Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 2.0e-121 439.1 225 100.0
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 1.6e-102 376.3 233 89.3
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 1.5e-100 369.8 233 88.0
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 8.3e-99 364.0 227 86.3
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 3.3e-87 325.5 234 79.9
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 4.4e-60 235.3 234 61.1
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 2.9e-59 232.6 223 62.8
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 4.9e-59 231.9 218 63.3
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 7.1e-58 228.0 243 61.3
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 8.7e-56 221.1 234 58.5
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 3.6e-54 215.7 242 55.8
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 8.1e-54 214.5 250 54.0
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 2.8e-46 189.5 233 54.1
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.8e-32 143.7 239 43.9
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 2.3e-32 143.3 231 42.4
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 6.7e-32 141.7 239 43.5
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 1.1e-31 141.0 224 43.8
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.1e-31 141.0 239 43.5
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 8.2e-30 134.8 224 43.8
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 1.8e-29 133.7 239 43.1
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 2.6e-28 129.8 231 40.7
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 5.9e-28 128.6 250 40.0
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 7.7e-28 128.3 260 38.8
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 7.7e-28 128.3 253 39.9
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 7.7e-28 128.3 251 39.4
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 1.0e-27 127.9 263 39.2
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 1.3e-27 127.5 252 38.5
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 1.7e-27 127.1 265 40.0
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 1.7e-27 127.1 249 40.6
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 1.4e-26 124.0 253 37.9
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 2.5e-26 123.2 246 39.4
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 5.5e-26 122.1 262 37.8
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 2.1e-25 120.2 258 39.1
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 2.7e-25 119.8 239 40.2
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 2.7e-25 119.8 257 37.0
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 2.7e-25 119.8 243 41.6
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 6.1e-25 118.6 271 36.9
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 1.0e-24 117.9 255 38.0
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 1.0e-24 117.9 251 37.5
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 1.4e-24 117.5 266 38.3
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 1.4e-24 117.5 266 38.3
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 1.8e-24 117.1 258 36.4
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 3.9e-24 115.9 249 37.8
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 3.9e-24 115.9 250 38.8
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 5.1e-24 115.5 258 36.0
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 6.7e-24 115.2 240 37.1
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 6.7e-24 115.2 250 37.6
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 1.1e-23 114.4 229 38.9
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.5e-23 114.0 246 37.8
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 4.3e-23 112.5 230 38.3
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 5.7e-23 112.1 253 38.7
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 1.3e-22 110.9 240 36.2
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 2.2e-22 110.2 236 39.8
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 2.2e-22 110.2 234 37.6
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 2.8e-22 109.8 261 36.8
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 2.8e-22 109.8 226 39.8
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 8.2e-22 108.2 253 37.9
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.4e-21 107.5 270 35.9
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.4e-21 107.5 217 40.6
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 3.1e-21 106.3 234 38.9
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 5.3e-21 105.5 285 35.4
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 9.1e-21 104.8 221 39.8
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 9.1e-21 104.8 226 37.6
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 1.5e-20 104.0 267 33.3
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 2.6e-20 103.2 232 38.8
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 2.6e-20 103.2 237 38.0
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 3.4e-20 102.8 240 37.5
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 1.0e-19 101.3 244 38.5
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 1.0e-19 101.3 291 30.6
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 1.0e-19 101.3 250 35.6
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 1.7e-19 100.5 236 36.9
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.2e-19 100.1 270 32.6
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 5.0e-19 99.0 202 40.6
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 6.5e-19 98.6 234 37.6
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 1.1e-18 97.8 138 43.5
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 1.4e-18 97.4 270 34.8
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.4e-18 97.4 270 34.8
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.4e-18 97.4 270 32.6
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 1.9e-18 97.1 267 35.2
AT4G05018 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 1.9e-18 97.1 156 44.2
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 5.5e-18 95.5 142 43.7
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 7.2e-18 95.1 279 33.3
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.2e-17 94.4 275 32.7
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 1.6e-17 94.0 239 36.8
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 2.1e-17 93.6 270 33.3
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 6.1e-17 92.0 269 31.6
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.0e-16 91.3 129 47.3
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 2.3e-16 90.1 186 35.5
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 3.0e-16 89.7 223 34.1
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 3.0e-16 89.7 253 32.8
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 3.9e-16 89.4 127 45.7
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 5.1e-16 89.0 226 35.0
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 5.1e-16 89.0 226 35.0
AL6G48620 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 6.7e-16 88.6 138 45.7
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 8.8e-16 88.2 234 35.5
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 1.1e-15 87.8 252 34.1
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.1e-15 87.8 128 45.3
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 1.1e-15 87.8 223 33.6
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 1.5e-15 87.4 138 47.1
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 2.6e-15 86.7 138 40.6
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 5.7e-15 85.5 273 29.7
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 7.4e-15 85.1 147 41.5
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 2.2e-14 83.6 272 32.0
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 3.7e-14 82.8 271 31.0
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 6.3e-14 82.0 131 44.3
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 2.4e-13 80.1 235 34.5
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 3.1e-13 79.7 259 30.1
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 3.5e-12 76.3 125 40.8
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 5.9e-12 75.5 192 32.8
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 2.2e-11 73.6 204 33.3
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 9.4e-10 68.2 268 30.6
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 1.2e-09 67.8 133 38.3
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 6.1e-09 65.5 183 33.3
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 1.8e-08 63.9 170 32.9
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 2.8e-06 56.6 125 36.0


User provided reference genes

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