Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p14190 Brassica napus HOM05D009057 ORTHO05D011698 6.2e-54 213.8 101 100.0
A03p11190 Brassica napus HOM05D009057 ORTHO05D011698 5.5e-50 200.7 100 95.0
A09p23580 Brassica napus HOM05D009057 ORTHO05D011698 1.0e-48 196.4 100 91.0
A09p44690 Brassica napus HOM05D009057 ORTHO05D011698 2.3e-48 195.3 100 93.0
A03p65000 Brassica napus HOM05D009057 ORTHO05D011698 5.1e-48 194.1 100 92.0
BraA01t00192Z Brassica rapa HOM05D009057 ORTHO05D011698 4.6e-41 171.0 84 96.4
BraA06t26621Z Brassica rapa HOM05D009057 ORTHO05D011698 8.7e-40 166.8 84 94.0
BraA03t15559Z Brassica rapa HOM05D009057 ORTHO05D011698 6.3e-38 160.6 83 91.6
BraA09t36710Z Brassica rapa HOM05D009057 ORTHO05D011698 4.1e-37 157.9 84 90.5
BraA06t24249Z Brassica rapa HOM05D009057 ORTHO05D107603 1.0e-32 143.3 84 85.7
A09p48740 Brassica napus HOM05D009057 ORTHO05D032987 6.5e-27 124.0 100 64.0
BraA09t40326Z Brassica rapa HOM05D009057 ORTHO05D032987 6.5e-27 124.0 100 64.0
A03p41190 Brassica napus HOM05D009057 ORTHO05D032987 4.6e-25 117.9 100 62.0
A10p33500 Brassica napus HOM05D009057 ORTHO05D011698 5.0e-11 71.2 69 58.0
BcaNung04449 Brassica carinata HOM05D009057 ORTHO05D011698 8.5e-11 70.5 69 58.0
BraA10t45380Z Brassica rapa HOM05D009057 ORTHO05D011698 2.5e-10 68.9 45 73.3
AL6G11310 Arabidopsis lyrata HOM05D009057 ORTHO05D011698 3.2e-10 68.6 45 73.3
BolC9t60174H Brassica oleracea HOM05D000031 ORTHO05D001864 7.2e-10 67.4 45 71.1
CARHR211270 Cardamine hirsuta HOM05D009057 ORTHO05D011698 9.4e-10 67.0 45 71.1
AT5G02090 Arabidopsis thaliana HOM05D009057 ORTHO05D011698 1.2e-09 66.6 45 71.1
Thhalv10015172m.g Eutrema salsugineum HOM05D009057 ORTHO05D011698 6.1e-09 64.3 45 68.9
A10p33520 Brassica napus HOM05D000031 ORTHO05D001864 3.0e-08 62.0 62 54.8
BraA10t45382Z Brassica rapa HOM05D000031 ORTHO05D001864 5.2e-08 61.2 45 66.7
BcaNung04451 Brassica carinata HOM05D009057 ORTHO05D011698 2.6e-07 58.9 62 53.2
A03p00520 Brassica napus HOM05D009057 ORTHO05D011698 3.3e-07 58.5 41 70.7
BraA03t09443Z Brassica rapa HOM05D009057 ORTHO05D011698 3.3e-07 58.5 41 70.7
BcaB01g06211 Brassica carinata HOM05D009057 ORTHO05D011698 9.7e-07 57.0 41 65.9
Thhalv10015182m.g Eutrema salsugineum HOM05D009057 ORTHO05D011698 9.7e-07 57.0 45 60.0
BcaB01g06070 Brassica carinata HOM05D009057 ORTHO05D011698 1.7e-06 56.2 41 68.3
C03p00790 Brassica napus HOM05D009057 ORTHO05D011698 1.7e-06 56.2 41 68.3
BolC3t12642H Brassica oleracea HOM05D009057 ORTHO05D011698 1.7e-06 56.2 41 68.3
BcaNung04452 Brassica carinata HOM05D009057 ORTHO05D011698 2.8e-06 55.5 70 45.7


User provided reference genes

Program Settings