Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p12830 Brassica napus HOM05D006195 ORTHO05D007710 7.1e-264 913.3 436 100.0
BraA01t01227Z Brassica rapa HOM05D006195 ORTHO05D007710 1.2e-258 896.0 435 98.4
C01p15450 Brassica napus HOM05D006195 ORTHO05D007710 2.6e-250 868.2 434 95.2
BolC1t01499H Brassica oleracea HOM05D006195 ORTHO05D007710 2.6e-250 868.2 434 95.2
BcaNung02791 Brassica carinata HOM05D006195 ORTHO05D007710 5.9e-242 840.5 435 93.1
Sp7g19630 Schrenkiella parvula HOM05D006195 ORTHO05D007710 8.5e-233 810.1 435 89.9
Thhalv10025271m.g Eutrema salsugineum HOM05D006195 ORTHO05D007710 1.8e-230 802.4 431 90.0
Carub.0007s1990 Capsella rubella HOM05D006195 ORTHO05D007710 6.7e-230 800.4 435 89.0
AL7G32530 Arabidopsis lyrata HOM05D006195 ORTHO05D007710 3.3e-229 798.1 429 89.0
AT4G21520 Arabidopsis thaliana HOM05D006195 ORTHO05D007710 1.0e-225 786.6 426 89.7
CARHR228180 Cardamine hirsuta HOM05D006195 ORTHO05D007710 8.8e-222 773.5 428 86.7
Aa31LG6G3540 Aethionema arabicum HOM05D006195 ORTHO05D007710 9.7e-213 743.4 417 86.1
THA.LOC104806275 Tarenaya hassleriana HOM05D006195 ORTHO05D007710 1.8e-195 686.0 397 82.1
Cpa.g.sc27.120 Carica papaya HOM05D006195 ORTHO05D007710 5.8e-173 611.3 432 69.9
CsaV3_1G011800 Cucumis sativus L. HOM05D006195 ORTHO05D007710 9.9e-173 610.5 412 69.9
Gohir.D05G168600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 9.9e-173 610.5 374 75.1
Gorai.009G173800 Gossypium raimondii HOM05D006195 ORTHO05D007710 3.7e-172 608.6 375 75.2
Gohir.A05G165600 Gossypium hirsutum HOM05D006195 ORTHO05D007710 8.3e-172 607.4 375 74.9
Sed0022279 Sechium edule HOM05D006195 ORTHO05D007710 4.1e-171 605.1 414 68.1
RcHm_v2.0_Chr5g0006371 Rosa chinensis HOM05D006195 ORTHO05D007710 9.2e-171 604.0 402 70.4
QL04p018330 Quercus lobata HOM05D006195 ORTHO05D007710 1.2e-170 603.6 391 71.6
ClCG03G005530 Citrullus lanatus HOM05D006195 ORTHO05D007710 1.6e-170 603.2 413 69.0
Eucgr.E03701 Eucalyptus grandis HOM05D006195 ORTHO05D007710 1.6e-170 603.2 407 68.1
FvH4_3g04030 Fragaria vesca HOM05D006195 ORTHO05D007710 2.7e-170 602.4 405 70.4
Thecc.06G199000 Theobroma cacao HOM05D006195 ORTHO05D007710 6.0e-170 601.3 371 74.9
Prupe.4G036600 Prunus persica HOM05D006195 ORTHO05D007710 7.8e-170 600.9 404 71.0
CiPaw.09G158100 Carya illinoinensis HOM05D006195 ORTHO05D007710 1.3e-169 600.1 410 69.8
MD10G1303200 Malus domestica HOM05D006195 ORTHO05D007710 1.7e-169 599.7 400 71.0
FAN11G1039 Fragaria x ananassa HOM05D006195 ORTHO05D007710 3.9e-169 598.6 405 69.6
CANSAT56G3748 Cannabis sativa HOM05D006195 ORTHO05D007710 6.6e-169 597.8 400 70.2
TWI38G0511 Tripterygium wilfordii HOM05D006195 ORTHO05D007710 6.6e-169 597.8 425 67.1
Actinidia24060 Actinidia chinensis HOM05D006195 ORTHO05D007710 2.5e-168 595.9 383 72.1
Lsat_1_v5_gn_7_19641 Lactuca sativa HOM05D006195 ORTHO05D007710 3.3e-168 595.5 414 68.6
SGA_v2.0_scaffold7G03951 Striga asiatica HOM05D006195 ORTHO05D007710 4.3e-168 595.1 411 68.1
Potri.011G043000 Populus trichocarpa HOM05D006195 ORTHO05D007710 5.6e-168 594.7 375 72.8
Atru.chr10.2006 Acer truncatum HOM05D006195 ORTHO05D007710 1.2e-167 593.6 427 66.5
COL.COLO4_31584 Corchorus olitorius HOM05D006195 ORTHO05D007710 1.6e-167 593.2 371 73.9
EL10Ac8g20527 Beta vulgaris HOM05D006195 ORTHO05D007710 3.6e-167 592.0 401 69.8
PGR042G1193 Punica granatum HOM05D006195 ORTHO05D007710 3.6e-167 592.0 410 67.1
HanXRQChr14g0437281 Helianthus annuus HOM05D006195 ORTHO05D007710 6.2e-167 591.3 386 71.0
Ciclev10015313m.g Citrus clementina HOM05D006195 ORTHO05D007710 1.8e-166 589.7 438 65.3
Migut.M01211 Erythranthe guttata HOM05D006195 ORTHO05D007710 1.8e-166 589.7 413 67.1
Migut.I00196 Erythranthe guttata HOM05D006195 ORTHO05D007710 2.6e-165 585.9 413 66.8
GSVIVG01003194001 Vitis vinifera HOM05D006195 ORTHO05D007710 4.4e-165 585.1 404 67.1
Rhsim02G0120000 Rhododendron simsii HOM05D006195 ORTHO05D007710 7.6e-165 584.3 426 66.7
Sc17g0006620 Simmondsia chinensis HOM05D006195 ORTHO05D007710 7.6e-165 584.3 403 68.5
Lalb_Chr09g0327371 Lupinus albus HOM05D006195 ORTHO05D007710 1.7e-164 583.2 416 66.3
Medtr4g091080 Medicago truncatula HOM05D006195 ORTHO05D007710 4.9e-164 581.6 427 66.7
Ca_18483_v3 Cicer arietinum L. HOM05D006195 ORTHO05D007710 6.4e-164 581.3 429 65.7
Lj2A280G38 Lonicera japonica HOM05D006195 ORTHO05D007710 6.4e-164 581.3 438 64.8
SalBow8G2471 Salvia bowleyana HOM05D006195 ORTHO05D007710 8.4e-164 580.9 378 71.2
PSO675G1294 Papaver somniferum HOM05D006195 ORTHO05D007710 1.4e-163 580.1 431 65.9
arahy.Tifrunner.gnm1.ann1.IWY5CJ Arachis hypogaea HOM05D006195 ORTHO05D007710 3.2e-163 578.9 405 67.4
TAR629G3096 Trochodendron aralioides HOM05D006195 ORTHO05D007710 3.2e-163 578.9 384 69.5
arahy.Tifrunner.gnm1.ann1.HDHM3Z Arachis hypogaea HOM05D006195 ORTHO05D007710 7.1e-163 577.8 394 68.3
MSTRG.8639 Avicennia marina HOM05D006195 ORTHO05D007710 7.8e-162 574.3 385 69.6
MD05G1325300 Malus domestica HOM05D006195 ORTHO05D007710 7.8e-162 574.3 402 68.7
Solyc02g079110.3 Solanum lycopersicum HOM05D006195 ORTHO05D007710 1.7e-161 573.2 383 69.7
Sopen02g023920 Solanum pennellii HOM05D006195 ORTHO05D007710 1.7e-161 573.2 383 69.7
Oeu038214.1 Olea europaea HOM05D006195 ORTHO05D007710 6.6e-161 571.2 392 69.4
MBI14_g15641_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 5.6e-160 568.2 412 66.5
Manes.17G039200 Manihot esculenta HOM05D006195 ORTHO05D007710 7.3e-160 567.8 364 72.3
Phvul.002G222200 Phaseolus vulgaris HOM05D006195 ORTHO05D007710 1.3e-159 567.0 415 66.3
Aqoxy1G02740 Aquilegia oxysepala HOM05D006195 ORTHO05D007710 1.6e-159 566.6 384 69.3
PGSC0003DMG400022408 Solanum tuberosum HOM05D006195 ORTHO05D007710 1.6e-159 566.6 404 66.1
vmacro15867 Vaccinium macrocarpon HOM05D006195 ORTHO05D007710 4.8e-159 565.1 405 67.7
VMungo0251G2515 Vigna mungo HOM05D006195 ORTHO05D007710 4.8e-159 565.1 420 65.0
Haze_06571 Corylus avellana HOM05D006195 ORTHO05D007710 1.1e-158 563.9 387 69.5
Cc02_g12450 Coffea canephora HOM05D006195 ORTHO05D007710 2.4e-158 562.8 402 67.4
Glyma.07G190200 Glycine max HOM05D006195 ORTHO05D007710 6.9e-158 561.2 397 67.8
Peaxi162Scf00355g00914 Petunia axillaris HOM05D006195 ORTHO05D007710 1.2e-157 560.5 446 61.9
Cfa000355 Carpinus fangiana HOM05D006195 ORTHO05D007710 2.0e-157 559.7 430 64.4
ECA236G2696 Erigeron canadensis HOM05D006195 ORTHO05D007710 7.6e-157 557.8 359 72.4
TPR.G32422 Trifolium pratense HOM05D006195 ORTHO05D007710 6.4e-156 554.7 428 64.5
Duzib235G1322 Durio zibethinus HOM05D006195 ORTHO05D007710 8.4e-156 554.3 376 69.7
FAN25G3765 Fragaria x ananassa HOM05D006195 ORTHO05D007710 1.1e-155 553.9 408 65.7
ATR0693G097 Amborella trichopoda HOM05D006195 ORTHO05D007710 1.4e-155 553.5 406 64.0
Sabra11G0029600 Salix brachista HOM05D006195 ORTHO05D001726 1.2e-154 550.4 361 71.7
Nitab4.5_0009994g0040 Nicotiana tabacum HOM05D006195 ORTHO05D007710 2.7e-154 549.3 463 59.2
MELO3C002557.2 Cucumis melo HOM05D006195 ORTHO05D007710 4.3e-152 542.0 415 63.9
Lj4g0017156 Lotus japonicus HOM05D006195 ORTHO05D007710 9.6e-152 540.8 420 61.2
Os03g0738000 Oryza sativa ssp. japonica HOM05D006195 ORTHO05D007710 4.0e-150 535.4 384 66.1
FAN21G3429 Fragaria x ananassa HOM05D006195 ORTHO05D007710 4.5e-149 531.9 411 63.5
CSS0049192 Camellia sinensis var. sinensis HOM05D006195 ORTHO05D007710 1.0e-145 520.8 364 66.2
Zm00001eb056530 Zea mays HOM05D006195 ORTHO05D007710 1.8e-145 520.0 386 64.5
DCAR_008069 Daucus carota HOM05D006195 ORTHO05D007710 2.3e-145 519.6 440 58.6
Ah.14g088920 Amaranthus hybridus HOM05D006195 ORTHO05D007710 1.1e-144 517.3 409 61.4
Pp3c6_22670 Physcomitrium patens HOM05D006195 ORTHO05D007710 5.5e-139 498.4 380 60.5
AUR62014719 Chenopodium quinoa HOM05D006195 ORTHO05D007710 3.0e-137 492.7 359 68.0
CDE11G0466 Ceratophyllum demersum HOM05D006195 ORTHO05D007710 5.3e-134 481.9 362 63.3
Mapoly0082s0056 Marchantia polymorpha HOM05D006195 ORTHO05D007710 1.7e-132 476.9 421 54.9
AagrBONN_evm.TU.Sc2ySwM_344.4192 Anthoceros agrestis HOM05D006195 ORTHO05D007710 6.5e-132 474.9 372 59.7
AUR62016899 Chenopodium quinoa HOM05D006195 ORTHO05D007710 1.8e-126 456.8 381 59.8
unitig_37.g12337 Utricularia gibba HOM05D006195 ORTHO05D007710 2.1e-122 443.4 417 54.9
Nitab4.5_0000190g0110 Nicotiana tabacum HOM05D006195 ORTHO05D007710 1.5e-120 437.2 328 64.0
Hund23609 Selenicereus undatus HOM05D006195 ORTHO05D007710 8.2e-119 431.4 305 67.5
SMO137G0351 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 5.3e-118 428.7 358 56.7
MBI14_g13652_MAGBIO Magnolia biondii HOM05D006195 ORTHO05D007710 1.5e-117 427.2 384 56.5
Dinv40483 Davidia involucrata HOM05D006195 ORTHO05D007710 3.8e-116 422.5 289 69.6
CBR_g41455 Chara braunii HOM05D006195 ORTHO05D007710 5.0e-116 422.2 412 50.0
CBR_g20417 Chara braunii HOM05D006195 ORTHO05D007710 2.7e-114 416.4 432 47.9
Psat7g108560 Pisum sativum HOM05D006195 ORTHO05D007710 3.6e-114 416.0 299 67.2
Potri.004G034600 Populus trichocarpa HOM05D006195 ORTHO05D007710 3.7e-87 326.2 247 64.4
Eucgr.L01396 Eucalyptus grandis HOM05D006195 ORTHO05D007710 7.0e-86 322.0 232 64.2
SMO116G0485 Selaginella moellendorffii HOM05D006195 ORTHO05D007710 3.5e-85 319.7 279 55.9
Cre07.g326350 Chlamydomonas reinhardtii HOM05D006195 ORTHO05D007710 2.5e-83 313.5 403 43.2
HPP92_018057 Vanilla planifolia HOM05D006195 ORTHO05D007710 6.8e-81 305.4 307 52.1
TPR.G37128 Trifolium pratense HOM05D006195 ORTHO05D007710 2.4e-78 297.0 180 76.7
MCO07G204 Micromonas commoda HOM05D006195 ORTHO05D007710 3.9e-76 289.7 415 40.2
SalBow6G2099 Salvia bowleyana HOM05D006195 ORTHO05D007710 2.8e-74 283.5 168 76.8
SalBow6G4337 Salvia bowleyana HOM05D006195 ORTHO05D007710 2.8e-74 283.5 168 76.8
Nn1g03899 Nelumbo nucifera HOM05D006195 ORTHO05D007710 2.0e-72 277.3 469 39.4
SalBow1G5137 Salvia bowleyana HOM05D006195 ORTHO05D007710 6.4e-63 245.7 147 76.2
GSVIVG01003189001 Vitis vinifera HOM05D006195 ORTHO05D007710 5.2e-49 199.5 143 62.9
Manes.10G084901 Manihot esculenta HOM05D006195 ORTHO05D007710 3.4e-48 196.8 128 75.0
Dinv18994 Davidia involucrata HOM05D006195 ORTHO05D007710 4.2e-46 189.9 219 49.8
SalBow4G2205 Salvia bowleyana HOM05D006195 ORTHO05D007710 3.0e-44 183.7 99 81.8
PRCOL_00004057 Prasinoderma coloniale HOM05D006195 ORTHO05D007710 9.6e-43 178.7 294 37.1
AL117U10020 Arabidopsis lyrata HOM05D064442 ORTHO05D011622 5.3e-41 172.9 127 67.7
SalBow1G7985 Salvia bowleyana HOM05D006195 ORTHO05D007710 2.2e-39 167.5 115 69.6
SHI02125 Sapria himalayana HOM05D006195 ORTHO05D007710 3.5e-37 160.2 102 71.6
Thecc.06G199100 Theobroma cacao HOM05D006195 ORTHO05D007710 3.0e-36 157.1 101 68.3
Nitab4.5_0003834g0010 Nicotiana tabacum HOM05D006195 ORTHO05D007710 8.7e-36 155.6 87 77.0
CSS0050458 Camellia sinensis var. sinensis HOM05D000911 ORTHO05D007710 2.5e-35 154.1 89 73.0
SHI48938 Sapria himalayana HOM05D006195 ORTHO05D007710 1.1e-30 138.7 103 61.2
SEGI_17138 Sequoiadendron giganteum HOM05D006195 ORTHO05D007710 6.7e-28 129.4 80 68.8
HPP92_018063 Vanilla planifolia HOM05D006195 ORTHO05D007710 1.9e-22 111.3 156 41.7
SHI02124 Sapria himalayana HOM05D006195 ORTHO05D007710 6.3e-18 96.3 199 36.7
Migut.M00121 Erythranthe guttata HOM05D001610 ORTHO05D001585 3.4e-08 63.9 226 24.3
AUR62043984 Chenopodium quinoa HOM05D002999 ORTHO05D003137 3.8e-07 60.5 220 27.3
CSS0013325 Camellia sinensis var. sinensis HOM05D006195 ORTHO05D007710 1.9e-06 58.2 63 47.6
HanXRQChr09g0256871 Helianthus annuus HOM05D002999 ORTHO05D003137 1.9e-06 58.2 239 25.5
Pp3c2_19830 Physcomitrium patens HOM05D002999 ORTHO05D003137 1.9e-06 58.2 273 23.4
HanXRQChr00c0537g0575611 Helianthus annuus HOM05D002999 ORTHO05D003137 2.5e-06 57.8 239 25.1
Nitab4.5_0004238g0040 Nicotiana tabacum HOM05D002999 ORTHO05D003137 2.5e-06 57.8 225 24.9
Potri.014G136000 Populus trichocarpa HOM05D002999 ORTHO05D003137 2.5e-06 57.8 276 23.9
C03p85750 Brassica napus HOM05D003825 ORTHO05D004491 3.2e-06 57.4 207 25.1
BolC3t20866H Brassica oleracea HOM05D003825 ORTHO05D004491 3.2e-06 57.4 207 25.1
HanXRQChr15g0466521 Helianthus annuus HOM05D002999 ORTHO05D003137 3.2e-06 57.4 239 25.1
Sc18g0004560 Simmondsia chinensis HOM05D003825 ORTHO05D004491 3.2e-06 57.4 208 26.9
AagrBONN_evm.TU.Sc2ySwM_228.3731 Anthoceros agrestis HOM05D002999 ORTHO05D003137 4.2e-06 57.0 236 23.3
BolC1t00419H Brassica oleracea HOM05D003825 ORTHO05D004491 5.5e-06 56.6 206 25.2
BraA03t15368Z Brassica rapa HOM05D003825 ORTHO05D004491 5.5e-06 56.6 207 27.1
Pp3c10_3720 Physcomitrium patens HOM05D002999 ORTHO05D003137 5.5e-06 56.6 272 23.2
AagrBONN_evm.TU.Sc2ySwM_362.297 Anthoceros agrestis HOM05D002999 ORTHO05D003137 7.2e-06 56.2 252 24.6
Hma1.2p1_1375F.1_g279040 Hydrangea macrophylla HOM05D003825 ORTHO05D004491 7.2e-06 56.2 208 26.4
A03p62930 Brassica napus HOM05D003825 ORTHO05D004491 9.4e-06 55.8 207 26.6
C01p04290 Brassica napus HOM05D003825 ORTHO05D004491 9.4e-06 55.8 206 25.2
CARHR242280 Cardamine hirsuta HOM05D003825 ORTHO05D004491 9.4e-06 55.8 206 26.2


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