Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p15200 Brassica napus HOM05D006578 ORTHO05D008100 1.5e-153 546.2 278 100.0
BraA01t01458Z Brassica rapa HOM05D006578 ORTHO05D008100 4.7e-128 461.5 243 94.7
BolC1t01839H Brassica oleracea HOM05D006578 ORTHO05D008100 7.0e-124 447.6 243 93.0
C01p19130 Brassica napus HOM05D006578 ORTHO05D008100 1.2e-123 446.8 244 93.0
BcaNung01096 Brassica carinata HOM05D006578 ORTHO05D008100 1.9e-113 412.9 243 86.4
BcaNung04080 Brassica carinata HOM05D006578 ORTHO05D008100 7.3e-113 411.0 245 86.5
Carub.0007s1722 Capsella rubella HOM05D006578 ORTHO05D008100 6.0e-107 391.3 250 83.2
Thhalv10027518m.g Eutrema salsugineum HOM05D006578 ORTHO05D008100 6.0e-107 391.3 249 82.3
AT4G23890 Arabidopsis thaliana HOM05D006578 ORTHO05D008100 1.0e-106 390.6 251 82.5
Sp7g21850 Schrenkiella parvula HOM05D006578 ORTHO05D008100 2.3e-106 389.4 249 83.5
CARHR231290 Cardamine hirsuta HOM05D006578 ORTHO05D008100 8.7e-106 387.5 247 81.0
BraA03t14550Z Brassica rapa HOM05D006578 ORTHO05D008100 2.5e-105 386.0 242 85.5
AL7G29450 Arabidopsis lyrata HOM05D006578 ORTHO05D008100 3.3e-105 385.6 251 81.7
A03p54830 Brassica napus HOM05D006578 ORTHO05D008100 2.0e-102 376.3 242 83.1
BcaC09g50934 Brassica carinata HOM05D006578 ORTHO05D008100 6.4e-101 371.3 198 95.5
Aa31LG6G7150 Aethionema arabicum HOM05D006578 ORTHO05D008100 2.0e-94 349.7 253 71.9
THA.LOC104815081 Tarenaya hassleriana HOM05D006578 ORTHO05D008100 2.7e-91 339.3 251 70.1
Cpa.g.sc79.32 Carica papaya HOM05D006578 ORTHO05D008100 2.7e-75 286.2 238 62.2
Thecc.03G298500 Theobroma cacao HOM05D006578 ORTHO05D008100 2.8e-72 276.2 239 61.1
TWI60G1670 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 6.3e-72 275.0 243 60.5
COL.COLO4_10707 Corchorus olitorius HOM05D006578 ORTHO05D008100 1.1e-71 274.2 238 60.9
Duzib068G0825 Durio zibethinus HOM05D006578 ORTHO05D008100 1.0e-69 267.7 238 59.2
Atru.chr9.1977 Acer truncatum HOM05D006578 ORTHO05D008100 2.2e-69 266.5 243 56.4
Atru.chr9.1992 Acer truncatum HOM05D006578 ORTHO05D008100 2.2e-69 266.5 243 56.4
Ciclev10024562m.g Citrus clementina HOM05D006578 ORTHO05D008100 5.0e-69 265.4 239 58.2
Gohir.A05G346600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 1.1e-68 264.2 241 62.2
Ah.07g197460 Amaranthus hybridus HOM05D006578 ORTHO05D008100 4.2e-68 262.3 251 55.0
CiPaw.11G120900 Carya illinoinensis HOM05D006578 ORTHO05D008100 9.4e-68 261.2 241 57.3
Lj3g0025915 Lotus japonicus HOM05D006578 ORTHO05D008100 7.9e-67 258.1 237 57.4
Ca_18845_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 1.4e-66 257.3 236 57.2
Solyc08g082400.1 Solanum lycopersicum HOM05D006578 ORTHO05D008100 5.1e-66 255.4 243 59.3
Cfa012002 Carpinus fangiana HOM05D006578 ORTHO05D008100 6.7e-66 255.0 245 55.5
FAN18G3822 Fragaria x ananassa HOM05D006578 ORTHO05D008100 6.7e-66 255.0 239 55.2
Sopen08g030660 Solanum pennellii HOM05D006578 ORTHO05D008100 8.8e-66 254.6 242 55.8
EL10Ac5g12919 Beta vulgaris HOM05D006578 ORTHO05D008100 2.5e-65 253.1 251 53.0
PGSC0003DMG400044958 Solanum tuberosum HOM05D006578 ORTHO05D008100 2.5e-65 253.1 242 55.8
FAN13G1942 Fragaria x ananassa HOM05D006578 ORTHO05D008100 3.3e-65 252.7 239 58.2
Potri.001G091300 Populus trichocarpa HOM05D006578 ORTHO05D008100 4.3e-65 252.3 230 56.5
FvH4_5g04650 Fragaria vesca HOM05D006578 ORTHO05D008100 5.7e-65 251.9 239 54.8
FAN18G0518 Fragaria x ananassa HOM05D006578 ORTHO05D008100 7.4e-65 251.5 239 54.8
FAN04G1820 Fragaria x ananassa HOM05D006578 ORTHO05D008100 9.7e-65 251.1 239 58.2
Manes.02G009600 Manihot esculenta HOM05D006578 ORTHO05D008100 1.7e-64 250.4 228 57.9
Potri.003G140400 Populus trichocarpa HOM05D006578 ORTHO05D008100 1.7e-64 250.4 234 54.3
AUR62010844 Chenopodium quinoa HOM05D006578 ORTHO05D008100 2.2e-64 250.0 251 53.4
Prupe.5G120500 Prunus persica HOM05D006578 ORTHO05D008100 2.2e-64 250.0 245 55.1
Sabra01G0067600 Salix brachista HOM05D006578 ORTHO05D008100 2.2e-64 250.0 236 55.1
TAR633G0540 Trochodendron aralioides HOM05D006578 ORTHO05D008100 2.2e-64 250.0 233 54.5
FAN08G0426 Fragaria x ananassa HOM05D006578 ORTHO05D008100 2.8e-64 249.6 239 57.7
ClCG07G011600 Citrullus lanatus HOM05D006578 ORTHO05D008100 3.7e-64 249.2 232 58.2
PGR042G0620 Punica granatum HOM05D006578 ORTHO05D008100 6.3e-64 248.4 243 56.8
Nitab4.5_0001210g0110 Nicotiana tabacum HOM05D006578 ORTHO05D008100 8.2e-64 248.1 241 54.4
QL02p030348 Quercus lobata HOM05D006578 ORTHO05D008100 8.2e-64 248.1 183 66.7
CAN.G1804.8 Capsicum annuum HOM05D006578 ORTHO05D008100 1.1e-63 247.7 248 53.6
Medtr8g032260 Medicago truncatula HOM05D006578 ORTHO05D008100 1.4e-63 247.3 245 55.5
MSTRG.11922 Avicennia marina HOM05D006578 ORTHO05D008100 4.1e-63 245.7 220 55.9
MELO3C016296.2 Cucumis melo HOM05D006578 ORTHO05D008100 4.1e-63 245.7 235 54.9
CsaV3_4G006610 Cucumis sativus L. HOM05D006578 ORTHO05D008100 5.3e-63 245.4 230 55.7
Oeu009960.1 Olea europaea HOM05D006578 ORTHO05D008100 9.1e-63 244.6 236 54.7
Cc08_g16100 Coffea canephora HOM05D006578 ORTHO05D008100 1.5e-62 243.8 237 55.7
Hma1.2p1_0359F.1_g135230 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 1.5e-62 243.8 239 52.7
Glyma.07G075100 Glycine max HOM05D006578 ORTHO05D008100 2.0e-62 243.4 241 55.2
Dinv37530 Davidia involucrata HOM05D006578 ORTHO05D008100 2.6e-62 243.0 226 55.8
Phvul.010G094000 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 2.6e-62 243.0 238 55.0
Peaxi162Scf00074g00082 Petunia axillaris HOM05D006578 ORTHO05D008100 1.0e-61 241.1 231 56.3
CSS0036002 Camellia sinensis var. sinensis HOM05D006578 ORTHO05D008100 3.8e-61 239.2 242 53.3
Lsat_1_v5_gn_3_10861 Lactuca sativa HOM05D006578 ORTHO05D008100 1.1e-60 237.7 241 57.7
Haze_09067 Corylus avellana HOM05D006578 ORTHO05D008100 1.4e-60 237.3 188 64.4
Sed0010985 Sechium edule HOM05D006578 ORTHO05D008100 1.9e-60 236.9 230 53.0
VMungo0331G0206 Vigna mungo HOM05D005332 ORTHO05D006861 2.5e-60 236.5 236 53.0
Nitab4.5_0006775g0020 Nicotiana tabacum HOM05D006578 ORTHO05D008100 4.2e-60 235.7 230 54.8
Migut.A00640 Erythranthe guttata HOM05D006578 ORTHO05D008100 2.1e-59 233.4 231 56.7
HanXRQChr17g0534801 Helianthus annuus HOM05D006578 ORTHO05D008100 2.1e-59 233.4 238 55.9
Lalb_Chr04g0256691 Lupinus albus HOM05D006578 ORTHO05D008100 2.7e-59 233.0 245 52.7
Actinidia27316 Actinidia chinensis HOM05D006578 ORTHO05D008100 1.0e-58 231.1 178 65.2
ATR0796G340 Amborella trichopoda HOM05D006578 ORTHO05D008100 1.0e-58 231.1 241 52.7
Gorai.012G073800 Gossypium raimondii HOM05D006578 ORTHO05D008100 1.4e-58 230.7 242 55.0
Gohir.D04G065600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 3.0e-58 229.6 242 55.0
unitig_32.g10973 Utricularia gibba HOM05D006578 ORTHO05D008100 6.7e-58 228.4 208 54.8
PSO761G0627 Papaver somniferum HOM05D006578 ORTHO05D008100 9.7e-57 224.6 263 48.3
Lj2P167T19 Lonicera japonica HOM05D006578 ORTHO05D008100 3.7e-56 222.6 181 62.4
BcaNung04242 Brassica carinata HOM05D006578 ORTHO05D008100 4.8e-56 222.2 167 76.6
BolC7t45814H Brassica oleracea HOM05D006578 ORTHO05D008100 4.8e-56 222.2 167 76.6
PSO210G4984 Papaver somniferum HOM05D006578 ORTHO05D008100 8.2e-56 221.5 260 50.0
C07p53190 Brassica napus HOM05D006578 ORTHO05D008100 1.1e-55 221.1 167 76.0
DCAR_029888 Daucus carota HOM05D006578 ORTHO05D008100 1.4e-55 220.7 222 53.2
ECA246G0449 Erigeron canadensis HOM05D001832 ORTHO05D001861 7.7e-54 214.9 219 55.7
Aqoxy2G01516 Aquilegia oxysepala HOM05D006578 ORTHO05D008100 6.5e-53 211.8 257 51.8
AUR62019843 Chenopodium quinoa HOM05D006578 ORTHO05D008100 2.5e-52 209.9 251 47.4
SEGI_09764 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 1.6e-51 207.2 205 52.2
SEGI_13573 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 1.6e-51 207.2 205 52.2
FAN13G3291 Fragaria x ananassa HOM05D006578 ORTHO05D008100 1.5e-49 200.7 185 61.1
Hma1.2p1_0359F.1_g135240 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 1.5e-49 200.7 138 71.0
Os07g0196200 Oryza sativa ssp. japonica HOM05D006578 ORTHO05D008100 4.4e-49 199.1 227 48.5
Sabra03G0101400 Salix brachista HOM05D006578 ORTHO05D008100 2.8e-48 196.4 234 47.0
Psat4g152960 Pisum sativum HOM05D006578 ORTHO05D008100 3.7e-48 196.1 229 46.7
Zm00001eb224490 Zea mays HOM05D006578 ORTHO05D008100 6.3e-48 195.3 189 54.0
GSVIVG01019536001 Vitis vinifera HOM05D006578 ORTHO05D008100 4.0e-42 176.0 237 45.1
Mapoly0067s0043 Marchantia polymorpha HOM05D006578 ORTHO05D008100 2.0e-41 173.7 223 44.8
Pp3c11_19730 Physcomitrium patens HOM05D006578 ORTHO05D008100 4.1e-39 166.0 195 44.1
CBR_g28643 Chara braunii HOM05D006578 ORTHO05D008100 3.2e-36 156.4 184 45.7
AagrBONN_evm.TU.Sc2ySwM_117.36 Anthoceros agrestis HOM05D006578 ORTHO05D008100 1.2e-35 154.5 188 42.6
SMO146G0113 Selaginella moellendorffii HOM05D006578 ORTHO05D008100 2.2e-32 143.7 208 42.8
Medtr7g076620 Medicago truncatula HOM05D006578 ORTHO05D008100 1.8e-23 114.0 126 49.2
CiPaw.12G082500 Carya illinoinensis HOM05D006578 ORTHO05D008100 2.4e-23 113.6 218 36.2
TWI81G0713 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 5.4e-23 112.5 135 49.6
SalBow1G4365 Salvia bowleyana HOM05D006578 ORTHO05D008100 3.5e-22 109.8 187 39.6
SalBow1G5827 Salvia bowleyana HOM05D006578 ORTHO05D008100 3.5e-22 109.8 187 39.6
TPR.G17579 Trifolium pratense HOM05D006578 ORTHO05D008100 2.9e-21 106.7 131 44.3
arahy.Tifrunner.gnm1.ann1.6WXN94 Arachis hypogaea HOM05D006578 ORTHO05D008100 6.6e-21 105.5 134 44.8
Ca_07882_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 6.6e-21 105.5 124 50.8
VMungo1383G2377 Vigna mungo HOM05D006578 ORTHO05D008100 1.1e-20 104.8 123 50.4
Glyma.09G263100 Glycine max HOM05D006578 ORTHO05D008100 2.5e-20 103.6 142 46.5
Psat3g111760 Pisum sativum HOM05D006578 ORTHO05D008100 7.3e-20 102.1 95 53.7
arahy.Tifrunner.gnm1.ann1.UYM9MT Arachis hypogaea HOM05D006578 ORTHO05D008100 2.8e-19 100.1 135 43.7
Lj1g0003243 Lotus japonicus HOM05D006578 ORTHO05D008100 1.0e-18 98.2 110 51.8
Phvul.008G068900 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 1.0e-18 98.2 143 45.5
Glyma.18G229100 Glycine max HOM05D006578 ORTHO05D008100 3.1e-18 96.7 147 44.2
Sabra15G0075700 Salix brachista HOM05D000345 ORTHO05D000215 9.8e-17 91.7 100 51.0
Nn4g25270 Nelumbo nucifera HOM05D006578 ORTHO05D008100 2.2e-16 90.5 111 45.0
Sc07g0010050 Simmondsia chinensis HOM05D006578 ORTHO05D008100 1.9e-15 87.4 129 39.5
SGA_v2.0_scaffold96G29015 Striga asiatica HOM05D003962 ORTHO05D004714 2.0e-14 84.0 111 42.3
HPP92_001215 Vanilla planifolia HOM05D006578 ORTHO05D008100 3.0e-13 80.1 86 52.3
Glyma.03G015000 Glycine max HOM05D006578 ORTHO05D008100 1.6e-11 74.3 116 39.7
Oeu054024.1 Olea europaea HOM05D006578 ORTHO05D008100 1.5e-09 67.8 64 51.6
Sabra10G0172600 Salix brachista HOM05D006578 ORTHO05D008100 1.2e-06 58.2 55 60.0


User provided reference genes

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