Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p18920 Brassica napus HOM05D005039 ORTHO05D006145 3.1e-257 891.3 469 100.0
C01p23870 Brassica napus HOM05D005039 ORTHO05D006145 6.9e-257 890.2 469 99.8
BcaC09g50566 Brassica carinata HOM05D005039 ORTHO05D006145 3.4e-256 887.9 469 99.6
BolC1t02332H Brassica oleracea HOM05D005039 ORTHO05D006145 3.4e-256 887.9 469 99.6
BcaNung01651 Brassica carinata HOM05D005039 ORTHO05D006145 5.5e-254 880.6 469 98.1
BraA01t01833Z Brassica rapa HOM05D005039 ORTHO05D006145 6.7e-252 873.6 497 94.2
Thhalv10025115m.g Eutrema salsugineum HOM05D005039 ORTHO05D006145 1.1e-251 872.8 469 97.4
CARHR235330 Cardamine hirsuta HOM05D005039 ORTHO05D006145 4.8e-250 867.5 469 97.0
Carub.0007s1322 Capsella rubella HOM05D005039 ORTHO05D006145 8.2e-250 866.7 469 97.2
Sp7g25580 Schrenkiella parvula HOM05D005039 ORTHO05D006145 8.2e-250 866.7 469 96.6
AT4G27630 Arabidopsis thaliana HOM05D005039 ORTHO05D006145 5.9e-248 860.5 469 96.4
Aa31LG2G2190 Aethionema arabicum HOM05D005039 ORTHO05D006145 3.6e-237 824.7 469 91.9
THA.LOC104805716 Tarenaya hassleriana HOM05D005039 ORTHO05D006145 1.4e-236 822.8 469 91.5
CARHR056390 Cardamine hirsuta HOM05D005039 ORTHO05D006145 4.0e-236 821.2 469 90.8
AL2G19600 Arabidopsis lyrata HOM05D005039 ORTHO05D006145 9.7e-235 816.6 469 90.2
Sp5g19320 Schrenkiella parvula HOM05D005039 ORTHO05D006145 1.7e-234 815.8 469 90.8
Carub.0002s1015 Capsella rubella HOM05D005039 ORTHO05D006145 6.3e-234 813.9 469 90.2
AT1G64990 Arabidopsis thaliana HOM05D005039 ORTHO05D006145 7.0e-233 810.4 469 89.8
C02p21070 Brassica napus HOM05D005039 ORTHO05D006145 2.0e-232 808.9 470 90.6
BraA02t06350Z Brassica rapa HOM05D005039 ORTHO05D006145 2.0e-232 808.9 470 90.6
A02p12960 Brassica napus HOM05D005039 ORTHO05D006145 1.1e-230 803.1 471 90.2
BolC2t08248H Brassica oleracea HOM05D005039 ORTHO05D006145 9.4e-230 800.0 493 86.4
Duzib106G2059 Durio zibethinus HOM05D005039 ORTHO05D006145 4.4e-227 791.2 469 87.0
Manes.08G160900 Manihot esculenta HOM05D005039 ORTHO05D006145 1.4e-225 786.2 469 86.1
Aqoxy1G03063 Aquilegia oxysepala HOM05D005039 ORTHO05D006145 3.1e-225 785.0 468 86.1
Dinv29126 Davidia involucrata HOM05D005039 ORTHO05D006145 3.1e-225 785.0 469 86.1
Nn3g19238 Nelumbo nucifera HOM05D005039 ORTHO05D006145 3.1e-225 785.0 469 85.3
Gohir.A02G125900 Gossypium hirsutum HOM05D005039 ORTHO05D006145 2.0e-224 782.3 469 85.3
Gohir.D03G054700 Gossypium hirsutum HOM05D005039 ORTHO05D006145 2.0e-224 782.3 469 85.3
Thecc.05G222600 Theobroma cacao HOM05D005039 ORTHO05D006145 2.0e-224 782.3 469 85.7
Gorai.003G057600 Gossypium raimondii HOM05D005039 ORTHO05D006145 4.5e-224 781.2 469 85.1
MELO3C021899.2 Cucumis melo HOM05D005039 ORTHO05D006145 2.3e-223 778.9 469 85.5
TWI79G0887 Tripterygium wilfordii HOM05D005039 ORTHO05D006145 1.5e-222 776.2 469 85.3
Cfa016075 Carpinus fangiana HOM05D005039 ORTHO05D006145 2.5e-222 775.4 469 85.3
Sed0001134 Sechium edule HOM05D005039 ORTHO05D006145 3.3e-222 775.0 469 84.4
CSS0008859 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 5.5e-222 774.2 471 85.8
CsaV3_2G014060 Cucumis sativus L. HOM05D005039 ORTHO05D006145 5.5e-222 774.2 469 85.7
TAR629G1612 Trochodendron aralioides HOM05D005039 ORTHO05D006145 9.5e-222 773.5 469 84.9
FAN10G2688 Fragaria x ananassa HOM05D005039 ORTHO05D006145 1.2e-221 773.1 469 85.3
HanXRQChr16g0512151 Helianthus annuus HOM05D005039 ORTHO05D006145 1.2e-221 773.1 469 84.9
MD07G1310900 Malus domestica HOM05D005039 ORTHO05D006145 1.2e-221 773.1 469 85.7
Potri.013G077700 Populus trichocarpa HOM05D005039 ORTHO05D006145 1.6e-221 772.7 470 84.9
Ca_26497_v3 Cicer arietinum L. HOM05D005039 ORTHO05D006145 2.1e-221 772.3 469 85.1
CANSAT21G2526 Cannabis sativa HOM05D005039 ORTHO05D006145 2.8e-221 771.9 469 84.4
RcHm_v2.0_Chr1g0384591 Rosa chinensis HOM05D005039 ORTHO05D006145 2.8e-221 771.9 469 85.7
FvH4_7g34230 Fragaria vesca HOM05D005039 ORTHO05D006145 6.1e-221 770.8 469 84.9
Atru.chr12.1876 Acer truncatum HOM05D005039 ORTHO05D006145 1.8e-220 769.2 469 83.6
GSVIVG01024328001 Vitis vinifera HOM05D005039 ORTHO05D006145 3.0e-220 768.5 469 84.9
Ciclev10031435m.g Citrus clementina HOM05D005039 ORTHO05D006145 4.0e-220 768.1 469 85.1
FAN01G1789 Fragaria x ananassa HOM05D005039 ORTHO05D006145 1.5e-219 766.1 469 84.2
Glyma.11G109900 Glycine max HOM05D005039 ORTHO05D006145 1.5e-219 766.1 469 83.6
Nn1g02122 Nelumbo nucifera HOM05D005039 ORTHO05D006145 2.0e-219 765.8 469 83.8
Lsat_1_v5_gn_9_47921 Lactuca sativa HOM05D005039 ORTHO05D006145 9.8e-219 763.5 469 84.2
Glyma.12G014800 Glycine max HOM05D005039 ORTHO05D006145 1.7e-218 762.7 469 83.4
SGA_v2.0_scaffold188G40301 Striga asiatica HOM05D005039 ORTHO05D006145 1.7e-218 762.7 469 83.2
Lalb_Chr09g0320081 Lupinus albus HOM05D005039 ORTHO05D006145 2.2e-218 762.3 468 83.3
Medtr5g005440 Medicago truncatula HOM05D005039 ORTHO05D006145 3.7e-218 761.5 468 83.8
FAN03G0337 Fragaria x ananassa HOM05D005039 ORTHO05D006145 4.9e-218 761.1 471 84.3
Phvul.011G017800 Phaseolus vulgaris HOM05D005039 ORTHO05D006145 8.3e-218 760.4 469 83.4
Lj3g0003232 Lotus japonicus HOM05D005039 ORTHO05D006145 2.4e-217 758.8 468 84.0
SalBow7G2894 Salvia bowleyana HOM05D005039 ORTHO05D006145 2.4e-217 758.8 469 81.9
Solyc07g045330.3 Solanum lycopersicum HOM05D005039 ORTHO05D006145 5.4e-217 757.7 470 83.4
MBI04_g12218_MAGBIO Magnolia biondii HOM05D005039 ORTHO05D006145 7.0e-217 757.3 470 83.2
QL09p020758 Quercus lobata HOM05D005039 ORTHO05D006145 7.0e-217 757.3 468 84.2
PSO782G0889 Papaver somniferum HOM05D005039 ORTHO05D006145 9.2e-217 756.9 470 82.8
ATR0829G179 Amborella trichopoda HOM05D005039 ORTHO05D006145 1.2e-216 756.5 469 82.9
Sopen07g023860 Solanum pennellii HOM05D005039 ORTHO05D006145 1.2e-216 756.5 470 83.2
Migut.C00159 Erythranthe guttata HOM05D005039 ORTHO05D006145 1.3e-215 753.1 469 82.5
Sabra13G0066500 Salix brachista HOM05D005039 ORTHO05D006145 1.3e-215 753.1 506 78.9
PSO063G4466 Papaver somniferum HOM05D005039 ORTHO05D006145 1.7e-215 752.7 470 82.3
MSTRG.24939 Avicennia marina HOM05D005039 ORTHO05D006145 2.9e-215 751.9 469 81.7
ECA232G0266 Erigeron canadensis HOM05D005039 ORTHO05D006145 3.3e-214 748.4 463 83.6
CAN.G437.12 Capsicum annuum HOM05D005039 ORTHO05D006145 4.3e-214 748.0 470 82.3
Ah.13g072370 Amaranthus hybridus HOM05D005039 ORTHO05D006145 1.2e-213 746.5 469 83.2
Hund09811 Selenicereus undatus HOM05D005039 ORTHO05D006145 2.8e-213 745.3 493 79.5
vmacro06372 Vaccinium macrocarpon HOM05D005039 ORTHO05D006145 3.6e-213 745.0 506 78.3
Duzib128G1855 Durio zibethinus HOM05D005039 ORTHO05D006145 2.0e-211 739.2 469 81.9
EL10Ac3g05043 Beta vulgaris HOM05D005039 ORTHO05D006145 4.1e-209 731.5 545 73.0
Eucgr.K00067 Eucalyptus grandis HOM05D005039 ORTHO05D006145 6.6e-207 724.2 452 83.4
AUR62002093 Chenopodium quinoa HOM05D005039 ORTHO05D006145 3.6e-205 718.4 469 80.0
Os04g0600800 Oryza sativa ssp. japonica HOM05D005039 ORTHO05D006145 2.3e-204 715.7 469 78.7
Zm00001eb430290 Zea mays HOM05D005039 ORTHO05D006145 3.1e-204 715.3 469 78.5
Peaxi162Scf00802g00029 Petunia axillaris HOM05D005039 ORTHO05D006145 1.7e-202 709.5 470 79.6
PGR142G1194 Punica granatum HOM05D005039 ORTHO05D006145 3.9e-199 698.4 441 81.9
Nitab4.5_0006992g0040 Nicotiana tabacum HOM05D005039 ORTHO05D006145 8.6e-199 697.2 491 76.2
Nitab4.5_0009864g0010 Nicotiana tabacum HOM05D005039 ORTHO05D006145 3.6e-197 691.8 470 78.3
Oeu027894.4 Olea europaea HOM05D005039 ORTHO05D006145 5.8e-195 684.5 492 74.2
Sc13g0011000 Simmondsia chinensis HOM05D005039 ORTHO05D006145 7.1e-193 677.6 418 84.4
arahy.Tifrunner.gnm1.ann1.GG16T8 Arachis hypogaea HOM05D005039 ORTHO05D006145 1.1e-190 670.2 418 82.8
arahy.Tifrunner.gnm1.ann1.IZT0PT Arachis hypogaea HOM05D005039 ORTHO05D006145 1.1e-190 670.2 418 82.8
ClCG09G017310 Citrullus lanatus HOM05D005039 ORTHO05D006145 4.0e-188 661.8 397 86.4
Mapoly0094s0006 Marchantia polymorpha HOM05D005039 ORTHO05D006145 4.9e-186 654.8 469 71.4
Actinidia08765 Actinidia chinensis HOM05D005039 ORTHO05D006145 9.2e-185 650.6 425 80.9
Rhsim03G0224300 Rhododendron simsii HOM05D005039 ORTHO05D006145 6.0e-184 647.9 468 75.6
unitig_0.g2070 Utricularia gibba HOM05D005039 ORTHO05D006145 2.1e-181 639.4 461 75.1
AUR62028211 Chenopodium quinoa HOM05D005039 ORTHO05D006145 4.9e-178 628.2 417 78.7
DCAR_020429 Daucus carota HOM05D005039 ORTHO05D006145 6.4e-178 627.9 383 85.1
CSS0032758 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 6.0e-176 621.3 469 71.6
SMO304G0068 Selaginella moellendorffii HOM05D005039 ORTHO05D006145 9.6e-166 587.4 465 65.8
Prupe.2G329100 Prunus persica HOM05D005039 ORTHO05D006145 1.6e-160 570.1 340 88.5
CiPaw.05G212800 Carya illinoinensis HOM05D005039 ORTHO05D006145 8.7e-159 564.3 350 81.1
VMungo1127G0275 Vigna mungo HOM05D005039 ORTHO05D006145 3.3e-158 562.4 374 77.3
HPP92_014410 Vanilla planifolia HOM05D005039 ORTHO05D006145 1.3e-157 560.5 469 66.1
Cc02_g00100 Coffea canephora HOM05D005039 ORTHO05D006145 1.6e-157 560.1 373 77.7
Psat7g155320 Pisum sativum HOM05D005039 ORTHO05D006145 2.4e-156 556.2 365 79.7
CBR_g72647 Chara braunii HOM05D005039 ORTHO05D006145 5.8e-155 551.6 470 58.9
BcaB05g25317 Brassica carinata HOM05D005039 ORTHO05D006145 3.0e-151 539.3 312 88.8
Lj3A884T54 Lonicera japonica HOM05D005039 ORTHO05D006145 2.0e-147 526.6 324 85.5
Actinidia34332 Actinidia chinensis HOM05D005039 ORTHO05D006145 5.5e-129 465.3 308 80.8
CDE11G0732 Ceratophyllum demersum HOM05D005039 ORTHO05D006145 9.7e-126 454.5 324 75.3
MD01G1239200 Malus domestica HOM05D005039 ORTHO05D006145 8.5e-122 441.4 365 65.8
PGSC0003DMG401017405 Solanum tuberosum HOM05D005039 ORTHO05D006145 1.7e-109 400.6 246 85.4
COL.COLO4_15139 Corchorus olitorius HOM05D005039 ORTHO05D006145 4.0e-87 326.2 312 59.9
Haze_00371 Corylus avellana HOM05D005039 ORTHO05D006145 1.1e-79 301.6 238 68.5
PGSC0003DMG402017405 Solanum tuberosum HOM05D005039 ORTHO05D006145 2.0e-78 297.4 182 78.6
AagrBONN_evm.TU.Sc2ySwM_369.165 Anthoceros agrestis HOM05D005039 ORTHO05D006145 7.6e-78 295.4 302 54.0
Cre16.g674739 Chlamydomonas reinhardtii HOM05D005039 ORTHO05D006145 1.3e-77 294.7 505 37.2
Actinidia24520 Actinidia chinensis HOM05D005039 ORTHO05D006145 2.9e-77 293.5 173 83.2
BcaC03g14670 Brassica carinata HOM05D005039 ORTHO05D006145 4.6e-75 286.2 160 95.6
AagrBONN_evm.TU.Sc2ySwM_117.727 Anthoceros agrestis HOM05D005039 ORTHO05D006145 5.2e-71 272.7 217 59.0
AagrBONN_evm.TU.Sc2ySwM_369.410 Anthoceros agrestis HOM05D005039 ORTHO05D006145 1.4e-68 264.6 294 52.7
CARHR057320 Cardamine hirsuta HOM05D005039 ORTHO05D006145 7.3e-65 252.3 407 44.0
BcaB05g24073 Brassica carinata HOM05D005039 ORTHO05D006145 3.6e-64 250.0 140 95.7
EL10Ac3g05835 Beta vulgaris HOM05D005039 ORTHO05D006145 6.9e-55 219.2 195 65.6
Cc02_g00110 Coffea canephora HOM05D005039 ORTHO05D006145 6.4e-53 212.6 119 94.1
MCO06G137 Micromonas commoda HOM05D005039 ORTHO05D006145 3.3e-49 200.3 319 38.2
PRCOL_00000150 Prasinoderma coloniale HOM05D005039 ORTHO05D006145 3.7e-48 196.8 491 32.4
CDE11G0023 Ceratophyllum demersum HOM05D005039 ORTHO05D006145 1.9e-44 184.5 107 83.2
SEGI_29432 Sequoiadendron giganteum HOM05D005039 ORTHO05D006145 7.1e-44 182.6 111 87.4
SEGI_13634 Sequoiadendron giganteum HOM05D005039 ORTHO05D006145 5.7e-41 172.9 104 80.8
Cpa.g.sc43.133 Carica papaya HOM05D005039 ORTHO05D006145 3.1e-39 167.2 111 79.3
CSS0027952 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 3.8e-37 160.2 91 90.1
CSS0015728 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 3.8e-29 133.7 83 77.1
Carub.0008s0531 Capsella rubella HOM05D005039 ORTHO05D006145 1.2e-27 128.6 79 86.1
Cpa.g.sc43.136 Carica papaya HOM05D005039 ORTHO05D006145 3.6e-27 127.1 72 86.1
COL.COLO4_15138 Corchorus olitorius HOM05D005039 ORTHO05D006145 3.6e-27 127.1 72 88.9
Cpa.g.sc43.132 Carica papaya HOM05D005039 ORTHO05D006145 1.8e-26 124.8 74 81.1
ClCG09G017320 Citrullus lanatus HOM05D005039 ORTHO05D006145 5.1e-26 123.2 72 81.9
CSS0031224 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 1.1e-23 115.5 74 77.0
Oeu028985.2 Olea europaea HOM05D005039 ORTHO05D006145 1.2e-22 112.1 99 60.6
SHI14975 Sapria himalayana HOM05D000023 ORTHO05D000014 1.0e-21 109.0 79 72.2
SEGI_05893 Sequoiadendron giganteum HOM05D005039 ORTHO05D006145 4.2e-20 103.6 57 82.5
Solyc07g045270.2 Solanum lycopersicum HOM05D005039 ORTHO05D006145 2.1e-19 101.3 57 82.5
Carub.0008s0533 Capsella rubella HOM05D005039 ORTHO05D006145 1.4e-15 88.6 52 88.5
MD01G1239000 Malus domestica HOM05D005039 ORTHO05D006145 2.5e-12 77.8 46 91.3
Potri.019G042201 Populus trichocarpa HOM05D005039 ORTHO05D006145 3.2e-12 77.4 52 82.7
EL10Ac7g16242 Beta vulgaris HOM05D005039 ORTHO05D006145 5.5e-12 76.6 48 77.1
Zm00001eb027530 Zea mays HOM05D011105 ORTHO05D007705 7.2e-12 76.3 54 74.1
GSVIVG01028619001 Vitis vinifera HOM05D005039 ORTHO05D048867 1.7e-08 65.1 74 51.4


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