia chinensis HOM05D004334 ORTHO05D004763 1.8e-36 156.4 135 52.6
Ciclev10025980m.g Citrus clementina HOM05D004334 ORTHO05D004763 2.4e-36 156.0 136 65.4
FvH4_1g10780 Fragaria vesca HOM05D004334 ORTHO05D004763 3.1e-36 155.6 137 59.1
Nn6g31831 Nelumbo nucifera HOM05D004334 ORTHO05D004763 3.1e-36 155.6 138 58.0
QL06p052483 Quercus lobata HOM05D004334 ORTHO05D004763 5.3e-36 154.8 135 53.3
RcHm_v2.0_Chr2g0097961 Rosa chinensis HOM05D004334 ORTHO05D004763 6.9e-36 154.5 137 58.4
TAR376G1081 Trochodendron aralioides HOM05D004334 ORTHO05D004763 6.9e-36 154.5 137 54.7
Glyma.11G082600 Glycine max HOM05D004334 ORTHO05D004763 1.5e-35 153.3 137 63.5
Migut.H02192 Erythranthe guttata HOM05D004334 ORTHO05D004763 2.0e-35 152.9 137 57.7
Eucgr.I02283 Eucalyptus grandis HOM05D004334 ORTHO05D004763 2.0e-35 152.9 137 65.0
Medtr5g023230 Medicago truncatula HOM05D004334 ORTHO05D004763 2.0e-35 152.9 134 59.0
SalBow3G0047 Salvia bowleyana HOM05D004334 ORTHO05D004763 2.0e-35 152.9 139 54.7
Aqoxy6G01836 Aquilegia oxysepala HOM05D004334 ORTHO05D004763 2.6e-35 152.5 137 51.8
CSS0034111 Camellia sinensis var. sinensis HOM05D004334 ORTHO05D004763 2.6e-35 152.5 136 51.5
CSS0049695 Camellia sinensis var. sinensis HOM05D004334 ORTHO05D004763 2.6e-35 152.5 136 51.5
FAN26G3296 Fragaria x ananassa HOM05D004334 ORTHO05D004763 2.6e-35 152.5 137 58.4
PGSC0003DMG400001577 Solanum tuberosum HOM05D004334 ORTHO05D004763 2.6e-35 152.5 136 66.9
unitig_699.g19572 Utricularia gibba HOM05D004334 ORTHO05D004763 2.6e-35 152.5 139 52.5
FAN28G1575 Fragaria x ananassa HOM05D004334 ORTHO05D004763 4.5e-35 151.8 137 57.7
CiPaw.08G179800 Carya illinoinensis HOM05D004334 ORTHO05D004763 5.9e-35 151.4 137 59.9
Ca_24954_v3 Cicer arietinum L. HOM05D004334 ORTHO05D004763 5.9e-35 151.4 137 57.7
vmacro18446 Vaccinium macrocarpon HOM05D004334 ORTHO05D004763 5.9e-35 151.4 136 52.2
CAN.G23.17 Capsicum annuum HOM05D004334 ORTHO05D004763 1.0e-34 150.6 136 55.9
Prupe.7G177700 Prunus persica HOM05D004334 ORTHO05D004763 1.0e-34 150.6 136 64.7
MSTRG.2739 Avicennia marina HOM05D004334 ORTHO05D004763 1.3e-34 150.2 137 64.2
PGR102G0214 Punica granatum HOM05D004334 ORTHO05D004763 1.3e-34 150.2 134 59.0
CAN.G890.9 Capsicum annuum HOM05D004334 ORTHO05D004763 1.7e-34 149.8 136 66.2
Lj4A228G17 Lonicera japonica HOM05D004334 ORTHO05D004763 1.7e-34 149.8 148 56.1
Nitab4.5_0000188g0270 Nicotiana tabacum HOM05D004334 ORTHO05D004763 1.7e-34 149.8 136 66.2
Rhsim08G0028900 Rhododendron simsii HOM05D004334 ORTHO05D004763 1.7e-34 149.8 136 51.5
Oeu039717.1 Olea europaea HOM05D004334 ORTHO05D004763 2.9e-34 149.1 137 53.3
Sopen02g027910 Solanum pennellii HOM05D004334 ORTHO05D004763 2.9e-34 149.1 136 65.4
FAN19G0005 Fragaria x ananassa HOM05D004334 ORTHO05D004763 3.8e-34 148.7 149 53.7
Phvul.002G112900 Phaseolus vulgaris HOM05D004334 ORTHO05D004763 3.8e-34 148.7 137 62.0
MELO3C007955.2 Cucumis melo HOM05D004334 ORTHO05D004763 5.0e-34 148.3 137 64.2
SEGI_01463 Sequoiadendron giganteum HOM05D004334 ORTHO05D004763 5.0e-34 148.3 137 57.7
ATR0661G230 Amborella trichopoda HOM05D004334 ORTHO05D004763 6.5e-34 147.9 137 58.4
Lsat_1_v5_gn_4_143501 Lactuca sativa HOM05D004334 ORTHO05D004763 6.5e-34 147.9 136 64.0
Solyc02g083150.3 Solanum lycopersicum HOM05D004334 ORTHO05D004763 6.5e-34 147.9 137 65.7
SGA_v2.0_scaffold2G00960 Striga asiatica HOM05D004334 ORTHO05D004763 6.5e-34 147.9 138 60.9
Lalb_Chr05g0212061 Lupinus albus HOM05D004334 ORTHO05D004763 8.5e-34 147.5 138 60.9
Nn5g30900 Nelumbo nucifera HOM05D004334 ORTHO05D004763 1.1e-33 147.1 138 52.9
CSS0027377 Camellia sinensis var. sinensis HOM05D004334 ORTHO05D004763 2.5e-33 146.0 136 56.6
ClCG01G020710 Citrullus lanatus HOM05D004334 ORTHO05D004763 2.5e-33 146.0 153 50.3
CsaV3_6G047640 Cucumis sativus L. HOM05D004334 ORTHO05D004763 2.5e-33 146.0 137 62.8
Haze_03684 Corylus avellana HOM05D004334 ORTHO05D004763 3.2e-33 145.6 138 60.1
Solyc02g061810.3 Solanum lycopersicum HOM05D004334 ORTHO05D004763 3.2e-33 145.6 137 49.6
Oeu012549.1 Olea europaea HOM05D004334 ORTHO05D004763 4.2e-33 145.2 137 48.2
TPR.G25124 Trifolium pratense HOM05D004334 ORTHO05D004763 4.2e-33 145.2 134 64.2
MBI05_g39718_MAGBIO Magnolia biondii HOM05D004334 ORTHO05D004763 5.5e-33 144.8 137 56.9
Sopen02g012850 Solanum pennellii HOM05D004334 ORTHO05D004763 7.2e-33 144.4 137 48.9
Lalb_Chr09g0321381 Lupinus albus HOM05D002155 ORTHO05D004763 1.2e-32 143.7 138 55.8
Peaxi162Scf00300g00517 Petunia axillaris HOM05D004334 ORTHO05D004763 1.2e-32 143.7 137 63.5
FAN09G1010 Fragaria x ananassa HOM05D004334 ORTHO05D004763 4.6e-32 141.7 137 50.4
FAN09G3278 Fragaria x ananassa HOM05D004334 ORTHO05D004763 4.6e-32 141.7 137 50.4
Sabra07G0050700 Salix brachista HOM05D004334 ORTHO05D004763 4.6e-32 141.7 147 49.0
Cfa007045 Carpinus fangiana HOM05D004334 ORTHO05D004763 7.9e-32 141.0 137 56.9
FAN14G2747 Fragaria x ananassa HOM05D004334 ORTHO05D004763 1.8e-31 139.8 137 54.7
HanXRQChr09g0256961 Helianthus annuus HOM05D004334 ORTHO05D004763 1.8e-31 139.8 136 63.2
FvH4_6g14950 Fragaria vesca HOM05D004334 ORTHO05D004763 5.1e-31 138.3 137 54.0
SGA_v2.0_scaffold108G30985 Striga asiatica HOM05D004334 ORTHO05D004763 6.7e-31 137.9 142 54.2
Gohir.A02G175700 Gossypium hirsutum HOM05D004334 ORTHO05D004763 1.1e-30 137.1 121 66.9
Zm00001eb187020 Zea mays HOM05D004334 ORTHO05D004763 1.5e-30 136.7 137 52.6
Hma1.2p1_0315F.1_g122750 Hydrangea macrophylla HOM05D004334 ORTHO05D004763 3.3e-30 135.6 131 50.4
FAN05G4181 Fragaria x ananassa HOM05D004334 ORTHO05D004763 5.7e-30 134.8 137 48.2
Nitab4.5_0001310g0110 Nicotiana tabacum HOM05D004334 ORTHO05D004763 7.4e-30 134.4 128 64.8
PSO541G2607 Papaver somniferum HOM05D004334 ORTHO05D004763 9.7e-30 134.0 136 46.3
PSO675G0891 Papaver somniferum HOM05D004334 ORTHO05D004763 9.7e-30 134.0 136 46.3
Ah.02g129060 Amaranthus hybridus HOM05D004334 ORTHO05D004763 1.7e-29 133.3 136 57.4
unitig_27.g25346 Utricularia gibba HOM05D004334 ORTHO05D004763 2.2e-29 132.9 139 48.9
Sabra05G0086000 Salix brachista HOM05D004334 ORTHO05D004763 1.4e-28 130.2 185 49.2
Os04g0562000 Oryza sativa ssp. japonica HOM05D004334 ORTHO05D004763 3.1e-28 129.0 137 44.5
Os12g0480000 Oryza sativa ssp. japonica HOM05D004334 ORTHO05D004763 3.1e-28 129.0 137 53.3
Zm00001eb250140 Zea mays HOM05D004334 ORTHO05D004763 5.3e-28 128.3 137 46.7
FAN23G2490 Fragaria x ananassa HOM05D004334 ORTHO05D004763 2.6e-27 125.9 121 57.0
HanXRQChr15g0487491 Helianthus annuus HOM05D004334 ORTHO05D004763 4.5e-27 125.2 137 55.5
Hund03662 Selenicereus undatus HOM05D004334 ORTHO05D004763 4.5e-27 125.2 163 41.7
arahy.Tifrunner.gnm1.ann1.106C79 Arachis hypogaea HOM05D004334 ORTHO05D004763 1.1e-25 120.6 80 65.0
ECA232G0620 Erigeron canadensis HOM05D003302 ORTHO05D003785 4.2e-25 118.6 119 52.1
MBI08_g35872_MAGBIO Magnolia biondii HOM05D004334 ORTHO05D004763 1.2e-24 117.1 82 62.2
Eucgr.J02517 Eucalyptus grandis HOM05D004334 ORTHO05D004763 1.6e-24 116.7 131 54.2
DCAR_011587 Daucus carota HOM05D004334 ORTHO05D004763 4.7e-24 115.2 83 63.9
Pp3c11_17220 Physcomitrium patens HOM05D004334 ORTHO05D004763 2.0e-22 109.8 130 41.5
Lsat_1_v5_gn_2_75001 Lactuca sativa HOM05D004334 ORTHO05D004763 3.3e-22 109.0 122 45.9
CDE02G4661 Ceratophyllum demersum HOM05D004334 ORTHO05D004763 1.3e-21 107.1 115 57.4
Ah.03g134170 Amaranthus hybridus HOM05D004334 ORTHO05D004763 2.4e-20 102.8 108 47.2
EL10Ac6g13347 Beta vulgaris HOM05D004334 ORTHO05D004763 7.0e-20 101.3 137 40.1
Potri.007G060100 Populus trichocarpa HOM05D004334 ORTHO05D004763 3.5e-19 99.0 137 40.9
Pp3c2_20610 Physcomitrium patens HOM05D004334 ORTHO05D004763 1.0e-18 97.4 128 39.8
Nitab4.5_0004994g0030 Nicotiana tabacum HOM05D004334 ORTHO05D004763 2.2e-18 96.3 74 58.1
Dinv08539 Davidia involucrata HOM05D004334 ORTHO05D004763 2.5e-17 92.8 85 58.8
Peaxi162Scf00439g00007 Petunia axillaris HOM05D004334 ORTHO05D004763 2.5e-17 92.8 134 36.6
Pp3c1_15780 Physcomitrium patens HOM05D004334 ORTHO05D004763 5.2e-15 85.1 131 35.9
SMO347G0399 Selaginella moellendorffii HOM05D004334 ORTHO05D004763 4.4e-14 82.0 103 37.9
COL.COLO4_22515 Corchorus olitorius HOM05D004334 ORTHO05D004763 4.8e-13 78.6 76 68.4
Mapoly0218s0003 Marchantia polymorpha HOM05D004334 ORTHO05D004763 3.1e-12 75.9 129 31.8
Nitab4.5_0005413g0010 Nicotiana tabacum HOM05D004334 ORTHO05D004763 2.2e-10 69.7 105 54.3
PGSC0003DMG402008678 Solanum tuberosum HOM05D004334 ORTHO05D004763 2.9e-10 69.3 60 53.3
PRCOL_00005340 Prasinoderma coloniale HOM05D004334 ORTHO05D004763 8.0e-08 61.2 81 37.0
MCO11G403 Micromonas commoda HOM05D000571 ORTHO05D004763 5.7e-06 55.1 145 26.9


User provided reference genes

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