Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p23320 Brassica napus HOM05D006727 ORTHO05D008408 5.0e-131 471.1 234 100.0
BraA01t02241Z Brassica rapa HOM05D006727 ORTHO05D008408 2.5e-130 468.8 234 99.6
C01p28960 Brassica napus HOM05D006727 ORTHO05D008408 2.4e-125 452.2 234 97.0
BolC1t02827H Brassica oleracea HOM05D006727 ORTHO05D008408 3.1e-125 451.8 234 97.0
BcaC09g50100 Brassica carinata HOM05D006727 ORTHO05D008408 2.7e-124 448.7 234 96.2
BcaNung00375 Brassica carinata HOM05D006727 ORTHO05D008408 1.1e-117 426.8 233 92.3
AL5G32050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 4.3e-114 414.8 234 90.2
AT3G51610 Arabidopsis thaliana HOM05D006727 ORTHO05D008408 1.6e-113 412.9 231 90.9
CARHR161200 Cardamine hirsuta HOM05D006727 ORTHO05D008408 3.6e-113 411.8 234 90.2
Thhalv10010694m.g Eutrema salsugineum HOM05D006727 ORTHO05D008408 6.2e-113 411.0 233 88.8
Carub.0005s1797 Capsella rubella HOM05D006727 ORTHO05D008408 1.3e-110 403.3 234 88.5
Aa31sc296G30 Aethionema arabicum HOM05D006727 ORTHO05D008408 5.8e-103 377.9 232 81.0
THA.LOC104823356 Tarenaya hassleriana HOM05D006727 ORTHO05D008408 1.5e-98 363.2 227 79.3
Sp5g10660 Schrenkiella parvula HOM05D006727 ORTHO05D008408 8.1e-97 357.5 183 95.1
Thecc.04G153700 Theobroma cacao HOM05D006727 ORTHO05D008408 3.5e-92 342.0 214 77.6
Cfa017053 Carpinus fangiana HOM05D006727 ORTHO05D008408 4.6e-92 341.7 224 76.3
Gorai.011G128700 Gossypium raimondii HOM05D006727 ORTHO05D008408 1.1e-90 337.0 214 76.6
Manes.09G116800 Manihot esculenta HOM05D006727 ORTHO05D008408 2.5e-90 335.9 220 74.5
COL.COLO4_16540 Corchorus olitorius HOM05D006727 ORTHO05D008408 3.3e-90 335.5 219 74.0
Gohir.A10G149900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 3.3e-90 335.5 214 76.2
Atru.chr8.2386 Acer truncatum HOM05D006727 ORTHO05D008408 4.3e-90 335.1 213 77.0
QL07p032522 Quercus lobata HOM05D006727 ORTHO05D008408 4.3e-90 335.1 213 75.6
Gohir.D10G116900 Gossypium hirsutum HOM05D006727 ORTHO05D008408 5.6e-90 334.7 214 76.2
CiPaw.09G219900 Carya illinoinensis HOM05D006727 ORTHO05D008408 7.3e-90 334.3 230 73.0
Dinv25328 Davidia involucrata HOM05D006727 ORTHO05D008408 9.6e-90 334.0 218 75.2
MELO3C009112.2 Cucumis melo HOM05D006727 ORTHO05D008408 1.2e-89 333.6 217 75.6
GSVIVG01030200001 Vitis vinifera HOM05D006727 ORTHO05D008408 2.1e-89 332.8 220 74.1
Lalb_Chr19g0124021 Lupinus albus HOM05D006727 ORTHO05D008408 2.8e-89 332.4 214 76.2
Sed0012883 Sechium edule HOM05D006727 ORTHO05D008408 3.6e-89 332.0 217 73.7
TWI53G1665 Tripterygium wilfordii HOM05D006727 ORTHO05D008408 4.7e-89 331.6 219 74.0
Duzib212G0227 Durio zibethinus HOM05D006727 ORTHO05D008408 6.2e-89 331.3 216 75.9
CANSAT35G0523 Cannabis sativa HOM05D006727 ORTHO05D008408 8.1e-89 330.9 227 70.9
CsaV3_3G033190 Cucumis sativus L. HOM05D006727 ORTHO05D008408 8.1e-89 330.9 220 73.6
MD12G1186200 Malus domestica HOM05D006727 ORTHO05D008408 1.1e-88 330.5 219 74.4
CSS0002185 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 1.8e-88 329.7 222 72.5
Dinv11373 Davidia involucrata HOM05D006727 ORTHO05D008408 2.4e-88 329.3 219 72.6
Potri.016G134700 Populus trichocarpa HOM05D006727 ORTHO05D008408 3.1e-88 328.9 220 72.7
Prupe.6G291700 Prunus persica HOM05D006727 ORTHO05D008408 3.1e-88 328.9 214 74.8
TAR220G0001 Trochodendron aralioides HOM05D006727 ORTHO05D008408 3.1e-88 328.9 215 75.8
Sabra04G0152100 Salix brachista HOM05D006727 ORTHO05D008408 4.0e-88 328.6 241 68.5
CSS0012941 Camellia sinensis var. sinensis HOM05D006727 ORTHO05D008408 5.2e-88 328.2 222 72.1
Hund03725 Selenicereus undatus HOM05D006727 ORTHO05D008408 1.2e-87 327.0 215 73.5
SGA_v2.0_scaffold373G50173 Striga asiatica HOM05D006727 ORTHO05D008408 3.4e-87 325.5 214 71.5
Migut.J00054 Erythranthe guttata HOM05D006727 ORTHO05D008408 4.4e-87 325.1 218 71.1
FAN14G1566 Fragaria x ananassa HOM05D006727 ORTHO05D008408 4.4e-87 325.1 230 70.9
Glyma.18G215000 Glycine max HOM05D006727 ORTHO05D008408 4.4e-87 325.1 230 71.3
Rhsim05G0229700 Rhododendron simsii HOM05D006727 ORTHO05D008408 5.8e-87 324.7 226 71.7
HanXRQChr01g0000191 Helianthus annuus HOM05D006727 ORTHO05D008408 1.3e-86 323.6 230 71.3
TPR.G26930 Trifolium pratense HOM05D006727 ORTHO05D008408 1.3e-86 323.6 214 72.4
Peaxi162Scf00732g00434 Petunia axillaris HOM05D006727 ORTHO05D008408 1.7e-86 323.2 214 73.4
Phvul.008G083900 Phaseolus vulgaris HOM05D006727 ORTHO05D008408 1.7e-86 323.2 215 73.0
RcHm_v2.0_Chr3g0460801 Rosa chinensis HOM05D006727 ORTHO05D008408 2.2e-86 322.8 230 70.4
arahy.Tifrunner.gnm1.ann1.SP3HKJ Arachis hypogaea HOM05D006727 ORTHO05D008408 2.9e-86 322.4 217 73.3
Nitab4.5_0000950g0010 Nicotiana tabacum HOM05D006727 ORTHO05D008408 2.9e-86 322.4 219 72.6
arahy.Tifrunner.gnm1.ann1.U8U4T8 Arachis hypogaea HOM05D006727 ORTHO05D008408 3.8e-86 322.0 217 72.8
FvH4_6g10100 Fragaria vesca HOM05D006727 ORTHO05D008408 4.9e-86 321.6 230 70.4
FAN02G0358 Fragaria x ananassa HOM05D006727 ORTHO05D008408 6.4e-86 321.2 230 70.4
Lj1g0012647 Lotus japonicus HOM05D006727 ORTHO05D008408 1.1e-85 320.5 208 71.2
Medtr7g072680 Medicago truncatula HOM05D006727 ORTHO05D008408 1.1e-85 320.5 204 74.5
FAN05G1856 Fragaria x ananassa HOM05D006727 ORTHO05D008408 1.9e-85 319.7 230 70.4
Psat3g120440 Pisum sativum HOM05D006727 ORTHO05D008408 7.1e-85 317.8 214 71.0
MSTRG.18948 Avicennia marina HOM05D006727 ORTHO05D008408 1.2e-84 317.0 219 69.4
ECA248G2137 Erigeron canadensis HOM05D006727 ORTHO05D008408 1.2e-84 317.0 201 76.1
EL10Ac7g17073 Beta vulgaris HOM05D006727 ORTHO05D008408 1.6e-84 316.6 213 71.8
Glyma.09G276200 Glycine max HOM05D006727 ORTHO05D008408 1.6e-84 316.6 230 71.3
MD04G1172900 Malus domestica HOM05D006727 ORTHO05D008408 2.1e-84 316.2 230 67.4
PGR004G2541 Punica granatum HOM05D006727 ORTHO05D008408 2.1e-84 316.2 233 68.2
FAN05G4632 Fragaria x ananassa HOM05D006727 ORTHO05D008408 3.5e-84 315.5 230 69.6
PSO017G7044 Papaver somniferum HOM05D006727 ORTHO05D008408 4.6e-84 315.1 217 70.0
Sc19g0002650 Simmondsia chinensis HOM05D006727 ORTHO05D008408 4.6e-84 315.1 214 70.6
Lsat_1_v5_gn_5_150061 Lactuca sativa HOM05D006727 ORTHO05D008408 6.0e-84 314.7 226 70.4
Ciclev10012697m.g Citrus clementina HOM05D006727 ORTHO05D008408 5.1e-83 311.6 220 67.7
Aqoxy4G02378 Aquilegia oxysepala HOM05D006727 ORTHO05D008408 6.6e-83 311.2 218 71.1
Cc06_g00470 Coffea canephora HOM05D006727 ORTHO05D008408 1.5e-82 310.1 220 67.3
HPP92_001138 Vanilla planifolia HOM05D006727 ORTHO05D008408 2.8e-81 305.8 210 70.0
Os05g0168400 Oryza sativa ssp. japonica HOM05D006727 ORTHO05D008408 4.5e-79 298.5 212 67.9
Zm00001eb281990 Zea mays HOM05D006727 ORTHO05D008408 4.5e-79 298.5 214 66.4
Eucgr.K01278 Eucalyptus grandis HOM05D006727 ORTHO05D008408 7.6e-79 297.7 215 67.4
ATR0681G348 Amborella trichopoda HOM05D006727 ORTHO05D008408 2.2e-78 296.2 203 67.5
Haze_21159 Corylus avellana HOM05D006727 ORTHO05D008408 9.3e-77 290.8 181 77.9
vmacro20362 Vaccinium macrocarpon HOM05D006727 ORTHO05D008408 9.6e-74 280.8 226 64.6
PSO170G4157 Papaver somniferum HOM05D006727 ORTHO05D008408 1.3e-73 280.4 181 73.5
Oeu026955.4 Olea europaea HOM05D006727 ORTHO05D008408 9.0e-72 274.2 254 56.3
Nn2g10333 Nelumbo nucifera HOM05D006727 ORTHO05D008408 2.0e-71 273.1 172 75.0
CDE04G1801 Ceratophyllum demersum HOM05D006727 ORTHO05D008408 1.3e-70 270.4 171 71.3
unitig_749.g14090 Utricularia gibba HOM05D006727 ORTHO05D008408 4.6e-68 261.9 198 62.1
Ah.15g090120 Amaranthus hybridus HOM05D006727 ORTHO05D008408 8.1e-65 251.1 215 60.0
CAN.G119.2 Capsicum annuum HOM05D006727 ORTHO05D008408 2.4e-64 249.6 152 76.3
Mapoly0003s0079 Marchantia polymorpha HOM05D006727 ORTHO05D008408 2.0e-63 246.5 214 55.1
TAR623G1271 Trochodendron aralioides HOM05D006727 ORTHO05D008408 1.1e-61 240.7 214 61.7
FAN09G3050 Fragaria x ananassa HOM05D006727 ORTHO05D008408 4.2e-61 238.8 173 68.8
SMO356G0277 Selaginella moellendorffii HOM05D006727 ORTHO05D008408 1.0e-59 234.2 192 54.7
ClCG10G022640 Citrullus lanatus HOM05D006727 ORTHO05D008408 2.5e-58 229.6 217 58.5
AUR62006372 Chenopodium quinoa HOM05D006727 ORTHO05D008408 2.4e-56 223.0 219 53.9
Pp3c2_32200 Physcomitrium patens HOM05D006727 ORTHO05D008408 1.7e-54 216.9 218 50.0
Nitab4.5_0000330g0040 Nicotiana tabacum HOM05D006727 ORTHO05D008408 5.1e-51 205.3 142 70.4
Actinidia20787 Actinidia chinensis HOM05D006727 ORTHO05D008408 1.5e-50 203.8 129 74.4
BraA09t39934Z Brassica rapa HOM05D006727 ORTHO05D008408 1.2e-47 194.1 131 77.9
A09p44730 Brassica napus HOM05D006727 ORTHO05D008408 1.5e-47 193.7 131 76.3
Ca_07756_v3 Cicer arietinum L. HOM05D006727 ORTHO05D008408 7.7e-47 191.4 120 73.3
AagrBONN_evm.TU.Sc2ySwM_344.2624 Anthoceros agrestis HOM05D006727 ORTHO05D008408 1.0e-43 181.0 148 52.7
SHI12925 Sapria himalayana HOM05D006727 ORTHO05D008408 5.1e-43 178.7 117 69.2
Sopen03g037430 Solanum pennellii HOM05D006727 ORTHO05D008408 1.5e-39 167.2 118 68.6
Oeu060435.2 Olea europaea HOM05D006727 ORTHO05D008408 1.4e-37 160.6 102 71.6
Cre01.g049450 Chlamydomonas reinhardtii HOM05D006727 ORTHO05D008408 1.0e-35 154.5 209 37.3
AL1G25050 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 9.4e-29 131.3 81 79.0
PRCOL_00001207 Prasinoderma coloniale HOM05D006727 ORTHO05D008408 4.7e-28 129.0 187 32.1
MCO09G625 Micromonas commoda HOM05D006727 ORTHO05D008408 3.0e-27 126.3 171 34.5
Sopen03g037400 Solanum pennellii HOM05D006727 ORTHO05D008408 1.7e-25 120.6 76 76.3
AagrBONN_evm.TU.Sc2ySwM_344.2622 Anthoceros agrestis HOM05D006727 ORTHO05D008408 2.8e-25 119.8 100 52.0
Solyc03g118520.4 Solanum lycopersicum HOM05D006727 ORTHO05D008408 4.8e-25 119.0 81 72.8
BolC8t50296H Brassica oleracea HOM05D006727 ORTHO05D008408 7.7e-23 111.7 74 74.3
AL8G15680 Arabidopsis lyrata HOM05D006727 ORTHO05D008408 1.7e-22 110.5 54 92.6
PSO017G2966 Papaver somniferum HOM05D004863 ORTHO05D005802 1.7e-22 110.5 74 64.9
SEGI_08771 Sequoiadendron giganteum HOM05D006727 ORTHO05D008408 8.0e-20 101.7 59 69.5
Carub.0007s3202 Capsella rubella HOM05D006727 ORTHO05D008408 1.4e-19 100.9 58 96.6
A03p48380 Brassica napus HOM05D023373 ORTHO05D024557 2.9e-14 83.2 194 39.7
BcaB01g00436 Brassica carinata HOM05D006727 ORTHO05D008408 8.8e-11 71.6 61 67.2
MD12G1088300 Malus domestica HOM05D006727 ORTHO05D008408 7.5e-10 68.6 60 60.0


User provided reference genes

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