Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p18310 Brassica napus HOM05D007475 ORTHO05D009529 2.9e-94 348.6 180 100.0
A01p18300 Brassica napus HOM05D007475 ORTHO05D009529 9.3e-93 343.6 181 98.9
BraA01t01784Z Brassica rapa HOM05D007475 ORTHO05D009529 3.5e-92 341.7 181 98.3
BolC1t02261H Brassica oleracea HOM05D007475 ORTHO05D009529 3.3e-90 335.1 181 96.1
A01p18280 Brassica napus HOM05D007475 ORTHO05D009529 1.3e-89 333.2 181 93.4
A01p18330 Brassica napus HOM05D007475 ORTHO05D009529 1.1e-88 330.1 183 92.9
BolC1t02264H Brassica oleracea HOM05D007475 ORTHO05D009529 1.1e-88 330.1 184 93.5
BraA01t01783Z Brassica rapa HOM05D007475 ORTHO05D009529 1.1e-88 330.1 183 92.9
BraA01t01785Z Brassica rapa HOM05D007475 ORTHO05D009529 1.1e-88 330.1 183 92.9
BraA01t01782Z Brassica rapa HOM05D007475 ORTHO05D009529 1.8e-88 329.3 206 86.4
BolC1t02266H Brassica oleracea HOM05D007475 ORTHO05D009529 3.1e-88 328.6 184 92.9
BcaC09g49369 Brassica carinata HOM05D007475 ORTHO05D009529 1.5e-87 326.2 181 91.7
BcaC09g50609 Brassica carinata HOM05D007475 ORTHO05D009529 1.5e-87 326.2 181 91.7
C01p23280 Brassica napus HOM05D007475 ORTHO05D009529 1.5e-87 326.2 181 91.7
C01p37410 Brassica napus HOM05D007475 ORTHO05D009529 1.5e-87 326.2 181 91.7
BolC1t03708H Brassica oleracea HOM05D007475 ORTHO05D009529 1.5e-87 326.2 181 91.7
A01p18340 Brassica napus HOM05D007475 ORTHO05D009529 2.6e-87 325.5 182 92.3
A01p20870 Brassica napus HOM05D007475 ORTHO05D009529 2.6e-87 325.5 181 94.5
BraA01t02006Z Brassica rapa HOM05D007475 ORTHO05D009529 2.6e-87 325.5 181 94.5
C01p23300 Brassica napus HOM05D007475 ORTHO05D009529 4.5e-87 324.7 184 93.5
BcaC09g50606 Brassica carinata HOM05D007475 ORTHO05D009529 5.8e-87 324.3 184 91.8
BcaC09g50364 Brassica carinata HOM05D007475 ORTHO05D009529 1.7e-86 322.8 181 92.8
BolC1t02563H Brassica oleracea HOM05D007475 ORTHO05D009529 1.4e-85 319.7 181 92.3
C01p26200 Brassica napus HOM05D007475 ORTHO05D009529 5.5e-85 317.8 181 91.7
BcaNung00178 Brassica carinata HOM05D007475 ORTHO05D009529 1.3e-83 313.2 181 90.1
BcaNung00179 Brassica carinata HOM05D007475 ORTHO05D009529 1.3e-83 313.2 181 90.1
BraA01t01786Z Brassica rapa HOM05D007475 ORTHO05D009529 1.3e-83 313.2 181 87.8
C01p23290 Brassica napus HOM05D007475 ORTHO05D009529 9.6e-82 307.0 181 86.2
BolC1t02262H Brassica oleracea HOM05D007475 ORTHO05D009529 9.6e-82 307.0 181 86.2
BcaNung03055 Brassica carinata HOM05D007475 ORTHO05D009529 6.9e-80 300.8 184 84.2
BcaC09g50602 Brassica carinata HOM05D007475 ORTHO05D009529 1.2e-79 300.1 183 88.0
BcaB01g05180 Brassica carinata HOM05D007475 ORTHO05D009529 2.6e-79 298.9 185 88.1
C03p10150 Brassica napus HOM05D007475 ORTHO05D009529 2.6e-79 298.9 185 88.1
BolC3t13500H Brassica oleracea HOM05D007475 ORTHO05D009529 2.6e-79 298.9 185 88.1
BraA03t10193Z Brassica rapa HOM05D007475 ORTHO05D009529 2.6e-79 298.9 185 88.1
BcaNung03058 Brassica carinata HOM05D007475 ORTHO05D009529 6.5e-78 294.3 199 79.9
BcaNung03054 Brassica carinata HOM05D007475 ORTHO05D009529 8.4e-78 293.9 199 78.9
A03p08700 Brassica napus HOM05D007475 ORTHO05D009529 2.6e-63 245.7 134 93.3
A03p57110 Brassica napus HOM05D007475 ORTHO05D009529 6.1e-60 234.6 177 68.9
BcaB03g12530 Brassica carinata HOM05D007475 ORTHO05D009529 5.7e-58 228.0 181 66.9
Thhalv10026791m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 9.1e-56 220.7 183 66.1
BcaC09g50610 Brassica carinata HOM05D007475 ORTHO05D009529 2.5e-53 212.6 113 98.2
BcaC07g38274 Brassica carinata HOM05D007475 ORTHO05D009529 2.7e-52 209.1 179 60.9
C08p10230 Brassica napus HOM05D007475 ORTHO05D009529 2.7e-52 209.1 179 60.9
BraA08t34007Z Brassica rapa HOM05D007475 ORTHO05D009529 6.1e-52 208.0 179 60.9
BcaC09g50612 Brassica carinata HOM05D007475 ORTHO05D009529 6.7e-51 204.5 113 91.2
A08p20510 Brassica napus HOM05D007475 ORTHO05D009529 2.2e-49 199.5 179 59.8
Carub.0007s1368 Capsella rubella HOM05D007475 ORTHO05D009529 3.7e-49 198.7 182 59.9
AL7G25640 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 8.2e-49 197.6 176 61.9
AL7G25650 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 8.2e-49 197.6 176 61.4
AL7G25660 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 3.1e-48 195.7 180 61.1
BraA03t14781Z Brassica rapa HOM05D007475 ORTHO05D009529 2.6e-47 192.6 180 59.4
AT4G27140 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 3.5e-47 192.2 171 63.7
AT4G27150 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 3.8e-46 188.7 177 58.8
CARHR058020 Cardamine hirsuta HOM05D007475 ORTHO05D009529 5.0e-46 188.3 186 58.6
AT4G27170 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 4.2e-45 185.3 182 59.3
CARHR289420 Cardamine hirsuta HOM05D007475 ORTHO05D009529 9.4e-45 184.1 175 59.4
AT4G27160 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 8.0e-44 181.0 177 58.2
Carub.0007s1369 Capsella rubella HOM05D007475 ORTHO05D009529 1.0e-43 180.6 183 59.6
Carub.0007s1367 Capsella rubella HOM05D007475 ORTHO05D009529 2.0e-42 176.4 183 56.8
CARHR289410 Cardamine hirsuta HOM05D007475 ORTHO05D009529 4.8e-41 171.8 173 57.8
Carub.0007s1370 Capsella rubella HOM05D007475 ORTHO05D009529 2.4e-40 169.5 172 55.8
Carub.0008s0615 Capsella rubella HOM05D007475 ORTHO05D009529 3.5e-39 165.6 173 56.6
Aa31LG5G10270 Aethionema arabicum HOM05D007475 ORTHO05D009529 2.9e-38 162.5 181 50.8
Sp7g25120 Schrenkiella parvula HOM05D007475 ORTHO05D009529 5.0e-38 161.8 182 56.6
A03p57140 Brassica napus HOM05D007475 ORTHO05D009529 1.9e-37 159.8 172 53.5
C07p55330 Brassica napus HOM05D007475 ORTHO05D009529 5.5e-37 158.3 172 52.9
BolC7t46014H Brassica oleracea HOM05D007475 ORTHO05D009529 5.5e-37 158.3 172 52.9
CARHR234800 Cardamine hirsuta HOM05D007475 ORTHO05D009529 4.7e-36 155.2 134 66.4
Aa31LG5G10280 Aethionema arabicum HOM05D007475 ORTHO05D009529 2.3e-35 152.9 175 47.4
BcaC06g32708 Brassica carinata HOM05D007475 ORTHO05D009529 4.0e-35 152.1 174 52.9
AL8G30160 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 2.3e-30 136.3 173 48.6
AT5G54740 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 5.5e-29 131.7 173 47.4
Sp6g16690 Schrenkiella parvula HOM05D007475 ORTHO05D009529 7.2e-29 131.3 175 47.4
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.8e-28 129.4 171 43.9
Thhalv10015934m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 3.0e-27 125.9 172 44.8
Aa31LG3G10660 Aethionema arabicum HOM05D007475 ORTHO05D009529 5.2e-27 125.2 171 43.3
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.1e-24 117.5 171 40.9
THA.LOC104817656 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.1e-24 117.5 170 41.2
THA.LOC104822214 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.1e-24 117.5 170 41.2
THA.LOC104822215 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.1e-24 117.5 170 41.2
THA.LOC104799882 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.4e-24 117.1 171 40.4
THA.LOC104817654 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 9.2e-24 114.4 170 40.6
BcaNung00181 Brassica carinata HOM05D007475 ORTHO05D009529 1.2e-23 114.0 113 56.6
BcaC09g50613 Brassica carinata HOM05D007475 ORTHO05D009529 3.5e-23 112.5 62 91.9
BcaC09g50611 Brassica carinata HOM05D007475 ORTHO05D009529 2.3e-22 109.8 62 91.9
THA.LOC104813415 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.5e-21 107.1 170 37.6
THA.LOC104817655 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 6.1e-20 101.7 170 36.5
BcaB08g35832 Brassica carinata HOM05D007475 ORTHO05D009529 8.0e-20 101.3 132 48.5
Sp7g25110 Schrenkiella parvula HOM05D007475 ORTHO05D009529 1.8e-16 90.1 75 64.0
BolC8t48701H Brassica oleracea HOM05D007475 ORTHO05D009529 2.4e-16 89.7 97 50.5
THA.LOC104809798 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.3e-14 84.0 131 37.4
Cpa.g.sc10.244 Carica papaya HOM05D007475 ORTHO05D009529 6.6e-14 81.6 170 32.4
Cpa.g.sc10.251 Carica papaya HOM05D007475 ORTHO05D009529 3.3e-13 79.3 170 30.0
Cpa.g.sc10.239 Carica papaya HOM05D007475 ORTHO05D009529 4.3e-13 79.0 170 30.0
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 9.5e-13 77.8 168 32.1
Cpa.g.sc10.249 Carica papaya HOM05D007475 ORTHO05D009529 1.4e-11 73.9 170 30.0
Cpa.g.sc10.243 Carica papaya HOM05D007475 ORTHO05D009529 4.4e-10 68.9 170 30.6
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 3.7e-09 65.9 167 28.1
Ciclev10009789m.g Citrus clementina HOM05D007475 ORTHO05D009529 6.4e-09 65.1 172 30.2
Cpa.g.sc97.59 Carica papaya HOM05D007475 ORTHO05D009529 1.1e-08 64.3 169 32.5
Sopen08g028810 Solanum pennellii HOM05D006536 ORTHO05D005877 4.6e-07 58.9 136 31.6
Thecc.07G051300 Theobroma cacao HOM05D006536 ORTHO05D005877 6.0e-07 58.5 159 30.8
Peaxi162Scf00714g00425 Petunia axillaris HOM05D006536 ORTHO05D005877 3.0e-06 56.2 163 27.0


User provided reference genes

Program Settings