Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p19630 Brassica napus HOM05D006917 ORTHO05D008297 6.8e-193 677.2 344 100.0
BraA01t01896Z Brassica rapa HOM05D006917 ORTHO05D008297 5.6e-179 630.9 344 94.5
BcaNung01588 Brassica carinata HOM05D006917 ORTHO05D008297 1.2e-160 570.1 342 84.8
C01p24650 Brassica napus HOM05D006917 ORTHO05D008297 2.0e-160 569.3 325 90.2
Sp7g26170 Schrenkiella parvula HOM05D006917 ORTHO05D008297 1.0e-156 557.0 351 84.9
BolC7t46080H Brassica oleracea HOM05D006917 ORTHO05D008297 2.3e-156 555.8 349 84.2
BcaC09g50505 Brassica carinata HOM05D006917 ORTHO05D008297 3.6e-154 548.5 342 84.8
Thhalv10025608m.g Eutrema salsugineum HOM05D006917 ORTHO05D008297 2.4e-153 545.8 343 83.1
C07p56030 Brassica napus HOM05D006917 ORTHO05D008297 2.0e-152 542.7 351 82.9
BolC1t02415H Brassica oleracea HOM05D006917 ORTHO05D008297 1.7e-151 539.7 325 86.8
Carub.0007s1255 Capsella rubella HOM05D006917 ORTHO05D008297 1.7e-151 539.7 353 81.0
BraA03t14855Z Brassica rapa HOM05D006917 ORTHO05D008297 1.4e-150 536.6 352 81.8
AT4G28210 Arabidopsis thaliana HOM05D006917 ORTHO05D008297 2.7e-149 532.3 352 81.0
AL7G24390 Arabidopsis lyrata HOM05D006917 ORTHO05D008297 1.0e-148 530.4 341 82.1
A03p57910 Brassica napus HOM05D006917 ORTHO05D008297 5.6e-147 524.6 351 80.6
CARHR235920 Cardamine hirsuta HOM05D006917 ORTHO05D008297 1.8e-145 519.6 350 79.1
BcaC06g32638 Brassica carinata HOM05D006917 ORTHO05D008297 8.4e-143 510.8 351 80.1
Aa31LG2G22070 Aethionema arabicum HOM05D006917 ORTHO05D008297 2.1e-122 443.0 372 66.4
THA.LOC104825523 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 7.4e-115 417.9 286 74.5
THA.LOC104807893 Tarenaya hassleriana HOM05D006917 ORTHO05D008297 3.4e-112 409.1 279 74.2
Atru.chr6.3069 Acer truncatum HOM05D006917 ORTHO05D008297 2.5e-102 376.3 278 68.7
Manes.13G151300 Manihot esculenta HOM05D006917 ORTHO05D008297 1.2e-101 374.0 274 67.2
Haze_13090 Corylus avellana HOM05D006917 ORTHO05D008297 1.4e-100 370.5 323 61.0
Cfa014546 Carpinus fangiana HOM05D006917 ORTHO05D008297 1.8e-100 370.2 323 61.0
Eucgr.D00334 Eucalyptus grandis HOM05D006917 ORTHO05D008297 3.0e-100 369.4 267 68.9
CANSAT64G1157 Cannabis sativa HOM05D006917 ORTHO05D008297 3.9e-100 369.0 294 65.0
Ciclev10015637m.g Citrus clementina HOM05D006917 ORTHO05D008297 1.7e-98 363.6 270 67.8
CiPaw.03G170000 Carya illinoinensis HOM05D006917 ORTHO05D008297 2.2e-98 363.2 272 68.0
PGR042G0968 Punica granatum HOM05D006917 ORTHO05D008297 3.7e-98 362.5 277 65.0
COL.COLO4_13687 Corchorus olitorius HOM05D006917 ORTHO05D008297 2.4e-97 359.8 268 67.2
Hma1.2p1_0565F.1_g179500 Hydrangea macrophylla HOM05D006917 ORTHO05D008297 3.1e-97 359.4 287 61.0
Cpa.g.sc53.106 Carica papaya HOM05D006917 ORTHO05D008297 4.1e-97 359.0 287 64.8
Gorai.013G073800 Gossypium raimondii HOM05D006917 ORTHO05D008297 4.1e-97 359.0 268 66.0
MD09G1093800 Malus domestica HOM05D006917 ORTHO05D008297 4.1e-97 359.0 271 64.9
TWI36G0541 Tripterygium wilfordii HOM05D006917 ORTHO05D008297 4.1e-97 359.0 306 58.8
Gohir.A13G056900 Gossypium hirsutum HOM05D006917 ORTHO05D008297 7.0e-97 358.2 268 65.7
Prupe.3G231600 Prunus persica HOM05D006917 ORTHO05D008297 9.1e-97 357.8 286 63.6
RcHm_v2.0_Chr2g0161911 Rosa chinensis HOM05D006917 ORTHO05D008297 9.1e-97 357.8 286 65.4
Duzib132G0607 Durio zibethinus HOM05D006917 ORTHO05D008297 1.6e-96 357.1 268 64.9
Thecc.02G172300 Theobroma cacao HOM05D006917 ORTHO05D008297 3.5e-96 355.9 268 66.4
ClCG01G000980 Citrullus lanatus HOM05D006917 ORTHO05D008297 5.0e-95 352.1 345 55.1
Potri.013G146900 Populus trichocarpa HOM05D006917 ORTHO05D008297 1.1e-94 350.9 337 55.5
QL08p037351 Quercus lobata HOM05D006917 ORTHO05D008297 1.9e-94 350.1 358 56.1
Dinv15489 Davidia involucrata HOM05D006917 ORTHO05D008297 2.0e-91 340.1 289 60.2
Gohir.D13G065000 Gossypium hirsutum HOM05D006917 ORTHO05D008297 2.0e-91 340.1 256 64.5
Migut.M00331 Erythranthe guttata HOM05D006917 ORTHO05D008297 7.5e-91 338.2 274 59.9
Sed0009072 Sechium edule HOM05D006917 ORTHO05D008297 1.3e-90 337.4 269 63.2
Solyc10g008600.3 Solanum lycopersicum HOM05D006917 ORTHO05D008297 2.8e-90 336.3 278 59.7
PGSC0003DMG401021671 Solanum tuberosum HOM05D006917 ORTHO05D008297 3.7e-90 335.9 280 60.0
FvH4_6g44760 Fragaria vesca HOM05D006917 ORTHO05D008297 4.8e-90 335.5 286 61.5
CSS0047204 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 6.3e-90 335.1 361 51.0
Sopen10g004420 Solanum pennellii HOM05D006917 ORTHO05D008297 6.3e-90 335.1 280 59.6
FAN14G5902 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.1e-89 334.3 286 61.5
FAN02G4118 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.4e-89 334.0 286 61.9
CSS0012077 Camellia sinensis var. sinensis HOM05D006917 ORTHO05D008297 1.8e-89 333.6 361 51.0
MELO3C005833.2 Cucumis melo HOM05D006917 ORTHO05D008297 2.4e-89 333.2 343 52.8
FAN09G3443 Fragaria x ananassa HOM05D006917 ORTHO05D008297 3.1e-89 332.8 286 61.5
GSVIVG01030015001 Vitis vinifera HOM05D006917 ORTHO05D008297 7.0e-89 331.6 256 63.3
Sabra13G0118400 Salix brachista HOM05D006917 ORTHO05D008297 9.1e-89 331.3 337 54.3
FAN05G2664 Fragaria x ananassa HOM05D006917 ORTHO05D008297 1.6e-88 330.5 271 62.7
Peaxi162Scf00608g00317 Petunia axillaris HOM05D006917 ORTHO05D008297 2.7e-88 329.7 278 61.5
CsaV3_5G001130 Cucumis sativus L. HOM05D006917 ORTHO05D008297 5.9e-88 328.6 343 52.8
Lj3g0010136 Lotus japonicus HOM05D006917 ORTHO05D008297 1.7e-87 327.0 306 54.9
Cc05_g06310 Coffea canephora HOM05D006917 ORTHO05D008297 3.2e-86 322.8 255 61.2
VMungo1127G0570 Vigna mungo HOM05D006917 ORTHO05D008297 4.2e-86 322.4 270 61.5
Phvul.011G111800 Phaseolus vulgaris HOM05D006917 ORTHO05D008297 9.4e-86 321.2 308 54.9
Ca_20697_v3 Cicer arietinum L. HOM05D006917 ORTHO05D008297 2.1e-85 320.1 333 53.2
Lalb_Chr19g0135451 Lupinus albus HOM05D006917 ORTHO05D008297 3.6e-85 319.3 265 57.0
arahy.Tifrunner.gnm1.ann1.RY5XZD Arachis hypogaea HOM05D006917 ORTHO05D008297 4.7e-85 318.9 268 59.3
arahy.Tifrunner.gnm1.ann1.43ZBCD Arachis hypogaea HOM05D006917 ORTHO05D008297 6.1e-85 318.5 268 59.0
AUR62044684 Chenopodium quinoa HOM05D006917 ORTHO05D008297 1.8e-84 317.0 280 57.5
DCAR_009726 Daucus carota HOM05D006917 ORTHO05D008297 1.8e-84 317.0 276 59.1
MSTRG.18638 Avicennia marina HOM05D006917 ORTHO05D008297 5.2e-84 315.5 267 59.2
Ah.04g154320 Amaranthus hybridus HOM05D006917 ORTHO05D008297 8.8e-84 314.7 294 53.7
HanXRQChr06g0170991 Helianthus annuus HOM05D006917 ORTHO05D008297 8.8e-84 314.7 271 59.4
Lsat_1_v5_gn_3_39800 Lactuca sativa HOM05D006917 ORTHO05D008297 8.8e-84 314.7 279 57.0
Lalb_Chr03g0029201 Lupinus albus HOM05D006917 ORTHO05D008297 2.0e-83 313.5 332 51.2
Psat7g195960 Pisum sativum HOM05D006917 ORTHO05D008297 1.7e-82 310.5 349 51.3
SGA_v2.0_scaffold70G23465 Striga asiatica HOM05D006917 ORTHO05D008297 3.7e-82 309.3 343 49.6
ECA246G1823 Erigeron canadensis HOM05D006917 ORTHO05D008297 4.8e-82 308.9 266 59.4
Nn1g03886 Nelumbo nucifera HOM05D006917 ORTHO05D008297 1.1e-81 307.8 291 56.4
unitig_746.g26713 Utricularia gibba HOM05D006917 ORTHO05D008297 1.8e-81 307.0 280 55.0
EL10Ac9g22343 Beta vulgaris HOM05D006917 ORTHO05D008297 5.4e-81 305.4 271 56.8
SalBow7G0082 Salvia bowleyana HOM05D006917 ORTHO05D008297 5.4e-81 305.4 377 47.5
TPR.G21667 Trifolium pratense HOM05D006917 ORTHO05D008297 1.2e-80 304.3 269 57.2
AUR62037382 Chenopodium quinoa HOM05D006917 ORTHO05D008297 2.7e-80 303.1 271 57.2
Medtr4g046023 Medicago truncatula HOM05D006917 ORTHO05D008297 1.0e-79 301.2 268 57.8
PSO832G2257 Papaver somniferum HOM05D006917 ORTHO05D008297 1.0e-79 301.2 304 54.6
Actinidia30487 Actinidia chinensis HOM05D006917 ORTHO05D008297 2.9e-79 299.7 266 56.0
Glyma.06G298100 Glycine max HOM05D006917 ORTHO05D008297 2.9e-79 299.7 324 51.5
Glyma.12G107100 Glycine max HOM05D006917 ORTHO05D008297 1.1e-78 297.7 282 56.0
PSO210G6334 Papaver somniferum HOM05D006917 ORTHO05D008297 3.2e-78 296.2 304 53.0
MBI19_g29221_MAGBIO Magnolia biondii HOM05D006917 ORTHO05D008297 4.2e-78 295.8 263 56.3
Hund08056 Selenicereus undatus HOM05D006917 ORTHO05D008297 3.6e-77 292.7 278 54.0
Sc21g0002460 Simmondsia chinensis HOM05D006917 ORTHO05D008297 2.3e-76 290.0 299 51.2
Aqoxy3G03605 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 1.2e-75 287.7 280 53.9
HPP92_002192 Vanilla planifolia HOM05D006917 ORTHO05D008297 2.0e-75 287.0 319 50.2
CDE12G0159 Ceratophyllum demersum HOM05D006917 ORTHO05D008297 5.4e-73 278.9 289 48.4
Nitab4.5_0003195g0010 Nicotiana tabacum HOM05D006917 ORTHO05D008297 4.5e-72 275.8 231 58.9
Lj8P117T42 Lonicera japonica HOM05D006917 ORTHO05D008297 6.6e-71 271.9 234 56.8
Nitab4.5_0000635g0150 Nicotiana tabacum HOM05D006917 ORTHO05D008297 5.6e-70 268.9 274 51.8
PGSC0003DMG400029584 Solanum tuberosum HOM05D006917 ORTHO05D008297 1.6e-69 267.3 205 61.0
TAR629G2913 Trochodendron aralioides HOM05D006917 ORTHO05D008297 4.3e-62 242.7 293 47.4
ATR0693G234 Amborella trichopoda HOM05D006917 ORTHO05D008297 2.9e-58 229.9 231 52.8
MD17G1083500 Malus domestica HOM05D006917 ORTHO05D008297 6.2e-45 185.7 142 64.1
arahy.Tifrunner.gnm1.ann1.C6FW5S Arachis hypogaea HOM05D006917 ORTHO05D008297 4.4e-43 179.5 162 54.9
arahy.Tifrunner.gnm1.ann1.29DNDL Arachis hypogaea HOM05D006917 ORTHO05D008297 2.6e-35 153.7 136 56.6
SEGI_04255 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 3.3e-30 136.7 356 32.3
SEGI_37556 Sequoiadendron giganteum HOM05D006917 ORTHO05D008297 6.9e-20 102.4 203 36.0
AagrBONN_evm.TU.Sc2ySwM_228.5823 Anthoceros agrestis HOM05D006917 ORTHO05D008297 9.0e-20 102.1 279 28.3
MD17G1083600 Malus domestica HOM05D006917 ORTHO05D008297 8.4e-18 95.5 74 60.8
Pp3c2_31610 Physcomitrium patens HOM05D037891 ORTHO05D008297 1.3e-10 71.6 278 21.9
Aqoxy3G03603 Aquilegia oxysepala HOM05D006917 ORTHO05D008297 6.0e-08 62.8 93 45.2
Cpa.g.sc609.4 Carica papaya HOM05D006917 ORTHO05D008297 7.9e-08 62.4 62 54.8
Oeu039864.1 Olea europaea HOM05D006917 ORTHO05D008297 1.5e-06 58.2 54 51.9
Mapoly0028s0045 Marchantia polymorpha HOM05D037891 ORTHO05D008297 5.7e-06 56.2 262 23.3


User provided reference genes

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