Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 2.9e-69 265.0 126 100.0
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 2.9e-69 265.0 126 100.0
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 6.1e-67 257.3 126 96.0
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 1.5e-57 226.1 131 85.5
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 2.6e-57 225.3 126 87.3
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 1.7e-53 212.6 126 82.5
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 1.7e-53 212.6 128 82.8
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 1.5e-52 209.5 123 79.7
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 3.3e-52 208.4 126 81.7
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 8.9e-50 200.3 124 80.6
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 2.0e-49 199.1 126 79.4
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 5.8e-49 197.6 126 77.8
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 3.7e-48 194.9 126 76.2
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 2.4e-47 192.2 126 75.4
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 1.2e-46 189.9 124 75.8
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 1.0e-45 186.8 124 75.0
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 4.3e-44 181.4 123 73.2
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 2.2e-40 169.1 91 86.8
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 3.0e-37 158.7 124 63.7
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 5.4e-31 137.9 122 56.6
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 3.0e-29 132.1 121 55.4
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 5.1e-29 131.3 122 53.3
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 8.6e-29 130.6 122 53.3
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 1.5e-28 129.8 122 51.6
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 1.5e-28 129.8 122 53.3
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 1.5e-28 129.8 125 53.6
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 3.3e-28 128.6 126 52.4
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 4.3e-28 128.3 122 52.5
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 9.6e-28 127.1 122 55.7
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 1.2e-27 126.7 122 53.3
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 2.1e-27 125.9 125 52.8
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 2.8e-27 125.6 122 52.5
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 4.7e-27 124.8 122 50.8
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 4.7e-27 124.8 122 51.6
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 4.7e-27 124.8 122 51.6
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 8.1e-27 124.0 123 51.2
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 8.1e-27 124.0 122 49.2
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 8.1e-27 124.0 122 52.5
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 8.1e-27 124.0 122 50.0
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 1.1e-26 123.6 122 50.0
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 1.8e-26 122.9 122 51.6
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 4.0e-26 121.7 111 54.1
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 4.0e-26 121.7 110 55.5
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 6.8e-26 120.9 115 51.3
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 6.8e-26 120.9 122 50.8
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 6.8e-26 120.9 119 50.4
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 6.8e-26 120.9 122 51.6
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 8.9e-26 120.6 122 52.5
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 8.9e-26 120.6 119 49.6
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 1.2e-25 120.2 118 49.2
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 1.2e-25 120.2 119 48.7
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 2.6e-25 119.0 123 51.2
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 2.6e-25 119.0 115 48.7
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 2.6e-25 119.0 119 48.7
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 3.4e-25 118.6 123 50.4
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 4.4e-25 118.2 115 50.4
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 5.8e-25 117.9 125 51.2
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 7.6e-25 117.5 121 51.2
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 7.6e-25 117.5 120 47.5
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 9.9e-25 117.1 117 50.4
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 1.3e-24 116.7 119 48.7
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 1.3e-24 116.7 124 49.2
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 1.3e-24 116.7 124 48.4
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 1.7e-24 116.3 124 49.2
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.2e-24 115.9 121 50.4
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 2.2e-24 115.9 121 50.4
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 3.8e-24 115.2 122 48.4
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 3.8e-24 115.2 119 48.7
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 4.9e-24 114.8 124 45.2
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 4.9e-24 114.8 122 47.5
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 4.9e-24 114.8 124 47.6
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 1.1e-23 113.6 114 47.4
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 1.4e-23 113.2 124 47.6
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.4e-23 113.2 121 49.6
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 1.9e-23 112.8 124 46.8
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 1.9e-23 112.8 124 47.6
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 2.4e-23 112.5 174 37.9
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 4.2e-23 111.7 121 48.8
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 5.4e-23 111.3 114 48.2
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 5.4e-23 111.3 121 49.6
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 5.4e-23 111.3 124 46.0
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 9.3e-23 110.5 121 48.8
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 1.6e-22 109.8 116 46.6
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 3.5e-22 108.6 121 47.9
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 4.6e-22 108.2 122 47.5
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 6.0e-22 107.8 122 46.7
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 7.8e-22 107.5 114 48.2
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 7.8e-22 107.5 142 43.0
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 1.3e-21 106.7 127 44.9
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 3.9e-21 105.1 117 46.2
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 8.7e-21 104.0 109 49.5
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.5e-20 103.2 121 46.3
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 1.5e-20 103.2 118 42.4
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 4.3e-20 101.7 80 60.0
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 7.3e-20 100.9 123 45.5
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 7.3e-20 100.9 77 62.3
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 7.3e-20 100.9 77 61.0
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 9.6e-20 100.5 112 43.8
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 1.3e-19 100.1 116 44.0
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.1e-18 97.1 108 45.4
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 1.4e-18 96.7 76 59.2
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 2.4e-18 95.9 107 46.7
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 2.4e-18 95.9 111 45.0
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 3.1e-18 95.5 83 57.8
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 3.1e-18 95.5 77 57.1
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 1.5e-17 93.2 81 53.1
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 4.4e-17 91.7 111 44.1
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.7e-16 89.7 78 52.6
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 2.2e-16 89.4 78 52.6
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 2.9e-16 89.0 77 54.5
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 6.4e-16 87.8 72 58.3
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 2.4e-15 85.9 78 51.3
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 5.4e-15 84.7 73 53.4
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 5.4e-15 84.7 95 48.4
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 5.4e-15 84.7 72 55.6
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 2.7e-14 82.4 92 48.9
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 7.9e-14 80.9 71 56.3
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 6.6e-13 77.8 76 51.3
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 8.7e-13 77.4 114 35.1
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 1.1e-12 77.0 87 44.8
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 4.3e-12 75.1 86 45.3
Manes.04G010000 Manihot esculenta HOM05D006227 ORTHO05D007714 7.1e-07 57.8 68 45.6
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 3.5e-06 55.5 40 60.0
Lsat_1_v5_gn_2_96480 Lactuca sativa HOM05D006227 ORTHO05D007714 6.0e-06 54.7 45 51.1


User provided reference genes

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