Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p22820 Brassica napus HOM05D000585 ORTHO05D003019 2.9e-168 595.1 298 100.0
BraA01t02194Z Brassica rapa HOM05D000585 ORTHO05D003019 5.4e-154 547.7 359 80.2
BcaC09g50156 Brassica carinata HOM05D000585 ORTHO05D003019 4.3e-143 511.5 370 73.0
BolC1t02769H Brassica oleracea HOM05D000585 ORTHO05D003019 4.3e-143 511.5 370 73.0
C01p28400 Brassica napus HOM05D000585 ORTHO05D003019 1.2e-142 510.0 370 72.7
BcaNung00337 Brassica carinata HOM05D000585 ORTHO05D003019 1.3e-115 420.2 360 66.7
Sp7g12880 Schrenkiella parvula HOM05D000585 ORTHO05D003019 4.4e-108 395.2 380 60.8
BcaC07g37850 Brassica carinata HOM05D000585 ORTHO05D003019 3.4e-100 369.0 373 57.9
BolC8t48241H Brassica oleracea HOM05D000585 ORTHO05D003019 1.3e-99 367.1 373 57.9
AL7G41170 Arabidopsis lyrata HOM05D000585 ORTHO05D003019 7.9e-97 357.8 383 57.7
CARHR221250 Cardamine hirsuta HOM05D000585 ORTHO05D003019 1.0e-96 357.5 392 54.8
A08p11460 Brassica napus HOM05D000585 ORTHO05D003019 4.0e-93 345.5 369 56.4
BraA08t33140Z Brassica rapa HOM05D000585 ORTHO05D003019 4.0e-93 345.5 369 56.4
Carub.0007s2739 Capsella rubella HOM05D000585 ORTHO05D003019 8.4e-91 337.8 389 55.0
BcaB04g18260 Brassica carinata HOM05D000585 ORTHO05D003019 1.1e-90 337.4 374 55.3
AT4G14750 Arabidopsis thaliana HOM05D000585 ORTHO05D003019 3.5e-89 332.4 385 54.8
Thhalv10025526m.g Eutrema salsugineum HOM05D000585 ORTHO05D003019 1.2e-76 290.8 381 49.9
Aa31LG9G2620 Aethionema arabicum HOM05D000585 ORTHO05D003019 9.1e-69 264.6 412 44.7
THA.LOC104827553 Tarenaya hassleriana HOM05D000585 ORTHO05D003019 5.7e-55 218.8 417 39.8
THA.LOC104803054 Tarenaya hassleriana HOM05D000585 ORTHO05D003019 1.3e-51 207.6 200 59.5
THA.LOC104822514 Tarenaya hassleriana HOM05D000585 ORTHO05D003019 2.9e-51 206.5 211 54.5
arahy.Tifrunner.gnm1.ann1.MLEZ7Y Arachis hypogaea HOM05D000585 ORTHO05D003019 4.1e-37 159.5 460 33.9
arahy.Tifrunner.gnm1.ann1.F73KQI Arachis hypogaea HOM05D000585 ORTHO05D003019 1.6e-36 157.5 459 33.3
Cfa008456 Carpinus fangiana HOM05D000585 ORTHO05D003019 3.5e-36 156.4 469 33.3
GSVIVG01018029001 Vitis vinifera HOM05D000585 ORTHO05D003019 1.3e-35 154.5 447 32.7
Oeu008863.2 Olea europaea HOM05D000585 ORTHO05D003019 2.3e-35 153.7 423 34.5
TPR.G25172 Trifolium pratense HOM05D000585 ORTHO05D003019 7.3e-34 148.7 441 33.3
Potri.010G082600 Populus trichocarpa HOM05D000585 ORTHO05D003019 1.2e-33 147.9 432 33.6
CiPaw.01G196600 Carya illinoinensis HOM05D000585 ORTHO05D003019 3.6e-33 146.4 472 32.8
Ca_10859_v3 Cicer arietinum L. HOM05D000585 ORTHO05D003019 4.7e-33 146.0 454 31.5
FAN17G1106 Fragaria x ananassa HOM05D000585 ORTHO05D003019 8.0e-33 145.2 477 31.7
SGA_v2.0_scaffold191G40448 Striga asiatica HOM05D000585 ORTHO05D003019 8.0e-33 145.2 325 39.7
Medtr1g041430 Medicago truncatula HOM05D000585 ORTHO05D003019 1.0e-32 144.8 433 34.2
CsaV3_3G012950 Cucumis sativus L. HOM05D000585 ORTHO05D003019 1.4e-32 144.4 447 32.9
FAN22G2234 Fragaria x ananassa HOM05D000585 ORTHO05D003019 1.4e-32 144.4 473 31.7
Actinidia08468 Actinidia chinensis HOM05D000585 ORTHO05D003019 1.8e-32 144.1 439 32.6
Duzib052G0772 Durio zibethinus HOM05D000585 ORTHO05D003019 1.8e-32 144.1 466 32.0
Lj3A729T49 Lonicera japonica HOM05D000585 ORTHO05D003019 1.8e-32 144.1 459 32.0
ClCG05G004910 Citrullus lanatus HOM05D000585 ORTHO05D003019 2.3e-32 143.7 449 32.5
MELO3C006504.2 Cucumis melo HOM05D000585 ORTHO05D003019 3.0e-32 143.3 427 33.0
Eucgr.B01029 Eucalyptus grandis HOM05D000585 ORTHO05D003019 3.0e-32 143.3 478 30.8
Eucgr.B00932 Eucalyptus grandis HOM05D000585 ORTHO05D003019 4.0e-32 142.9 478 31.8
Medtr1g103070 Medicago truncatula HOM05D000585 ORTHO05D003019 4.0e-32 142.9 453 31.6
MD16G1198400 Malus domestica HOM05D000585 ORTHO05D003019 5.2e-32 142.5 470 31.5
RcHm_v2.0_Chr4g0387551 Rosa chinensis HOM05D000585 ORTHO05D003019 5.2e-32 142.5 477 31.0
Sed0022543 Sechium edule HOM05D000585 ORTHO05D003019 6.8e-32 142.1 424 32.5
Oeu053307.1 Olea europaea HOM05D000585 ORTHO05D003019 1.5e-31 141.0 446 31.6
QL06p001313 Quercus lobata HOM05D000585 ORTHO05D003019 1.5e-31 141.0 479 32.4
TPR.G26099 Trifolium pratense HOM05D000585 ORTHO05D003019 1.5e-31 141.0 456 30.7
FAN12G2946 Fragaria x ananassa HOM05D000585 ORTHO05D003019 2.0e-31 140.6 473 31.3
Thecc.04G237400 Theobroma cacao HOM05D000585 ORTHO05D003019 2.0e-31 140.6 478 31.8
Atru.chr4.2401 Acer truncatum HOM05D000585 ORTHO05D003019 2.6e-31 140.2 472 31.6
Cc03_g04190 Coffea canephora HOM05D000585 ORTHO05D003019 2.6e-31 140.2 474 32.5
Sabra10G0060500 Salix brachista HOM05D000585 ORTHO05D003019 2.6e-31 140.2 457 31.1
arahy.Tifrunner.gnm1.ann1.52TGP1 Arachis hypogaea HOM05D000585 ORTHO05D003019 3.4e-31 139.8 432 31.5
arahy.Tifrunner.gnm1.ann1.D45XKE Arachis hypogaea HOM05D000585 ORTHO05D003019 3.4e-31 139.8 432 31.5
Nn6g34148 Nelumbo nucifera HOM05D000585 ORTHO05D003019 3.4e-31 139.8 468 31.6
Atru.chr4.2377 Acer truncatum HOM05D000585 ORTHO05D003019 4.4e-31 139.4 472 31.4
FvH4_4g01000 Fragaria vesca HOM05D000585 ORTHO05D003019 4.4e-31 139.4 474 30.8
Psat6g205440 Pisum sativum HOM05D000585 ORTHO05D003019 7.5e-31 138.7 449 32.1
Prupe.1G020000 Prunus persica HOM05D000585 ORTHO05D003019 1.3e-30 137.9 169 52.7
TWI09G0946 Tripterygium wilfordii HOM05D000585 ORTHO05D003019 1.3e-30 137.9 471 32.1
TWI73G1076 Tripterygium wilfordii HOM05D000585 ORTHO05D003019 1.7e-30 137.5 465 30.8
Ciclev10004919m.g Citrus clementina HOM05D000585 ORTHO05D003019 2.2e-30 137.1 477 31.0
DCAR_030682 Daucus carota HOM05D000585 ORTHO05D003019 2.2e-30 137.1 468 30.8
Aqoxy2G03447 Aquilegia oxysepala HOM05D000585 ORTHO05D003019 2.9e-30 136.7 454 31.3
CANSAT78G1820 Cannabis sativa HOM05D000585 ORTHO05D003019 2.9e-30 136.7 472 32.0
Dinv14037 Davidia involucrata HOM05D000585 ORTHO05D003019 2.9e-30 136.7 470 32.1
Manes.15G032200 Manihot esculenta HOM05D000585 ORTHO05D003019 1.1e-29 134.8 480 31.5
Ca_12152_v3 Cicer arietinum L. HOM05D000585 ORTHO05D003019 1.4e-29 134.4 438 31.1
COL.COLO4_21550 Corchorus olitorius HOM05D000585 ORTHO05D003019 1.4e-29 134.4 483 30.8
Duzib212G0580 Durio zibethinus HOM05D000585 ORTHO05D003019 1.8e-29 134.0 459 31.8
Peaxi162Scf00316g01115 Petunia axillaris HOM05D000585 ORTHO05D003019 1.8e-29 134.0 373 34.6
Actinidia18531 Actinidia chinensis HOM05D000585 ORTHO05D003019 2.4e-29 133.7 452 31.4
MD13G1198300 Malus domestica HOM05D000585 ORTHO05D003019 2.4e-29 133.7 167 53.3
Psat6g104080 Pisum sativum HOM05D000585 ORTHO05D003019 2.4e-29 133.7 435 32.4
Potri.008G156700 Populus trichocarpa HOM05D000585 ORTHO05D003019 3.2e-29 133.3 463 30.5
Sc13g0004650 Simmondsia chinensis HOM05D000585 ORTHO05D003019 4.1e-29 132.9 169 51.5
TAR362G0507 Trochodendron aralioides HOM05D000585 ORTHO05D003019 4.1e-29 132.9 460 30.9
TAR365G0441 Trochodendron aralioides HOM05D000585 ORTHO05D003019 4.1e-29 132.9 479 31.3
Lalb_Chr03g0037411 Lupinus albus HOM05D000585 ORTHO05D003019 5.4e-29 132.5 449 31.4
PSO210G2806 Papaver somniferum HOM05D000585 ORTHO05D003019 5.4e-29 132.5 482 30.1
TAR636G3099 Trochodendron aralioides HOM05D000585 ORTHO05D003019 7.0e-29 132.1 464 31.2
Sabra08G0119300 Salix brachista HOM05D000585 ORTHO05D003019 9.2e-29 131.7 475 30.3
PGR142G1588 Punica granatum HOM05D000585 ORTHO05D003019 1.6e-28 131.0 457 30.4
MSTRG.4056 Avicennia marina HOM05D000585 ORTHO05D003019 2.0e-28 130.6 477 30.2
EL10Ac3g06460 Beta vulgaris HOM05D000585 ORTHO05D003019 2.0e-28 130.6 199 45.7
Lj5g0007146 Lotus japonicus HOM05D000585 ORTHO05D003019 2.0e-28 130.6 468 30.3
Duzib151G0899 Durio zibethinus HOM05D000585 ORTHO05D003019 2.7e-28 130.2 169 52.1
Glyma.20G149600 Glycine max HOM05D000585 ORTHO05D003019 7.8e-28 128.6 176 47.2
Glyma.10G245000 Glycine max HOM05D000585 ORTHO05D003019 1.7e-27 127.5 465 29.5
Haze_11226 Corylus avellana HOM05D000585 ORTHO05D003019 3.0e-27 126.7 476 31.1
PSO170G4407 Papaver somniferum HOM05D000585 ORTHO05D003019 3.0e-27 126.7 482 29.7
Manes.03G173900 Manihot esculenta HOM05D000585 ORTHO05D003019 5.0e-27 125.9 479 30.9
Lsat_1_v5_gn_7_47860 Lactuca sativa HOM05D000585 ORTHO05D003019 8.6e-27 125.2 369 32.0
Phvul.007G060900 Phaseolus vulgaris HOM05D000585 ORTHO05D003019 1.1e-26 124.8 169 50.3
Cpa.g.sc44.113 Carica papaya HOM05D000585 ORTHO05D003019 1.5e-26 124.4 167 50.3
Glyma.02G004600 Glycine max HOM05D000585 ORTHO05D003019 1.5e-26 124.4 430 32.3
ECA236G2779 Erigeron canadensis HOM05D000585 ORTHO05D003019 2.5e-26 123.6 390 32.1
HanXRQChr05g0143221 Helianthus annuus HOM05D000585 ORTHO05D003019 2.5e-26 123.6 386 32.1
Hund12091 Selenicereus undatus HOM05D000585 ORTHO05D003019 2.5e-26 123.6 201 44.8
ECA240G2949 Erigeron canadensis HOM05D000585 ORTHO05D003019 3.3e-26 123.2 371 33.4
VMungo0720G0766 Vigna mungo HOM05D000585 ORTHO05D003019 3.3e-26 123.2 454 30.2
MSTRG.9956 Avicennia marina HOM05D000585 ORTHO05D003019 4.3e-26 122.9 176 47.7
AUR62034701 Chenopodium quinoa HOM05D000585 ORTHO05D003019 4.3e-26 122.9 172 48.3
AUR62043724 Chenopodium quinoa HOM05D000585 ORTHO05D003019 4.3e-26 122.9 172 48.3
Lsat_1_v5_gn_8_60501 Lactuca sativa HOM05D000585 ORTHO05D003019 7.3e-26 122.1 379 32.5
Migut.G00377 Erythranthe guttata HOM05D000585 ORTHO05D003019 9.5e-26 121.7 179 45.3
Gohir.D09G220820 Gossypium hirsutum HOM05D000585 ORTHO05D003019 9.5e-26 121.7 414 31.9
Rhsim02G0028400 Rhododendron simsii HOM05D000585 ORTHO05D003019 9.5e-26 121.7 469 29.9
CSS0004802 Camellia sinensis var. sinensis HOM05D000585 ORTHO05D003019 1.2e-25 121.3 452 30.5
CiPaw.02G121900 Carya illinoinensis HOM05D000585 ORTHO05D003019 1.2e-25 121.3 181 48.6
CsaV3_2G013480 Cucumis sativus L. HOM05D000585 ORTHO05D003019 1.2e-25 121.3 464 30.2
Actinidia04519 Actinidia chinensis HOM05D000585 ORTHO05D003019 2.1e-25 120.6 156 51.3
HPP92_007954 Vanilla planifolia HOM05D000585 ORTHO05D003019 2.8e-25 120.2 438 30.4
Gohir.A09G218500 Gossypium hirsutum HOM05D000585 ORTHO05D003019 3.6e-25 119.8 412 32.5
MELO3C014290.2 Cucumis melo HOM05D000585 ORTHO05D003019 4.7e-25 119.4 467 29.8
Glyma.10G003700 Glycine max HOM05D000585 ORTHO05D003019 4.7e-25 119.4 444 30.9
CSS0013848 Camellia sinensis var. sinensis HOM05D000585 ORTHO05D003019 8.0e-25 118.6 156 50.0
Sopen09g031420 Solanum pennellii HOM05D000585 ORTHO05D003019 1.0e-24 118.2 456 29.6
CAN.G1402.14 Capsicum annuum HOM05D000585 ORTHO05D003019 1.4e-24 117.9 412 31.1
Gorai.011G167700 Gossypium raimondii HOM05D000585 ORTHO05D003019 1.8e-24 117.5 384 30.7
MBI11_g04238_MAGBIO Magnolia biondii HOM05D000585 ORTHO05D003019 1.8e-24 117.5 178 46.1
Phvul.007G277500 Phaseolus vulgaris HOM05D000585 ORTHO05D003019 2.3e-24 117.1 450 30.0
ClCG06G006420 Citrullus lanatus HOM05D000585 ORTHO05D003019 4.0e-24 116.3 476 28.6
HanXRQChr03g0064051 Helianthus annuus HOM05D000585 ORTHO05D003019 4.0e-24 116.3 342 33.6
Sed0026798 Sechium edule HOM05D000585 ORTHO05D003019 5.2e-24 115.9 413 31.7
Gohir.D10G150666 Gossypium hirsutum HOM05D000585 ORTHO05D003019 1.5e-23 114.4 335 34.9
PGSC0003DMG400006444 Solanum tuberosum HOM05D000585 ORTHO05D003019 1.3e-22 111.3 189 41.8
PGR004G0742 Punica granatum HOM05D000585 ORTHO05D003019 2.9e-22 110.2 461 28.4
CDE06G1490 Ceratophyllum demersum HOM05D000585 ORTHO05D003019 4.9e-22 109.4 457 29.8
Gorai.006G241800 Gossypium raimondii HOM05D000585 ORTHO05D003019 8.3e-22 108.6 440 30.2
SalBow2G3221 Salvia bowleyana HOM05D000585 ORTHO05D003019 1.1e-21 108.2 395 30.6
ATR0665G458 Amborella trichopoda HOM05D000585 ORTHO05D003019 1.4e-21 107.8 180 46.1
Solyc09g082560.4 Solanum lycopersicum HOM05D000585 ORTHO05D003019 1.4e-21 107.8 188 41.5
Sed0022726 Sechium edule HOM05D000585 ORTHO05D003019 5.4e-21 105.9 423 30.0
Ah.01g018370 Amaranthus hybridus HOM05D000585 ORTHO05D003019 9.2e-21 105.1 427 28.6
PSO210G6900 Papaver somniferum HOM05D000585 ORTHO05D003019 1.6e-20 104.4 156 48.1
VMungo0720G1515 Vigna mungo HOM05D000585 ORTHO05D003019 3.5e-20 103.2 464 28.2
PSO832G2375 Papaver somniferum HOM05D000585 ORTHO05D003019 6.0e-20 102.4 227 39.2
Lalb_Chr02g0140691 Lupinus albus HOM05D000585 ORTHO05D003019 1.3e-19 101.3 170 44.1
Aqoxy5G00416 Aquilegia oxysepala HOM05D000585 ORTHO05D003019 2.3e-19 100.5 453 29.8
DCAR_027238 Daucus carota HOM05D000585 ORTHO05D003019 5.0e-19 99.4 228 35.5
MSTRG.21871 Avicennia marina HOM05D000585 ORTHO05D003019 6.2e-17 92.4 440 26.8
CDE10G0737 Ceratophyllum demersum HOM05D000585 ORTHO05D003019 2.3e-16 90.5 155 47.1
CDE10G0243 Ceratophyllum demersum HOM05D000585 ORTHO05D003019 1.5e-15 87.8 154 46.1
Lalb_Chr01g0020931 Lupinus albus HOM05D000585 ORTHO05D003019 2.6e-15 87.0 200 35.0
Zm00001eb047820 Zea mays HOM05D000585 ORTHO05D003019 2.6e-15 87.0 427 26.5
Nitab4.5_0005470g0010 Nicotiana tabacum HOM05D000585 ORTHO05D003019 4.4e-15 86.3 422 28.2
unitig_748.g7304 Utricularia gibba HOM05D000585 ORTHO05D003019 8.3e-14 82.0 426 27.0
GSVIVG01021830001 Vitis vinifera HOM05D000585 ORTHO05D003019 1.1e-13 81.6 384 29.7
Thecc.05G287200 Theobroma cacao HOM05D000585 ORTHO05D003019 7.1e-13 79.0 381 27.0
Dinv44569 Davidia involucrata HOM05D000585 ORTHO05D003019 9.2e-13 78.6 150 38.7
Prupe.6G341200 Prunus persica HOM05D000585 ORTHO05D003019 2.1e-12 77.4 328 29.3
Nitab4.5_0000085g0220 Nicotiana tabacum HOM05D000585 ORTHO05D003019 8.6e-11 72.0 432 25.9
unitig_748.g8331 Utricularia gibba HOM05D000585 ORTHO05D003019 1.1e-10 71.6 186 33.3
Zm00001eb403360 Zea mays HOM05D000585 ORTHO05D003019 1.5e-10 71.2 170 40.6
Os03g0161400 Oryza sativa ssp. japonica HOM05D000585 ORTHO05D003019 9.5e-10 68.6 152 39.5
CANSAT54G1360 Cannabis sativa HOM05D000585 ORTHO05D003019 1.6e-09 67.8 296 27.7
Zm00001eb050910 Zea mays HOM05D000585 ORTHO05D003019 1.6e-09 67.8 171 39.2
FAN09G4130 Fragaria x ananassa HOM05D000585 ORTHO05D003019 2.1e-09 67.4 330 26.7
SEGI_17419 Sequoiadendron giganteum HOM05D000585 ORTHO05D003019 4.7e-09 66.2 180 34.4
FvH4_6g03280 Fragaria vesca HOM05D000585 ORTHO05D003019 1.1e-08 65.1 121 36.4
FAN14G1943 Fragaria x ananassa HOM05D000585 ORTHO05D003019 1.1e-08 65.1 121 36.4
QL08p041652 Quercus lobata HOM05D000585 ORTHO05D003019 1.4e-08 64.7 93 44.1
Duzib177G0969 Durio zibethinus HOM05D000585 ORTHO05D003019 2.3e-08 63.9 184 33.2
Os03g0636700 Oryza sativa ssp. japonica HOM05D000585 ORTHO05D003019 3.1e-08 63.5 177 38.4
MBI11_g35088_MAGBIO Magnolia biondii HOM05D000585 ORTHO05D003019 5.2e-08 62.8 104 46.2
FAN02G1864 Fragaria x ananassa HOM05D000585 ORTHO05D003019 8.9e-08 62.0 121 35.5
arahy.Tifrunner.gnm1.ann1.72L6K1 Arachis hypogaea HOM05D000585 ORTHO05D003019 1.2e-07 61.6 384 27.9
arahy.Tifrunner.gnm1.ann1.QYZ87E Arachis hypogaea HOM05D000585 ORTHO05D003019 2.0e-07 60.8 384 27.3
Dinv44570 Davidia involucrata HOM05D000585 ORTHO05D003019 2.0e-07 60.8 108 42.6
PGR004G0878 Punica granatum HOM05D000585 ORTHO05D003019 2.0e-07 60.8 178 30.9
RcHm_v2.0_Chr3g0451751 Rosa chinensis HOM05D000585 ORTHO05D003019 2.0e-07 60.8 120 36.7
Hma1.2p1_0902F.1_g234750 Hydrangea macrophylla HOM05D000585 ORTHO05D003019 5.8e-07 59.3 213 30.0
Eucgr.H04381 Eucalyptus grandis HOM05D000585 ORTHO05D003019 9.9e-07 58.5 405 24.4
Aqoxy7G01391 Aquilegia oxysepala HOM05D000585 ORTHO05D001841 1.7e-06 57.8 91 44.0
COL.COLO4_34731 Corchorus olitorius HOM05D000585 ORTHO05D001841 1.7e-06 57.8 125 36.8
CDE07G1410 Ceratophyllum demersum HOM05D000585 ORTHO05D003019 2.2e-06 57.4 371 25.1
RcHm_v2.0_Chr7g0199041 Rosa chinensis HOM05D000585 ORTHO05D001977 2.9e-06 57.0 169 31.4
Zm00001eb073660 Zea mays HOM05D000585 ORTHO05D001977 3.8e-06 56.6 44 68.2
CiPaw.11G140100 Carya illinoinensis HOM05D000585 ORTHO05D001977 4.9e-06 56.2 178 31.5
SEGI_04071 Sequoiadendron giganteum HOM05D000585 ORTHO05D001841 4.9e-06 56.2 96 41.7
Medtr8g102400 Medicago truncatula HOM05D000585 ORTHO05D001841 8.4e-06 55.5 124 36.3


User provided reference genes

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