Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 9.0e-168 593.6 314 100.0
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 1.1e-165 586.6 314 98.7
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 2.4e-165 585.5 314 98.7
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 7.1e-165 583.9 314 98.4
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 7.1e-165 583.9 314 98.4
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 7.9e-164 580.5 314 97.5
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 1.0e-155 553.5 314 93.3
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 1.9e-154 549.3 314 92.0
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 1.9e-154 549.3 314 91.7
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 9.6e-154 547.0 314 92.0
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 1.3e-153 546.6 314 92.0
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 1.5e-151 539.7 314 91.1
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 5.8e-151 537.7 314 90.4
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 2.2e-150 535.8 314 90.4
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 3.8e-150 535.0 314 90.4
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 1.9e-149 532.7 314 90.4
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 7.7e-143 510.8 314 86.0
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 1.2e-124 450.3 325 72.9
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 2.7e-124 449.1 310 74.2
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 6.1e-124 448.0 324 73.5
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 2.0e-122 443.0 312 73.1
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 3.3e-122 442.2 308 73.7
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 7.5e-122 441.0 278 79.5
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 9.7e-122 440.7 312 72.8
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 1.3e-121 440.3 312 72.4
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 2.8e-121 439.1 278 79.1
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 4.8e-121 438.3 273 80.2
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 4.8e-121 438.3 273 80.6
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 1.6e-119 433.3 271 81.2
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.6e-119 433.3 271 81.2
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 3.5e-119 432.2 271 80.8
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 4.5e-119 431.8 273 78.0
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 4.5e-119 431.8 280 78.6
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 5.9e-119 431.4 268 78.7
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 7.7e-119 431.0 306 72.2
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 7.7e-119 431.0 283 78.8
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 1.7e-118 429.9 273 79.1
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 2.2e-118 429.5 270 80.0
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 2.2e-118 429.5 317 74.1
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 3.8e-118 428.7 272 79.4
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 6.5e-118 427.9 321 68.5
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 6.5e-118 427.9 285 74.7
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 1.1e-117 427.2 273 76.6
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 1.1e-117 427.2 283 77.0
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 1.5e-117 426.8 330 70.3
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 1.5e-117 426.8 283 76.0
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 1.5e-117 426.8 270 78.9
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 1.5e-117 426.8 277 76.9
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 1.9e-117 426.4 292 73.6
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 1.9e-117 426.4 298 73.5
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 3.2e-117 425.6 316 71.5
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 3.2e-117 425.6 283 76.7
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 4.2e-117 425.2 300 73.3
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 5.5e-117 424.9 272 77.6
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 7.2e-117 424.5 317 70.3
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 9.4e-117 424.1 283 76.7
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 1.2e-116 423.7 305 71.5
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 1.2e-116 423.7 299 72.2
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 1.2e-116 423.7 271 79.3
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 1.6e-116 423.3 297 72.4
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 2.1e-116 422.9 321 68.8
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 2.1e-116 422.9 279 77.1
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 2.7e-116 422.5 285 75.4
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 3.6e-116 422.2 288 75.0
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 4.7e-116 421.8 319 68.7
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 8.0e-116 421.0 305 71.1
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 8.0e-116 421.0 294 74.1
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 8.0e-116 421.0 280 76.4
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 1.4e-115 420.2 289 75.1
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 1.4e-115 420.2 286 74.8
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 6.8e-115 417.9 327 69.1
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 1.2e-114 417.2 297 72.1
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 1.2e-114 417.2 281 75.1
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 1.2e-114 417.2 281 75.1
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 1.2e-114 417.2 274 76.3
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 1.5e-114 416.8 284 73.9
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 3.4e-114 415.6 307 70.0
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 4.4e-114 415.2 284 73.9
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 9.8e-114 414.1 285 74.4
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 2.8e-113 412.5 293 73.0
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 8.3e-113 411.0 279 73.5
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 3.5e-111 405.6 316 68.0
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 7.2e-109 397.9 314 65.9
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 6.1e-108 394.8 231 81.8
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 6.1e-108 394.8 231 81.8
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 8.0e-108 394.4 283 72.4
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 8.0e-108 394.4 278 73.4
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 4.0e-107 392.1 300 67.7
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 1.5e-106 390.2 258 75.2
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 5.4e-104 381.7 285 70.9
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 1.0e-102 377.5 312 63.1
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 1.7e-102 376.7 304 66.4
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 5.6e-101 371.7 228 79.8
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 3.6e-100 369.0 235 75.3
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 1.8e-99 366.7 298 64.1
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 6.8e-99 364.8 307 63.5
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 1.5e-98 363.6 286 66.8
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 6.4e-97 358.2 231 77.1
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 2.4e-96 356.3 289 65.1
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 1.1e-93 347.4 298 61.7
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 5.6e-93 345.1 307 59.9
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 6.8e-91 338.2 277 63.2
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 1.2e-90 337.4 207 82.1
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 1.2e-90 337.4 260 64.6
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 1.5e-85 320.5 266 59.8
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 7.3e-85 318.2 246 65.0
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 2.3e-83 313.2 328 54.9
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 4.9e-73 278.9 274 54.0
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 6.6e-62 241.9 289 49.5
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 1.5e-61 240.7 223 62.8
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 5.3e-59 232.3 223 56.1
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 5.4e-56 222.2 230 56.1
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 2.1e-55 220.3 178 68.5
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 1.9e-48 197.2 143 72.0
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 5.5e-40 169.1 104 72.1
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 9.7e-21 105.1 69 69.6
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 1.3e-17 94.7 120 45.0
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 1.0e-09 68.6 64 64.1
Eucgr.G02044 Eucalyptus grandis HOM05D006891 ORTHO05D008671 3.8e-09 66.6 41 73.2
Ca_29372_v3 Cicer arietinum L. HOM05D004373 ORTHO05D005203 1.4e-06 58.2 125 30.4


User provided reference genes

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