Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p12110 Brassica napus HOM05D010395 ORTHO05D012583 1.3e-70 269.6 140 100.0
BraA01t01154Z Brassica rapa HOM05D010395 ORTHO05D012583 1.3e-70 269.6 140 100.0
BolC1t01399H Brassica oleracea HOM05D010395 ORTHO05D012583 2.2e-57 225.7 140 85.0
C01p14420 Brassica napus HOM05D010395 ORTHO05D012583 3.0e-54 215.3 140 82.9
C07p50890 Brassica napus HOM05D010395 ORTHO05D012583 2.7e-39 165.6 140 67.1
BolC7t45587H Brassica oleracea HOM05D010395 ORTHO05D012583 2.7e-39 165.6 140 67.1
Sp7g18780 Schrenkiella parvula HOM05D010395 ORTHO05D012583 2.7e-39 165.6 139 65.5
A03p52430 Brassica napus HOM05D010395 ORTHO05D012583 1.0e-38 163.7 140 65.7
BraA03t14322Z Brassica rapa HOM05D010395 ORTHO05D012583 3.0e-38 162.2 140 64.3
AL7G33470 Arabidopsis lyrata HOM05D010395 ORTHO05D012583 1.2e-34 150.2 145 62.8
BcaC01g00670 Brassica carinata HOM05D010395 ORTHO05D012583 1.5e-34 149.8 141 64.5
C03p82940 Brassica napus HOM05D010395 ORTHO05D012583 1.5e-34 149.8 141 64.5
BolC3t20577H Brassica oleracea HOM05D010395 ORTHO05D012583 1.5e-34 149.8 141 64.5
A08p14880 Brassica napus HOM05D010395 ORTHO05D012583 1.7e-33 146.4 140 61.4
BraA08t33471Z Brassica rapa HOM05D010395 ORTHO05D012583 1.7e-33 146.4 140 61.4
AL7G33450 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 4.9e-33 144.8 145 61.4
BcaB03g11673 Brassica carinata HOM05D010395 ORTHO05D012583 8.4e-33 144.1 140 64.3
AT4G20420 Arabidopsis thaliana HOM05D010395 ORTHO05D012583 1.2e-31 140.2 145 59.3
Carub.0007s2074 Capsella rubella HOM05D010395 ORTHO05D012583 2.7e-31 139.0 143 58.7
CARHR227250 Cardamine hirsuta HOM05D010395 ORTHO05D012583 7.9e-31 137.5 146 60.3
Thhalv10026545m.g Eutrema salsugineum HOM05D010395 ORTHO05D012583 5.8e-26 121.3 138 53.6
BcaC06g31608 Brassica carinata HOM05D009819 ORTHO05D011938 1.5e-13 80.1 138 46.4
CARHR178570 Cardamine hirsuta HOM05D009819 ORTHO05D011938 1.5e-13 80.1 134 47.0
Thhalv10001188m.g Eutrema salsugineum HOM05D009819 ORTHO05D011938 4.3e-13 78.6 134 44.8
BcaNung05679 Brassica carinata HOM05D010395 ORTHO05D012583 2.1e-12 76.3 53 73.6
Carub.0008s0396 Capsella rubella HOM05D009819 ORTHO05D011938 1.1e-11 73.9 91 51.6
Sp2g09330 Schrenkiella parvula HOM05D009819 ORTHO05D011938 5.3e-11 71.6 113 45.1
AT5G44540 Arabidopsis thaliana HOM05D009819 ORTHO05D011938 2.0e-10 69.7 136 42.6
A06p47110 Brassica napus HOM05D009819 ORTHO05D011938 2.0e-10 69.7 138 43.5
BraA06t27583Z Brassica rapa HOM05D009819 ORTHO05D011938 2.0e-10 69.7 138 43.5
A09p21160 Brassica napus HOM05D009819 ORTHO05D011938 2.6e-10 69.3 136 43.4
BraA09t37722Z Brassica rapa HOM05D009819 ORTHO05D011938 2.6e-10 69.3 136 43.4
C07p27410 Brassica napus HOM05D009819 ORTHO05D011938 3.4e-10 68.9 137 44.5
BolC7t43271H Brassica oleracea HOM05D009819 ORTHO05D011938 3.4e-10 68.9 137 44.5
BcaC06g34541 Brassica carinata HOM05D009819 ORTHO05D011938 7.6e-10 67.8 137 43.8
BolC2t10545H Brassica oleracea HOM05D009819 ORTHO05D011938 1.0e-09 67.4 94 46.8
BcaB07g30520 Brassica carinata HOM05D009819 ORTHO05D011938 2.9e-09 65.9 138 42.0
A02p28450 Brassica napus HOM05D009819 ORTHO05D011938 1.4e-08 63.5 137 39.4
BraA02t07880Z Brassica rapa HOM05D009819 ORTHO05D011938 1.4e-08 63.5 137 39.4
THA.LOC104812932 Tarenaya hassleriana HOM05D009819 ORTHO05D011938 3.2e-08 62.4 139 42.4
BcaB07g30942 Brassica carinata HOM05D009819 ORTHO05D011938 1.2e-07 60.5 93 48.4
BcaC04g21826 Brassica carinata HOM05D009819 ORTHO05D011938 6.1e-07 58.2 136 39.0
C09p26990 Brassica napus HOM05D009819 ORTHO05D011938 6.1e-07 58.2 136 39.0
BolC9t55582H Brassica oleracea HOM05D009819 ORTHO05D011938 6.1e-07 58.2 136 39.0


User provided reference genes

Program Settings