Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 3.8e-74 281.6 157 100.0
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 1.1e-73 280.0 157 98.7
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 2.4e-73 278.9 157 98.1
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 3.2e-73 278.5 157 98.1
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 2.7e-72 275.4 157 96.8
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 1.3e-71 273.1 161 95.7
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 3.4e-67 258.5 161 90.1
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 4.6e-64 248.1 161 85.7
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 1.0e-58 230.3 161 82.0
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 1.9e-57 226.1 163 78.5
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 2.5e-57 225.7 159 81.1
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 3.6e-56 221.9 161 77.6
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 1.8e-55 219.5 161 78.3
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 3.8e-50 201.8 156 71.8
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 3.7e-45 185.3 154 68.8
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 2.4e-44 182.6 152 68.4
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 1.4e-39 166.8 154 61.0
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 3.9e-39 165.2 157 59.2
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 6.7e-39 164.5 149 62.4
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 8.8e-39 164.1 150 58.7
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 2.0e-38 162.9 133 63.9
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 2.6e-38 162.5 150 60.7
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 4.4e-38 161.8 157 56.1
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 4.4e-38 161.8 157 58.6
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 4.4e-38 161.8 147 59.9
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 9.7e-38 160.6 148 61.5
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 2.2e-37 159.5 130 64.6
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 2.8e-37 159.1 142 61.3
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 3.7e-37 158.7 156 56.4
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 6.3e-37 157.9 147 59.2
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 1.1e-36 157.1 151 58.3
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 1.1e-36 157.1 152 59.9
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 1.1e-36 157.1 152 59.9
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 1.4e-36 156.8 132 62.1
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 1.8e-36 156.4 150 57.3
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 1.8e-36 156.4 142 62.0
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 1.8e-36 156.4 142 59.2
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 1.8e-36 156.4 116 69.8
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 2.4e-36 156.0 149 59.7
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 4.1e-36 155.2 153 57.5
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 5.3e-36 154.8 130 63.1
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 5.3e-36 154.8 144 60.4
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 5.3e-36 154.8 154 55.8
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 7.0e-36 154.5 142 59.2
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 7.0e-36 154.5 146 59.6
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 7.0e-36 154.5 137 59.9
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 9.1e-36 154.1 157 56.1
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 1.2e-35 153.7 112 70.5
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.6e-35 153.3 140 58.6
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.6e-35 153.3 140 58.6
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 2.0e-35 152.9 137 59.9
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 3.5e-35 152.1 128 61.7
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 4.5e-35 151.8 158 54.4
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 4.5e-35 151.8 142 57.0
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 5.9e-35 151.4 149 55.0
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 7.7e-35 151.0 128 60.2
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 1.0e-34 150.6 145 56.6
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 1.3e-34 150.2 109 71.6
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 1.3e-34 150.2 125 64.0
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 1.7e-34 149.8 131 60.3
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 2.2e-34 149.4 131 62.6
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 2.9e-34 149.1 126 58.7
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 3.8e-34 148.7 154 53.9
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 3.8e-34 148.7 131 61.1
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 6.5e-34 147.9 126 61.9
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 6.5e-34 147.9 149 54.4
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 1.1e-33 147.1 145 55.9
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 1.1e-33 147.1 157 51.6
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 1.5e-33 146.7 163 52.8
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.5e-33 146.7 142 53.5
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 1.5e-33 146.7 160 56.9
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 1.5e-33 146.7 126 57.9
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 1.9e-33 146.4 137 55.5
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 2.5e-33 146.0 155 54.2
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 2.5e-33 146.0 129 58.1
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 3.2e-33 145.6 145 56.6
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 3.2e-33 145.6 148 56.1
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 5.5e-33 144.8 141 55.3
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 5.5e-33 144.8 152 51.3
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 7.2e-33 144.4 155 54.2
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 9.4e-33 144.1 141 55.3
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 9.4e-33 144.1 152 52.0
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 9.4e-33 144.1 141 54.6
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 9.4e-33 144.1 141 54.6
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 9.4e-33 144.1 142 54.9
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 9.4e-33 144.1 149 53.0
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 1.2e-32 143.7 164 51.2
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 2.1e-32 142.9 125 57.6
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 4.7e-32 141.7 128 56.2
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 4.7e-32 141.7 128 56.2
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 6.1e-32 141.4 125 60.0
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 1.8e-31 139.8 147 52.4
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 2.3e-31 139.4 150 48.7
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 3.0e-31 139.0 133 57.1
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 4.0e-31 138.7 142 54.2
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 4.0e-31 138.7 149 50.3
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 5.2e-31 138.3 137 52.6
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 5.2e-31 138.3 157 49.7
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 1.5e-30 136.7 128 57.8
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 1.5e-30 136.7 158 52.5
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 2.0e-30 136.3 146 53.4
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 3.3e-30 135.6 138 53.6
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 7.5e-30 134.4 136 53.7
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 2.2e-29 132.9 163 47.9
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 1.4e-28 130.2 126 59.5
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 2.4e-28 129.4 172 45.3
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 5.3e-28 128.3 147 49.7
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 5.3e-28 128.3 148 50.0
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 1.6e-27 126.7 138 51.4
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 2.7e-27 125.9 218 41.3
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 5.9e-27 124.8 104 62.5
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 7.7e-27 124.4 146 49.3
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 7.2e-25 117.9 112 57.1
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 1.3e-21 107.1 76 69.7
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 8.3e-21 104.4 76 68.4
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 1.7e-18 96.7 98 51.0
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 2.3e-15 86.3 70 64.3
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 8.9e-15 84.3 158 37.3
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.2e-14 84.0 122 42.6
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.5e-14 83.6 137 39.4
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 6.3e-13 78.2 95 45.3
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 1.0e-10 70.9 67 52.2
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 2.0e-06 56.6 127 31.5


User provided reference genes

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