Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p14120 Brassica napus HOM05D001031 ORTHO05D027116 1.6e-55 219.2 108 100.0
BraA01t01360Z Brassica rapa HOM05D037734 ORTHO05D027116 9.7e-37 156.8 108 79.6
BraA03t14455Z Brassica rapa HOM05D001031 ORTHO05D000857 3.4e-34 148.3 105 75.2
C07p52260 Brassica napus HOM05D001031 ORTHO05D000857 4.5e-34 147.9 109 75.2
BolC7t45720H Brassica oleracea HOM05D001031 ORTHO05D000857 4.5e-34 147.9 109 75.2
CARHR229940 Cardamine hirsuta HOM05D001031 ORTHO05D000857 1.0e-33 146.7 96 77.1
A03p53860 Brassica napus HOM05D001031 ORTHO05D000857 1.1e-32 143.3 109 73.4
Thhalv10027461m.g Eutrema salsugineum HOM05D001031 ORTHO05D000857 1.9e-32 142.5 101 73.3
Carub.0007s1838 Capsella rubella HOM05D001031 ORTHO05D000857 5.5e-32 141.0 111 69.4
AL7G30620 Arabidopsis lyrata HOM05D001031 ORTHO05D000857 6.1e-31 137.5 100 70.0
BcaNung01662 Brassica carinata HOM05D001031 ORTHO05D000857 1.5e-29 132.9 92 77.2
BcaNung01663 Brassica carinata HOM05D001031 ORTHO05D000857 1.5e-29 132.9 92 77.2
AT4G22900 Arabidopsis thaliana HOM05D001031 ORTHO05D000857 4.8e-28 127.9 100 69.0
Aa31LG6G4970 Aethionema arabicum HOM05D001031 ORTHO05D000857 4.2e-24 114.8 107 58.9
THA.LOC104814149 Tarenaya hassleriana HOM05D001031 ORTHO05D000857 5.5e-24 114.4 104 59.6
Thhalv10029314m.g Eutrema salsugineum HOM05D001031 ORTHO05D000857 7.2e-24 114.0 103 59.2
CARHR254340 Cardamine hirsuta HOM05D001031 ORTHO05D000857 1.4e-22 109.8 105 56.2
AT4G11950 Arabidopsis thaliana HOM05D001031 ORTHO05D000857 1.8e-22 109.4 81 66.7
C01p17380 Brassica napus HOM05D037734 ORTHO05D027116 1.8e-22 109.4 55 94.5
BcaC04g21179 Brassica carinata HOM05D001031 ORTHO05D000857 1.5e-21 106.3 107 57.9
Carub.0006s3105 Capsella rubella HOM05D001031 ORTHO05D000857 5.7e-21 104.4 81 61.7
Sp6g05560 Schrenkiella parvula HOM05D001031 ORTHO05D000857 5.7e-21 104.4 81 65.4
AL6G46720 Arabidopsis lyrata HOM05D001031 ORTHO05D000857 8.2e-20 100.5 81 63.0
THA.LOC104806357 Tarenaya hassleriana HOM05D001031 ORTHO05D000857 1.8e-19 99.4 81 61.7
BcaC04g21181 Brassica carinata HOM05D001031 ORTHO05D000857 5.3e-19 97.8 83 60.2
A09p27180 Brassica napus HOM05D001031 ORTHO05D000857 5.3e-19 97.8 83 60.2
C09p34500 Brassica napus HOM05D001031 ORTHO05D000857 5.3e-19 97.8 83 60.2
BolC9t56294H Brassica oleracea HOM05D001031 ORTHO05D000857 5.3e-19 97.8 83 60.2
BraA09t38286Z Brassica rapa HOM05D001031 ORTHO05D000857 1.5e-18 96.3 83 60.2
Aa31LG9G10520 Aethionema arabicum HOM05D001031 ORTHO05D000857 1.3e-17 93.2 82 59.8
BcaNung01018 Brassica carinata HOM05D001031 ORTHO05D000857 6.1e-15 84.3 59 71.2
BcaB01g01694 Brassica carinata HOM05D001031 ORTHO05D000857 6.3e-12 74.3 59 61.0
AL8G33770 Arabidopsis lyrata HOM05D001031 ORTHO05D000857 7.2e-08 60.8 85 47.1


User provided reference genes

Program Settings