Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p18280 Brassica napus HOM05D007475 ORTHO05D009529 9.0e-96 353.6 181 100.0
BcaC09g49369 Brassica carinata HOM05D007475 ORTHO05D009529 1.9e-93 345.9 181 97.2
BcaC09g50609 Brassica carinata HOM05D007475 ORTHO05D009529 1.9e-93 345.9 181 97.2
C01p23280 Brassica napus HOM05D007475 ORTHO05D009529 1.9e-93 345.9 181 97.2
C01p37410 Brassica napus HOM05D007475 ORTHO05D009529 1.9e-93 345.9 181 97.2
BolC1t03708H Brassica oleracea HOM05D007475 ORTHO05D009529 1.9e-93 345.9 181 97.2
A01p18300 Brassica napus HOM05D007475 ORTHO05D009529 1.0e-91 340.1 181 94.5
BcaC09g50606 Brassica carinata HOM05D007475 ORTHO05D009529 2.3e-91 339.0 184 94.0
BraA01t01784Z Brassica rapa HOM05D007475 ORTHO05D009529 3.9e-91 338.2 181 93.9
A01p18330 Brassica napus HOM05D007475 ORTHO05D009529 1.3e-89 333.2 184 94.0
BraA01t01783Z Brassica rapa HOM05D007475 ORTHO05D009529 1.3e-89 333.2 184 94.0
BraA01t01785Z Brassica rapa HOM05D007475 ORTHO05D009529 1.3e-89 333.2 184 94.0
A01p18310 Brassica napus HOM05D007475 ORTHO05D009529 1.6e-89 332.8 181 93.4
A01p20870 Brassica napus HOM05D007475 ORTHO05D009529 2.8e-89 332.0 181 94.5
BraA01t02006Z Brassica rapa HOM05D007475 ORTHO05D009529 2.8e-89 332.0 181 94.5
BolC1t02261H Brassica oleracea HOM05D007475 ORTHO05D009529 3.7e-89 331.6 181 91.7
BcaC09g50364 Brassica carinata HOM05D007475 ORTHO05D009529 1.8e-88 329.3 181 93.4
C01p23300 Brassica napus HOM05D007475 ORTHO05D009529 2.4e-88 328.9 184 90.8
BolC1t02264H Brassica oleracea HOM05D007475 ORTHO05D009529 2.4e-88 328.9 184 90.8
A01p18340 Brassica napus HOM05D007475 ORTHO05D009529 3.1e-88 328.6 183 92.9
BraA01t01786Z Brassica rapa HOM05D007475 ORTHO05D009529 5.3e-88 327.8 181 91.7
BolC1t02266H Brassica oleracea HOM05D007475 ORTHO05D009529 6.9e-88 327.4 184 90.2
BraA01t01782Z Brassica rapa HOM05D007475 ORTHO05D009529 1.2e-87 326.6 206 83.5
BolC1t02563H Brassica oleracea HOM05D007475 ORTHO05D009529 1.5e-87 326.2 181 92.8
C01p26200 Brassica napus HOM05D007475 ORTHO05D009529 5.9e-87 324.3 181 92.3
BcaNung00178 Brassica carinata HOM05D007475 ORTHO05D009529 3.8e-86 321.6 181 91.2
BcaNung00179 Brassica carinata HOM05D007475 ORTHO05D009529 3.8e-86 321.6 181 91.2
C01p23290 Brassica napus HOM05D007475 ORTHO05D009529 2.5e-85 318.9 181 87.8
BolC1t02262H Brassica oleracea HOM05D007475 ORTHO05D009529 2.5e-85 318.9 181 87.8
BcaNung03055 Brassica carinata HOM05D007475 ORTHO05D009529 4.6e-84 314.7 184 88.0
BcaC09g50602 Brassica carinata HOM05D007475 ORTHO05D009529 6.1e-84 314.3 183 89.6
BcaB01g05180 Brassica carinata HOM05D007475 ORTHO05D009529 6.7e-83 310.8 185 88.1
C03p10150 Brassica napus HOM05D007475 ORTHO05D009529 6.7e-83 310.8 185 88.1
BolC3t13500H Brassica oleracea HOM05D007475 ORTHO05D009529 6.7e-83 310.8 185 88.1
BraA03t10193Z Brassica rapa HOM05D007475 ORTHO05D009529 6.7e-83 310.8 185 88.1
BcaNung03058 Brassica carinata HOM05D007475 ORTHO05D009529 7.7e-79 297.4 199 77.9
BcaNung03054 Brassica carinata HOM05D007475 ORTHO05D009529 8.5e-78 293.9 199 76.4
A03p08700 Brassica napus HOM05D007475 ORTHO05D009529 1.0e-67 260.4 139 92.8
A03p57110 Brassica napus HOM05D007475 ORTHO05D009529 1.8e-64 249.6 177 72.3
BcaB03g12530 Brassica carinata HOM05D007475 ORTHO05D009529 2.9e-62 242.3 181 69.1
Thhalv10026791m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 8.8e-59 230.7 184 69.6
BcaC09g50612 Brassica carinata HOM05D007475 ORTHO05D009529 1.3e-54 216.9 113 99.1
BcaC07g38274 Brassica carinata HOM05D007475 ORTHO05D009529 5.0e-54 214.9 180 61.7
C08p10230 Brassica napus HOM05D007475 ORTHO05D009529 5.0e-54 214.9 180 61.7
BraA08t34007Z Brassica rapa HOM05D007475 ORTHO05D009529 1.9e-53 213.0 180 61.7
AL7G25660 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 5.2e-51 204.9 180 62.2
A08p20510 Brassica napus HOM05D007475 ORTHO05D009529 8.8e-51 204.1 180 60.6
Carub.0007s1368 Capsella rubella HOM05D007475 ORTHO05D009529 8.8e-51 204.1 182 60.4
AL7G25640 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 1.2e-50 203.8 176 62.5
AL7G25650 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 1.2e-50 203.8 176 61.9
BcaC09g50610 Brassica carinata HOM05D007475 ORTHO05D009529 2.0e-50 203.0 113 91.2
AT4G27140 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 9.8e-50 200.7 171 63.7
BraA03t14781Z Brassica rapa HOM05D007475 ORTHO05D009529 2.8e-49 199.1 180 60.0
AT4G27170 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 3.1e-48 195.7 182 59.9
AT4G27150 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 5.4e-48 194.9 177 59.3
CARHR058020 Cardamine hirsuta HOM05D007475 ORTHO05D009529 1.6e-47 193.4 186 60.2
CARHR289420 Cardamine hirsuta HOM05D007475 ORTHO05D009529 5.9e-47 191.4 175 60.0
AT4G27160 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 1.1e-45 187.2 177 58.8
Carub.0007s1369 Capsella rubella HOM05D007475 ORTHO05D009529 3.3e-45 185.7 180 60.0
Carub.0007s1367 Capsella rubella HOM05D007475 ORTHO05D009529 6.1e-44 181.4 180 57.2
CARHR289410 Cardamine hirsuta HOM05D007475 ORTHO05D009529 3.0e-43 179.1 173 58.4
Carub.0007s1370 Capsella rubella HOM05D007475 ORTHO05D009529 4.0e-43 178.7 172 57.6
Carub.0008s0615 Capsella rubella HOM05D007475 ORTHO05D009529 2.2e-41 172.9 172 56.4
Aa31LG5G10270 Aethionema arabicum HOM05D007475 ORTHO05D009529 9.2e-40 167.5 181 51.9
A03p57140 Brassica napus HOM05D007475 ORTHO05D009529 2.7e-39 166.0 172 54.1
Sp7g25120 Schrenkiella parvula HOM05D007475 ORTHO05D009529 5.9e-39 164.9 182 56.0
C07p55330 Brassica napus HOM05D007475 ORTHO05D009529 7.8e-39 164.5 172 53.5
BolC7t46014H Brassica oleracea HOM05D007475 ORTHO05D009529 7.8e-39 164.5 172 53.5
CARHR234800 Cardamine hirsuta HOM05D007475 ORTHO05D009529 3.9e-38 162.2 134 67.2
Aa31LG5G10280 Aethionema arabicum HOM05D007475 ORTHO05D009529 3.3e-37 159.1 176 50.6
BcaC06g32708 Brassica carinata HOM05D007475 ORTHO05D009529 6.8e-35 151.4 172 52.3
AL8G30160 Arabidopsis lyrata HOM05D007475 ORTHO05D009529 6.0e-31 138.3 173 48.0
AT5G54740 Arabidopsis thaliana HOM05D007475 ORTHO05D009529 1.1e-29 134.0 173 46.8
Sp6g16690 Schrenkiella parvula HOM05D007475 ORTHO05D009529 1.1e-29 134.0 175 46.9
THA.LOC104822213 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 9.5e-29 131.0 172 45.3
Thhalv10015934m.g Eutrema salsugineum HOM05D007475 ORTHO05D009529 1.1e-27 127.5 172 45.3
Aa31LG3G10660 Aethionema arabicum HOM05D007475 ORTHO05D009529 5.2e-27 125.2 172 44.2
BcaC09g50613 Brassica carinata HOM05D007475 ORTHO05D009529 2.9e-25 119.4 62 93.5
THA.LOC104799881 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.9e-25 119.4 172 43.0
THA.LOC104817656 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.9e-25 119.4 171 42.7
THA.LOC104822214 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.9e-25 119.4 171 42.7
THA.LOC104822215 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.9e-25 119.4 171 42.7
THA.LOC104799882 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 3.7e-25 119.0 172 42.4
BcaC09g50611 Brassica carinata HOM05D007475 ORTHO05D009529 1.9e-24 116.7 62 93.5
THA.LOC104817654 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 2.4e-24 116.3 171 42.7
BcaNung00181 Brassica carinata HOM05D007475 ORTHO05D009529 4.1e-24 115.5 113 57.5
THA.LOC104813415 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 5.1e-22 108.6 171 39.2
BcaB08g35832 Brassica carinata HOM05D007475 ORTHO05D009529 5.6e-21 105.1 132 50.0
THA.LOC104817655 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.6e-20 103.6 171 38.6
Sp7g25110 Schrenkiella parvula HOM05D007475 ORTHO05D009529 4.4e-18 95.5 75 66.7
BolC8t48701H Brassica oleracea HOM05D007475 ORTHO05D009529 7.5e-18 94.7 97 52.6
THA.LOC104809798 Tarenaya hassleriana HOM05D007475 ORTHO05D009529 1.2e-15 87.4 131 38.9
Cpa.g.sc10.244 Carica papaya HOM05D007475 ORTHO05D009529 1.7e-14 83.6 171 33.9
Ciclev10009848m.g Citrus clementina HOM05D007475 ORTHO05D005877 7.3e-13 78.2 169 34.3
Cpa.g.sc10.239 Carica papaya HOM05D007475 ORTHO05D009529 2.8e-12 76.3 171 30.4
Cpa.g.sc10.251 Carica papaya HOM05D007475 ORTHO05D009529 2.8e-12 76.3 171 30.4
Cpa.g.sc10.249 Carica papaya HOM05D007475 ORTHO05D009529 4.0e-11 72.4 171 30.4
Cpa.g.sc10.243 Carica papaya HOM05D007475 ORTHO05D009529 8.9e-11 71.2 171 32.7
TWI39G0980 Tripterygium wilfordii HOM05D006536 ORTHO05D005877 2.0e-10 70.1 168 29.2
Cpa.g.sc97.59 Carica papaya HOM05D007475 ORTHO05D009529 9.9e-10 67.8 170 32.4
Ciclev10009789m.g Citrus clementina HOM05D007475 ORTHO05D009529 1.7e-09 67.0 172 29.1
Thecc.07G051300 Theobroma cacao HOM05D006536 ORTHO05D005877 9.3e-08 61.2 160 30.0
Manes.15G075900 Manihot esculenta HOM05D007475 ORTHO05D005877 1.3e-06 57.4 163 28.8
HanXRQChr11g0332911 Helianthus annuus HOM05D009374 ORTHO05D012864 3.0e-06 56.2 161 33.5
Sopen08g028810 Solanum pennellii HOM05D006536 ORTHO05D005877 5.1e-06 55.5 132 31.8
Peaxi162Scf00714g00425 Petunia axillaris HOM05D006536 ORTHO05D005877 8.7e-06 54.7 164 28.0


User provided reference genes

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