Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p14720 Brassica napus HOM05D007942 ORTHO05D010045 5.2e-66 254.2 126 100.0
BraA01t01411Z Brassica rapa HOM05D007942 ORTHO05D010045 5.6e-44 181.0 88 100.0
C01p18220 Brassica napus HOM05D007942 ORTHO05D010045 4.0e-42 174.9 88 96.6
BolC1t01748H Brassica oleracea HOM05D007942 ORTHO05D010045 4.0e-42 174.9 88 96.6
BcaC09g50992 Brassica carinata HOM05D007942 ORTHO05D010045 2.9e-40 168.7 88 95.5
BcaNung01050 Brassica carinata HOM05D007942 ORTHO05D010045 4.7e-35 151.4 88 86.4
CARHR230820 Cardamine hirsuta HOM05D007942 ORTHO05D010045 5.2e-34 147.9 88 80.7
AL7G29970 Arabidopsis lyrata HOM05D007942 ORTHO05D010045 6.8e-34 147.5 88 80.7
Thhalv10026690m.g Eutrema salsugineum HOM05D007942 ORTHO05D010045 2.0e-33 146.0 88 81.8
AT4G23493 Arabidopsis thaliana HOM05D007942 ORTHO05D010045 4.1e-31 138.3 89 79.8
Carub.0007s1768 Capsella rubella HOM05D007942 ORTHO05D010045 5.4e-31 137.9 88 75.0
A08p16150 Brassica napus HOM05D007942 ORTHO05D010045 3.9e-29 131.7 88 72.7
BcaB03g11761 Brassica carinata HOM05D007942 ORTHO05D010045 6.6e-29 131.0 88 73.9
BcaB03g11762 Brassica carinata HOM05D007942 ORTHO05D010045 6.6e-29 131.0 88 73.9
C03p84680 Brassica napus HOM05D007942 ORTHO05D010045 2.5e-28 129.0 86 72.1
BolC3t20755H Brassica oleracea HOM05D007942 ORTHO05D010045 2.5e-28 129.0 86 72.1
Aa31LG6G6680 Aethionema arabicum HOM05D007942 ORTHO05D010045 3.6e-27 125.2 86 73.3
BcaC01g00815 Brassica carinata HOM05D007942 ORTHO05D010045 3.1e-26 122.1 86 70.9
THA.LOC104814669 Tarenaya hassleriana HOM05D007942 ORTHO05D010045 5.3e-18 94.7 90 57.8
Nitab4.5_0002282g0090 Nicotiana tabacum HOM05D007942 ORTHO05D010045 7.1e-15 84.3 80 58.8
PGSC0003DMG400012189 Solanum tuberosum HOM05D007942 ORTHO05D010045 4.6e-14 81.6 79 57.0
Nitab4.5_0000769g0190 Nicotiana tabacum HOM05D007942 ORTHO05D010045 6.0e-14 81.3 82 54.9
Solyc08g081455.1 Solanum lycopersicum HOM05D007942 ORTHO05D010045 1.7e-13 79.7 79 54.4
Sopen08g029790 Solanum pennellii HOM05D007942 ORTHO05D010045 6.6e-13 77.8 73 56.2
AUR62010730 Chenopodium quinoa HOM05D007942 ORTHO05D010045 3.3e-12 75.5 76 46.1
MD06G1089100 Malus domestica HOM05D007942 ORTHO05D010045 4.3e-12 75.1 82 51.2
Peaxi162Scf00074g01832 Petunia axillaris HOM05D007942 ORTHO05D010045 4.3e-12 75.1 62 54.8
Gohir.A08G115301 Gossypium hirsutum HOM05D007942 ORTHO05D010045 5.6e-12 74.7 79 48.1
Gorai.004G139100 Gossypium raimondii HOM05D007942 ORTHO05D010045 1.3e-11 73.6 79 48.1
Ciclev10023096m.g Citrus clementina HOM05D007942 ORTHO05D010045 2.1e-11 72.8 89 48.3
CAN.G532.20 Capsicum annuum HOM05D007942 ORTHO05D010045 2.8e-11 72.4 65 56.9
Psat2g183000 Pisum sativum HOM05D007942 ORTHO05D010045 6.2e-11 71.2 81 45.7
Hund11441 Selenicereus undatus HOM05D007942 ORTHO05D010045 1.1e-10 70.5 75 48.0
SGA_v2.0_scaffold111G31481 Striga asiatica HOM05D007942 ORTHO05D010045 2.4e-10 69.3 81 43.2
HanXRQChr13g0415991 Helianthus annuus HOM05D007942 ORTHO05D010045 4.0e-10 68.6 90 38.9
DCAR_004614 Daucus carota HOM05D007942 ORTHO05D010045 5.3e-10 68.2 83 45.8
Prupe.5G105000 Prunus persica HOM05D007942 ORTHO05D010045 5.3e-10 68.2 90 44.4
Lsat_1_v5_gn_6_85240 Lactuca sativa HOM05D007942 ORTHO05D010045 6.9e-10 67.8 77 42.9
GSVIVG01019402001 Vitis vinifera HOM05D007942 ORTHO05D010045 6.9e-10 67.8 89 42.7
Lsat_1_v5_gn_6_85200 Lactuca sativa HOM05D007942 ORTHO05D010045 1.5e-09 66.6 60 48.3
Cc03_g15820 Coffea canephora HOM05D007942 ORTHO05D010045 3.4e-09 65.5 64 48.4
Cc08_g15120 Coffea canephora HOM05D007942 ORTHO05D010045 3.4e-09 65.5 64 48.4
Glyma.01G221800 Glycine max HOM05D007942 ORTHO05D010045 3.4e-09 65.5 79 44.3
RcHm_v2.0_Chr7g0196851 Rosa chinensis HOM05D007942 ORTHO05D010045 5.8e-09 64.7 79 49.4
TPR.G6630 Trifolium pratense HOM05D007942 ORTHO05D010045 7.6e-09 64.3 93 41.9
TWI81G0525 Tripterygium wilfordii HOM05D007942 ORTHO05D010045 9.9e-09 63.9 89 39.3
Ah.07g196590 Amaranthus hybridus HOM05D007942 ORTHO05D010045 1.7e-08 63.2 72 38.9
Ca_24542_v3 Cicer arietinum L. HOM05D007942 ORTHO05D010045 2.2e-08 62.8 94 41.5
ECA240G3258 Erigeron canadensis HOM05D007942 ORTHO05D010045 2.2e-08 62.8 61 45.9
Eucgr.E00650 Eucalyptus grandis HOM05D007942 ORTHO05D010045 3.8e-08 62.0 82 40.2
Manes.02G018400 Manihot esculenta HOM05D007942 ORTHO05D010045 3.8e-08 62.0 73 42.5
EL10Ac5g12820 Beta vulgaris HOM05D007942 ORTHO05D010045 4.9e-08 61.6 64 43.8
SalBow8G0610 Salvia bowleyana HOM05D007942 ORTHO05D010045 6.4e-08 61.2 80 41.2
Thecc.03G284800 Theobroma cacao HOM05D007942 ORTHO05D010045 6.4e-08 61.2 75 44.0
Dinv37608 Davidia involucrata HOM05D007942 ORTHO05D010045 8.4e-08 60.8 76 42.1
Migut.E01201 Erythranthe guttata HOM05D007942 ORTHO05D010045 8.4e-08 60.8 85 40.0
vmacro13966 Vaccinium macrocarpon HOM05D007942 ORTHO05D010045 1.4e-07 60.1 68 44.1
Haze_08827 Corylus avellana HOM05D007942 ORTHO05D010045 1.9e-07 59.7 73 46.6
FAN18G2800 Fragaria x ananassa HOM05D007942 ORTHO05D010045 1.9e-07 59.7 78 43.6
ClCG01G002420 Citrullus lanatus HOM05D007942 ORTHO05D010045 2.4e-07 59.3 87 40.2
Medtr5g010040 Medicago truncatula HOM05D007942 ORTHO05D010045 2.4e-07 59.3 78 41.0
Lalb_Chr05g0211711 Lupinus albus HOM05D007942 ORTHO05D010045 3.2e-07 58.9 78 43.6
Cpa.g.sc180.26 Carica papaya HOM05D007942 ORTHO05D010045 4.2e-07 58.5 75 37.3
Duzib205G1349 Durio zibethinus HOM05D007942 ORTHO05D010045 4.2e-07 58.5 63 46.0
Potri.003G131550 Populus trichocarpa HOM05D007942 ORTHO05D010045 7.1e-07 57.8 89 40.4
BraA08t33585Z Brassica rapa HOM05D007942 ORTHO05D010045 1.2e-06 57.0 43 67.4
MELO3C005703.2 Cucumis melo HOM05D007942 ORTHO05D010045 3.5e-06 55.5 87 39.1


User provided reference genes

Program Settings