Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p18330 Brassica napus HOM05D007475 ORTHO05D009529 1.6e-95 352.8 183 100.0
BraA01t01783Z Brassica rapa HOM05D007475 ORTHO05D009529 1.6e-95 352.8 183 100.0
BraA01t01785Z Brassica rapa HOM05D007475 ORTHO05D009529 1.6e-95 352.8 183 100.0
BcaC09g50606 Brassica carinata HOM05D007475 ORTHO05D009529 8.5e-94 347.1 184 98.9
A01p18280 Brassica napus HOM05D007475 ORTHO05D009529 3.4e-90 335.1 184 94.0
A01p18340 Brassica napus HOM05D007475 ORTHO05D009529 1.3e-89 333.2 183 95.1
A01p18310 Brassica napus HOM05D007475 ORTHO05D009529 3.7e-89 331.6 183 92.9
BcaC09g49369 Brassica carinata HOM05D007475 ORTHO05D009529 8.3e-89 330.5 184 93.5
BcaC09g50609 Brassica carinata HOM05D007475 ORTHO05D009529 8.3e-89 330.5 184 93.5
C01p23280 Brassica napus HOM05D007475 ORTHO05D009529 8.3e-89 330.5 184 93.5
C01p37410 Brassica napus HOM05D007475 ORTHO05D009529 8.3e-89 330.5 184 93.5
BolC1t03708H Brassica oleracea HOM05D007475 ORTHO05D009529 8.3e-89 330.5 184 93.5
A01p18300 Brassica napus HOM05D007475 ORTHO05D009529 1.2e-87 326.6 184 91.8
C01p23300 Brassica napus HOM05D007475 ORTHO05D009529 1.2e-87 326.6 184 92.4
BolC1t02264H Brassica oleracea HOM05D007475 ORTHO05D009529 1.2e-87 326.6 184 90.8
BolC1t02266H Brassica oleracea HOM05D007475 ORTHO05D009529 3.5e-87 325.1 184 90.2
BraA01t01784Z Brassica rapa HOM05D007475 ORTHO05D009529 4.5e-87 324.7 184 91.3
A01p20870 Brassica napus HOM05D007475 ORTHO05D009529 1.3e-86 323.2 184 92.4
BraA01t01786Z Brassica rapa HOM05D007475 ORTHO05D009529 1.3e-86 323.2 184 90.8
BraA01t02006Z Brassica rapa HOM05D007475 ORTHO05D009529 1.3e-86 323.2 184 92.4
BcaC09g50364 Brassica carinata HOM05D007475 ORTHO05D009529 2.3e-86 322.4 184 92.4
BolC1t02261H Brassica oleracea HOM05D007475 ORTHO05D009529 8.6e-86 320.5 184 90.2
BolC1t02563H Brassica oleracea HOM05D007475 ORTHO05D009529 1.9e-85 319.3 184 91.8
C01p26200 Brassica napus HOM05D007475 ORTHO05D009529 7.2e-85 317.4 184 91.3
BcaNung03055 Brassica carinata HOM05D007475 ORTHO05D009529 1.0e-83 313.5 185 89.2
BcaNung00178 Brassica carinata HOM05D007475 ORTHO05D009529 2.3e-83 312.4 184 89.1
BcaNung00179 Brassica carinata HOM05D007475 ORTHO05D009529 2.3e-83 312.4 184 89.1
BraA01t01782Z Brassica rapa HOM05D007475 ORTHO05D009529 2.3e-83 312.4 209 80.4
BcaC09g50602 Brassica carinata HOM05D007475 ORTHO05D009529 1.2e-82 310.1 184 91.8
C01p23290 Brassica napus HOM05D007475 ORTHO05D009529 1.5e-82 309.7 184 86.4
BolC1t02262H Brassica oleracea HOM05D007475 ORTHO05D009529 1.5e-82 309.7 184 86.4
BcaB01g05180 Brassica carinata HOM05D007475 ORTHO05D009529 8.3e-81 303.9 186 89.2
C03p10150 Brassica napus HOM05D007475 ORTHO05D009529 8.3e-81 303.9 186 89.2
BolC3t13500H Brassica oleracea HOM05D007475 ORTHO05D009529 8.3e-81 303.9 186 89.2
BraA03t10193Z Brassica rapa HOM05D007475 ORTHO05D009529 8.3e-81 303.9 186 89.2
BcaNung03058 Brassica carinata HOM05D007475 ORTHO05D009529 1.7e-78 296.2 199 78.9
BcaNung03054 Brassica carinata HOM05D007475 ORTHO05D009529 9.5e-77 290.4 199 76.4
A03p08700 Brassica napus HOM05D007475 ORTHO05D009529 4.4e-66 255.0 140 92.9
A03p57110 Brassica napus HOM05D007475 ORTHO05D009529 3.3e-61 238.8 180 68.9
BcaB03g12530 Brassica carinata HOM05D007475 ORTHO05D009529 6.8e-59 231.1 186 66.7
Thhalv10026791m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 8.3e-57 224.2 186 65.6
BcaC07g38274 Brassica carinata HOM05D007475 ORTHO05D009529 1.2e-52 210.3 182 59.3
C08p10230 Brassica napus HOM05D007475 ORTHO05D009529 1.2e-52 210.3 182 59.3
BraA08t34007Z Brassica rapa HOM05D007475 ORTHO05D009529 2.8e-52 209.1 182 59.3
BcaC09g50612 Brassica carinata HOM05D007475 ORTHO05D009529 8.1e-52 207.6 116 93.1
A08p20510 Brassica napus HOM05D007475 ORTHO05D009529 9.9e-50 200.7 182 58.2
BcaC09g50610 Brassica carinata HOM05D007475 ORTHO05D009529 6.4e-49 198.0 116 88.8
Carub.0007s1368 Capsella rubella HOM05D007475 ORTHO05D009529 8.4e-49 197.6 185 59.5
AL7G25640 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 1.1e-48 197.2 179 62.0
AL7G25650 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 1.1e-48 197.2 179 61.5
AL7G25660 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 1.1e-48 197.2 183 59.0
AT4G27140 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 1.6e-47 193.4 174 61.5
BraA03t14781Z Brassica rapa HOM05D007475 ORTHO05D009529 2.1e-47 193.0 183 59.6
AT4G27150 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 5.1e-46 188.3 180 58.9
AT4G27170 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 1.9e-45 186.4 185 58.4
CARHR058020 Cardamine hirsuta HOM05D007475 ORTHO05D009529 3.3e-45 185.7 189 57.1
CARHR289420 Cardamine hirsuta HOM05D007475 ORTHO05D009529 1.6e-44 183.3 178 58.4
AT4G27160 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 1.1e-43 180.6 180 58.3
Carub.0007s1369 Capsella rubella HOM05D007475 ORTHO05D009529 1.1e-43 180.6 183 59.0
Carub.0007s1367 Capsella rubella HOM05D007475 ORTHO05D009529 9.0e-43 177.6 183 55.7
Carub.0007s1370 Capsella rubella HOM05D007475 ORTHO05D009529 1.1e-40 170.6 175 54.3
CARHR289410 Cardamine hirsuta HOM05D007475 ORTHO05D009529 7.1e-40 167.9 176 55.7
Carub.0008s0615 Capsella rubella HOM05D007475 ORTHO05D009529 2.1e-39 166.4 175 54.9
Aa31LG5G10270 Aethionema arabicum HOM05D007475 ORTHO05D009529 3.9e-38 162.2 184 50.5
Sp7g25120 Schrenkiella parvula HOM05D007475 ORTHO05D009529 5.1e-38 161.8 183 57.4
A03p57140 Brassica napus HOM05D007475 ORTHO05D009529 6.6e-38 161.4 175 54.3
C07p55330 Brassica napus HOM05D007475 ORTHO05D009529 1.9e-37 159.8 175 53.7
BolC7t46014H Brassica oleracea HOM05D007475 ORTHO05D009529 1.9e-37 159.8 175 53.7
CARHR234800 Cardamine hirsuta HOM05D007475 ORTHO05D009529 3.6e-36 155.6 134 66.4
Aa31LG5G10280 Aethionema arabicum HOM05D007475 ORTHO05D009529 4.0e-35 152.1 175 46.9
BcaC06g32708 Brassica carinata HOM05D007475 ORTHO05D009529 4.0e-35 152.1 174 52.9
AL8G30160 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 3.0e-30 136.0 176 47.7
AT5G54740 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 5.6e-29 131.7 176 46.6
Sp6g16690 Schrenkiella parvula HOM05D007475 ORTHO05D009529 1.6e-28 130.2 178 46.6
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.6e-28 130.2 176 44.3
Aa31LG3G10660 Aethionema arabicum HOM05D007475 ORTHO05D009529 6.2e-28 128.3 174 44.3
Thhalv10015934m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 2.4e-27 126.3 175 44.6
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.9e-25 119.4 174 42.5
THA.LOC104817656 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.8e-25 119.0 173 42.2
THA.LOC104822214 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.8e-25 119.0 173 42.2
THA.LOC104822215 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.8e-25 119.0 173 42.2
THA.LOC104799882 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 6.4e-25 118.2 174 40.2
THA.LOC104817654 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.9e-24 116.7 176 40.9
BcaNung00181 Brassica carinata HOM05D007475 ORTHO05D009529 9.3e-24 114.4 116 54.3
BcaC09g50613 Brassica carinata HOM05D007475 ORTHO05D009529 1.6e-23 113.6 62 93.5
THA.LOC104813415 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 7.9e-23 111.3 174 40.8
BcaC09g50611 Brassica carinata HOM05D007475 ORTHO05D009529 5.1e-22 108.6 62 90.3
THA.LOC104817655 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 7.4e-21 104.8 173 38.7
BcaB08g35832 Brassica carinata HOM05D007475 ORTHO05D009529 6.2e-20 101.7 137 48.9
Sp7g25110 Schrenkiella parvula HOM05D007475 ORTHO05D009529 6.5e-17 91.7 75 65.3
BolC8t48701H Brassica oleracea HOM05D007475 ORTHO05D009529 2.5e-16 89.7 100 48.0
Cpa.g.sc10.244 Carica papaya HOM05D007475 ORTHO05D009529 1.6e-15 87.0 173 33.5
THA.LOC104809798 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 4.6e-15 85.5 134 38.8
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 1.9e-13 80.1 171 33.3
Cpa.g.sc10.251 Carica papaya HOM05D007475 ORTHO05D009529 1.3e-12 77.4 173 30.6
Cpa.g.sc10.239 Carica papaya HOM05D007475 ORTHO05D009529 1.6e-12 77.0 173 30.6
Cpa.g.sc10.249 Carica papaya HOM05D007475 ORTHO05D009529 2.8e-12 76.3 173 30.1
Cpa.g.sc10.243 Carica papaya HOM05D007475 ORTHO05D009529 1.8e-11 73.6 173 35.3
Ciclev10009789m.g Citrus clementina HOM05D007475 ORTHO05D009529 3.1e-11 72.8 176 30.7
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 4.5e-10 68.9 170 28.8
Cpa.g.sc97.59 Carica papaya HOM05D007475 ORTHO05D009529 1.9e-08 63.5 172 31.4
Thecc.07G051300 Theobroma cacao HOM05D006536 ORTHO05D005877 3.6e-07 59.3 162 30.9
Sopen08g028810 Solanum pennellii HOM05D006536 ORTHO05D005877 7.9e-07 58.2 139 30.9
HanXRQChr11g0332911 Helianthus annuus HOM05D009374 ORTHO05D012864 1.0e-06 57.8 161 31.7
Peaxi162Scf00714g00425 Petunia axillaris HOM05D006536 ORTHO05D005877 1.4e-06 57.4 166 27.7
Manes.15G075900 Manihot esculenta HOM05D007475 ORTHO05D005877 1.8e-06 57.0 163 26.4
HanXRQChr11g0332931 Helianthus annuus HOM05D009374 ORTHO05D012864 5.1e-06 55.5 167 31.7


User provided reference genes

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