Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p16220 Brassica napus HOM05D007115 ORTHO05D008923 2.1e-132 475.7 244 100.0
BraA01t01558Z Brassica rapa HOM05D007115 ORTHO05D008923 2.1e-132 475.7 244 100.0
BolC1t01950H Brassica oleracea HOM05D007115 ORTHO05D008923 2.1e-124 449.1 244 95.9
BcaNung06011 Brassica carinata HOM05D007115 ORTHO05D008923 4.1e-120 434.9 244 93.9
C01p20210 Brassica napus HOM05D007115 ORTHO05D008923 1.0e-118 430.3 247 91.9
Sp7g22910 Schrenkiella parvula HOM05D007115 ORTHO05D008923 7.4e-101 370.9 238 84.0
Thhalv10026135m.g Eutrema salsugineum HOM05D007115 ORTHO05D008923 4.9e-97 358.2 237 82.3
AL7G28270 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 3.5e-95 352.1 235 82.6
AT4G24930 Arabidopsis thaliana HOM05D007115 ORTHO05D008923 2.3e-94 349.4 234 81.6
Carub.0007s1613 Capsella rubella HOM05D007115 ORTHO05D008923 7.4e-93 344.4 234 80.8
CARHR232330 Cardamine hirsuta HOM05D007115 ORTHO05D008923 3.7e-92 342.0 233 80.7
THA.LOC104811583 Tarenaya hassleriana HOM05D007115 ORTHO05D008923 1.6e-79 300.1 238 69.7
Aa31LG7G10860 Aethionema arabicum HOM05D007115 ORTHO05D008923 6.1e-79 298.1 243 69.1
Cfa018785 Carpinus fangiana HOM05D007115 ORTHO05D008923 3.8e-65 252.3 233 60.9
Haze_07151 Corylus avellana HOM05D007115 ORTHO05D008923 1.4e-64 250.4 233 60.9
Hma1.2p1_0014F.1_g009320 Hydrangea macrophylla HOM05D007115 ORTHO05D008923 1.0e-62 244.2 227 60.8
Sabra15G0118300 Salix brachista HOM05D007115 ORTHO05D008923 1.4e-62 243.8 187 69.0
Aqoxy5G03328 Aquilegia oxysepala HOM05D007115 ORTHO05D008923 1.8e-62 243.4 223 58.7
Potri.015G097700 Populus trichocarpa HOM05D007115 ORTHO05D008923 3.0e-62 242.7 207 65.2
Actinidia25565 Actinidia chinensis HOM05D007115 ORTHO05D008923 3.9e-62 242.3 231 59.7
GSVIVG01008566001 Vitis vinifera HOM05D007115 ORTHO05D008923 3.9e-62 242.3 224 60.7
RcHm_v2.0_Chr7g0190021 Rosa chinensis HOM05D007115 ORTHO05D008923 5.2e-62 241.9 230 57.8
CiPaw.12G043900 Carya illinoinensis HOM05D007115 ORTHO05D008923 1.5e-61 240.4 233 60.1
Phvul.009G165800 Phaseolus vulgaris HOM05D007115 ORTHO05D008923 2.6e-61 239.6 190 64.7
Atru.chr6.1807 Acer truncatum HOM05D007115 ORTHO05D008923 3.3e-61 239.2 187 67.4
Cpa.g.sc13.101 Carica papaya HOM05D007115 ORTHO05D008923 3.3e-61 239.2 228 59.2
ATR0790G002 Amborella trichopoda HOM05D007115 ORTHO05D008923 5.7e-61 238.4 195 64.6
Prupe.5G150000 Prunus persica HOM05D007115 ORTHO05D008923 5.7e-61 238.4 220 60.0
ClCG03G003830 Citrullus lanatus HOM05D007115 ORTHO05D008923 1.7e-60 236.9 201 64.7
Glyma.06G169300 Glycine max HOM05D007115 ORTHO05D008923 1.7e-60 236.9 191 64.9
Manes.14G050500 Manihot esculenta HOM05D007115 ORTHO05D008923 3.7e-60 235.7 187 66.8
FvH4_5g08420 Fragaria vesca HOM05D007115 ORTHO05D008923 6.3e-60 235.0 230 55.2
Lj1g0010129 Lotus japonicus HOM05D007115 ORTHO05D008923 6.3e-60 235.0 189 63.5
FAN04G1902 Fragaria x ananassa HOM05D007115 ORTHO05D008923 8.2e-60 234.6 226 56.2
FAN13G1038 Fragaria x ananassa HOM05D007115 ORTHO05D008923 8.2e-60 234.6 226 56.2
Dinv23157 Davidia involucrata HOM05D007115 ORTHO05D008923 1.1e-59 234.2 221 61.1
VMungo1309G2111 Vigna mungo HOM05D007115 ORTHO05D008923 2.4e-59 233.0 190 65.8
Glyma.04G196500 Glycine max HOM05D007115 ORTHO05D008923 3.1e-59 232.6 191 64.4
Rhsim08G0191000 Rhododendron simsii HOM05D007115 ORTHO05D008923 3.1e-59 232.6 186 65.1
CsaV3_1G009730 Cucumis sativus L. HOM05D007115 ORTHO05D008923 4.1e-59 232.3 201 62.7
MD06G1140800 Malus domestica HOM05D007115 ORTHO05D008923 7.0e-59 231.5 235 54.9
FAN08G1896 Fragaria x ananassa HOM05D007115 ORTHO05D008923 9.1e-59 231.1 230 54.8
MELO3C002367.2 Cucumis melo HOM05D007115 ORTHO05D008923 2.0e-58 229.9 225 56.9
Medtr3g099140 Medicago truncatula HOM05D007115 ORTHO05D008923 2.0e-58 229.9 198 61.1
Hund02448 Selenicereus undatus HOM05D007115 ORTHO05D008923 2.0e-58 229.9 229 56.3
FAN18G3505 Fragaria x ananassa HOM05D007115 ORTHO05D008923 2.6e-58 229.6 230 54.8
Ca_16052_v3 Cicer arietinum L. HOM05D007115 ORTHO05D008923 5.9e-58 228.4 231 56.3
Lalb_Chr11g0069511 Lupinus albus HOM05D007115 ORTHO05D008923 5.9e-58 228.4 190 61.1
Eucgr.B00101 Eucalyptus grandis HOM05D007115 ORTHO05D008923 1.3e-57 227.3 190 63.7
CSS0028892 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 2.2e-57 226.5 236 56.8
EL10Ac5g11401 Beta vulgaris HOM05D007115 ORTHO05D008923 3.8e-57 225.7 175 64.6
Thecc.03G130400 Theobroma cacao HOM05D007115 ORTHO05D008923 3.8e-57 225.7 191 61.8
CSS0028949 Camellia sinensis var. sinensis HOM05D007115 ORTHO05D008923 5.0e-57 225.3 236 56.4
TWI39G0929 Tripterygium wilfordii HOM05D007115 ORTHO05D008923 5.0e-57 225.3 224 56.7
PGR083G2674 Punica granatum HOM05D007115 ORTHO05D008923 6.5e-57 224.9 169 71.0
vmacro19121 Vaccinium macrocarpon HOM05D007115 ORTHO05D008923 6.5e-57 224.9 201 60.7
CANSAT80G2203 Cannabis sativa HOM05D007115 ORTHO05D008923 8.5e-57 224.6 235 54.9
Ciclev10032623m.g Citrus clementina HOM05D007115 ORTHO05D008923 8.5e-57 224.6 222 58.1
Duzib205G1497 Durio zibethinus HOM05D007115 ORTHO05D008923 8.5e-57 224.6 232 55.6
QL10p002688 Quercus lobata HOM05D007115 ORTHO05D008923 1.1e-56 224.2 282 50.4
TPR.G14207 Trifolium pratense HOM05D007115 ORTHO05D008923 1.1e-56 224.2 222 56.3
Lj5A95G76 Lonicera japonica HOM05D007115 ORTHO05D008923 1.9e-56 223.4 198 63.1
Sc04g0000560 Simmondsia chinensis HOM05D007115 ORTHO05D008923 3.2e-56 222.6 197 59.9
Oeu004998.1 Olea europaea HOM05D007115 ORTHO05D008923 4.7e-55 218.8 213 56.3
Nitab4.5_0000624g0110 Nicotiana tabacum HOM05D007115 ORTHO05D008923 6.1e-55 218.4 228 55.3
Peaxi162Scf00089g00121 Petunia axillaris HOM05D007115 ORTHO05D008923 1.4e-54 217.2 228 55.3
HanXRQChr02g0034681 Helianthus annuus HOM05D007115 ORTHO05D008923 2.3e-54 216.5 224 54.0
Gohir.A11G036350 Gossypium hirsutum HOM05D007115 ORTHO05D008923 4.0e-54 215.7 182 64.3
PGSC0003DMG400015264 Solanum tuberosum HOM05D007115 ORTHO05D008923 1.2e-53 214.2 188 61.7
Lsat_1_v5_gn_1_33120 Lactuca sativa HOM05D007115 ORTHO05D008923 1.5e-53 213.8 240 50.0
Nitab4.5_0001311g0160 Nicotiana tabacum HOM05D007115 ORTHO05D008923 1.5e-53 213.8 184 62.0
Gohir.D11G039800 Gossypium hirsutum HOM05D007115 ORTHO05D008923 3.3e-53 212.6 182 62.6
AUR62034838 Chenopodium quinoa HOM05D007115 ORTHO05D008923 4.4e-53 212.2 170 63.5
CAN.G1611.7 Capsicum annuum HOM05D007115 ORTHO05D008923 7.5e-53 211.5 224 50.9
CDE02G1164 Ceratophyllum demersum HOM05D007115 ORTHO05D008923 1.3e-52 210.7 188 60.1
Gorai.007G042800 Gossypium raimondii HOM05D007115 ORTHO05D008923 1.3e-52 210.7 179 63.7
Solyc03g019660.4 Solanum lycopersicum HOM05D007115 ORTHO05D008923 1.7e-52 210.3 188 60.6
DCAR_007496 Daucus carota HOM05D007115 ORTHO05D008923 2.2e-52 209.9 225 54.7
Sopen03g029960 Solanum pennellii HOM05D007115 ORTHO05D008923 2.8e-52 209.5 232 53.0
MSTRG.11273 Avicennia marina HOM05D007115 ORTHO05D008923 4.1e-51 205.7 184 60.9
Migut.I00540 Erythranthe guttata HOM05D007115 ORTHO05D008923 9.1e-51 204.5 247 51.8
HPP92_023120 Vanilla planifolia HOM05D007115 ORTHO05D008923 9.1e-51 204.5 185 56.8
PSO017G0512 Papaver somniferum HOM05D007115 ORTHO05D008923 2.7e-50 203.0 229 52.0
Cc04_g09720 Coffea canephora HOM05D007115 ORTHO05D008923 5.9e-50 201.8 250 50.0
ECA247G2755 Erigeron canadensis HOM05D001512 ORTHO05D001574 2.9e-49 199.5 232 50.4
TAR622G0416 Trochodendron aralioides HOM05D007115 ORTHO05D008923 3.2e-48 196.1 138 69.6
Nn4g22293 Nelumbo nucifera HOM05D007115 ORTHO05D008923 5.5e-48 195.3 134 67.2
unitig_8.g3030 Utricularia gibba HOM05D007115 ORTHO05D008923 9.4e-48 194.5 192 54.7
SalBow5G3672 Salvia bowleyana HOM05D007115 ORTHO05D008923 4.0e-46 189.1 266 46.2
Zm00001eb334110 Zea mays HOM05D007115 ORTHO05D008923 5.5e-40 168.7 151 61.6
SGA_v2.0_scaffold258G45802 Striga asiatica HOM05D007115 ORTHO05D008923 7.2e-40 168.3 237 44.3
arahy.Tifrunner.gnm1.ann1.YTW6SU Arachis hypogaea HOM05D007115 ORTHO05D008923 3.4e-37 159.5 214 49.1
Os01g0102300 Oryza sativa ssp. japonica HOM05D007115 ORTHO05D008923 3.8e-33 146.0 169 50.9
AUR62029602 Chenopodium quinoa HOM05D007115 ORTHO05D008923 3.3e-32 142.9 99 66.7
COL.COLO4_28141 Corchorus olitorius HOM05D007115 ORTHO05D008923 9.5e-32 141.4 101 65.3
Pp3c6_23090 Physcomitrium patens HOM05D007115 ORTHO05D008923 4.0e-30 136.0 161 44.7
Psat5g051920 Pisum sativum HOM05D007115 ORTHO05D008923 2.4e-27 126.7 117 61.5
AL6G46780 Arabidopsis lyrata HOM05D007115 ORTHO05D008923 1.6e-26 124.0 96 77.1
MBI11_g41395_MAGBIO Magnolia biondii HOM05D007115 ORTHO05D008923 1.5e-24 117.5 124 54.8
arahy.Tifrunner.gnm1.ann1.BUY811 Arachis hypogaea HOM05D007115 ORTHO05D008923 9.5e-24 114.8 118 57.6
SMO356G0600 Selaginella moellendorffii HOM05D007115 ORTHO05D008923 6.2e-23 112.1 176 39.2
Actinidia18342 Actinidia chinensis HOM05D007115 ORTHO05D008923 2.2e-20 103.6 81 58.0
ATR0405G001 Amborella trichopoda HOM05D007115 ORTHO05D008923 3.2e-19 99.8 65 73.8
Sed0002696 Sechium edule HOM05D007115 ORTHO05D008923 1.0e-17 94.7 105 58.1
SEGI_00544 Sequoiadendron giganteum HOM05D007115 ORTHO05D008923 3.1e-14 83.2 109 45.0
Ah.02g114850 Amaranthus hybridus HOM05D007115 ORTHO05D008923 1.2e-10 71.2 140 40.0
Aa31LG10G9070 Aethionema arabicum HOM05D007115 ORTHO05D008923 2.1e-10 70.5 99 57.6
FAN18G1815 Fragaria x ananassa HOM05D007115 ORTHO05D008923 5.1e-09 65.9 55 58.2
Sabra12G0072200 Salix brachista HOM05D007115 ORTHO05D008923 6.6e-09 65.5 60 60.0
Actinidia18341 Actinidia chinensis HOM05D000804 ORTHO05D000989 3.3e-08 63.2 101 47.5
FAN13G2062 Fragaria x ananassa HOM05D007115 ORTHO05D008923 1.2e-07 61.2 73 47.9


User provided reference genes

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