Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p11220 Brassica napus HOM05D007367 ORTHO05D008866 1.5e-95 352.8 181 100.0
BraA01t01068Z Brassica rapa HOM05D007367 ORTHO05D008866 5.5e-93 344.4 181 97.2
BcaC09g51422 Brassica carinata HOM05D007367 ORTHO05D008866 4.3e-90 334.7 181 93.9
BolC1t01302H Brassica oleracea HOM05D007367 ORTHO05D008866 2.8e-89 332.0 181 92.8
C01p13270 Brassica napus HOM05D007367 ORTHO05D008866 6.1e-84 314.3 171 94.2
BcaNung01789 Brassica carinata HOM05D007367 ORTHO05D008866 2.2e-73 279.3 181 79.6
Sp7g17960 Schrenkiella parvula HOM05D007367 ORTHO05D008866 4.2e-69 265.0 181 76.8
CARHR226150 Cardamine hirsuta HOM05D007367 ORTHO05D008866 1.3e-65 253.4 181 72.9
Carub.0007s2188 Capsella rubella HOM05D007367 ORTHO05D008866 1.1e-61 240.4 181 68.5
AL7G34810 Arabidopsis lyrata HOM05D007367 ORTHO05D008866 3.0e-59 232.3 181 64.6
AT4G19350 Arabidopsis thaliana HOM05D007367 ORTHO05D008866 4.4e-58 228.4 181 63.5
Aa31LG6G1950 Aethionema arabicum HOM05D007367 ORTHO05D008866 5.5e-53 211.5 182 63.7
THA.LOC104811080 Tarenaya hassleriana HOM05D007367 ORTHO05D008866 3.6e-52 208.8 178 60.1
Thhalv10026808m.g Eutrema salsugineum HOM05D007367 ORTHO05D008866 1.8e-40 169.9 111 79.3
COL.COLO4_16748 Corchorus olitorius HOM05D007367 ORTHO05D008866 3.9e-38 162.2 161 51.6
Gohir.D12G204000 Gossypium hirsutum HOM05D007367 ORTHO05D008866 1.9e-37 159.8 159 53.5
Thecc.03G320300 Theobroma cacao HOM05D007367 ORTHO05D008866 3.3e-37 159.1 161 52.8
Ciclev10012881m.g Citrus clementina HOM05D007367 ORTHO05D008866 6.1e-36 154.8 172 49.4
Gohir.A12G201200 Gossypium hirsutum HOM05D007367 ORTHO05D008866 1.4e-35 153.7 159 51.6
Duzib068G0439 Durio zibethinus HOM05D007367 ORTHO05D008866 4.0e-35 152.1 159 52.8
ClCG07G011120 Citrullus lanatus HOM05D007367 ORTHO05D008866 6.8e-35 151.4 169 50.3
Sc07g0008020 Simmondsia chinensis HOM05D007367 ORTHO05D008866 6.8e-35 151.4 170 45.9
MELO3C016218.2 Cucumis melo HOM05D007367 ORTHO05D008866 8.9e-35 151.0 166 50.0
Gorai.008G218800 Gossypium raimondii HOM05D007367 ORTHO05D008866 8.9e-35 151.0 152 52.6
RcHm_v2.0_Chr7g0215331 Rosa chinensis HOM05D007367 ORTHO05D008866 4.4e-34 148.7 162 49.4
Actinidia32792 Actinidia chinensis HOM05D007367 ORTHO05D008866 1.3e-33 147.1 161 48.4
MD03G1130300 Malus domestica HOM05D007367 ORTHO05D008866 3.7e-33 145.6 159 46.5
TWI38G2056 Tripterygium wilfordii HOM05D007367 ORTHO05D008866 3.7e-33 145.6 170 50.6
CiPaw.11G074200 Carya illinoinensis HOM05D007367 ORTHO05D008866 6.4e-33 144.8 169 47.3
QL93p0143_0020 Quercus lobata HOM05D007367 ORTHO05D008866 6.4e-33 144.8 159 47.2
Manes.10G067900 Manihot esculenta HOM05D007367 ORTHO05D008866 8.3e-33 144.4 166 47.6
Sed0007825 Sechium edule HOM05D007367 ORTHO05D008866 8.3e-33 144.4 163 49.7
Cfa012305 Carpinus fangiana HOM05D007367 ORTHO05D008866 1.4e-32 143.7 159 49.7
EL10Ac8g19394 Beta vulgaris HOM05D007367 ORTHO05D008866 1.9e-32 143.3 175 42.9
Potri.004G235300 Populus trichocarpa HOM05D007367 ORTHO05D008866 1.9e-32 143.3 158 46.8
QL12p003620 Quercus lobata HOM05D007367 ORTHO05D008866 1.9e-32 143.3 159 46.5
Prupe.5G013300 Prunus persica HOM05D007367 ORTHO05D008866 2.4e-32 142.9 159 45.9
CsaV3_4G007130 Cucumis sativus L. HOM05D007367 ORTHO05D008866 4.1e-32 142.1 160 49.4
SalBow4G0967 Salvia bowleyana HOM05D007367 ORTHO05D008866 5.4e-32 141.7 164 46.3
FvH4_5g25140 Fragaria vesca HOM05D007367 ORTHO05D008866 9.2e-32 141.0 159 47.2
SGA_v2.0_scaffold89G27372 Striga asiatica HOM05D007367 ORTHO05D008866 1.2e-31 140.6 160 46.9
ECA246G3716 Erigeron canadensis HOM05D007367 ORTHO05D008866 2.0e-31 139.8 163 42.9
Dinv37431 Davidia involucrata HOM05D007367 ORTHO05D008866 2.7e-31 139.4 158 49.4
Medtr8g075140 Medicago truncatula HOM05D007367 ORTHO05D008866 2.7e-31 139.4 154 47.4
FAN13G0070 Fragaria x ananassa HOM05D007367 ORTHO05D008866 3.5e-31 139.0 159 46.5
Lsat_1_v5_gn_5_43721 Lactuca sativa HOM05D007367 ORTHO05D008866 4.6e-31 138.7 163 46.0
TWI38G0281 Tripterygium wilfordii HOM05D007367 ORTHO05D008866 4.6e-31 138.7 159 47.8
GSVIVG01036886001 Vitis vinifera HOM05D007367 ORTHO05D008866 4.6e-31 138.7 163 46.6
HanXRQChr02g0034081 Helianthus annuus HOM05D007367 ORTHO05D008866 1.3e-30 137.1 152 44.7
CANSAT01G1692 Cannabis sativa HOM05D007367 ORTHO05D008866 3.0e-30 136.0 159 46.5
FAN08G2564 Fragaria x ananassa HOM05D007367 ORTHO05D008866 3.0e-30 136.0 159 45.9
Glyma.16G123600 Glycine max HOM05D007367 ORTHO05D008866 3.0e-30 136.0 158 46.8
Lalb_Chr16g0391641 Lupinus albus HOM05D007367 ORTHO05D008866 3.9e-30 135.6 164 43.9
Nn1g01985 Nelumbo nucifera HOM05D007367 ORTHO05D008866 6.6e-30 134.8 160 46.2
arahy.Tifrunner.gnm1.ann1.H9MF1T Arachis hypogaea HOM05D007367 ORTHO05D008866 3.3e-29 132.5 164 44.5
Migut.A00520 Erythranthe guttata HOM05D007367 ORTHO05D008866 3.3e-29 132.5 158 43.0
Glyma.02G045600 Glycine max HOM05D007367 ORTHO05D008866 3.3e-29 132.5 154 45.5
Cc08_g05930 Coffea canephora HOM05D007367 ORTHO05D008866 1.6e-28 130.2 166 43.4
Lj4g0011102 Lotus japonicus HOM05D007367 ORTHO05D008866 2.1e-28 129.8 163 44.2
Sopen12g032050 Solanum pennellii HOM05D007367 ORTHO05D008866 2.1e-28 129.8 168 42.3
MSTRG.25748 Avicennia marina HOM05D007367 ORTHO05D008866 3.6e-28 129.0 164 42.7
Solyc12g096170.2 Solanum lycopersicum HOM05D007367 ORTHO05D008866 3.6e-28 129.0 168 41.7
TPR.G19504 Trifolium pratense HOM05D007367 ORTHO05D008866 3.6e-28 129.0 154 42.9
VMungo0251G1728 Vigna mungo HOM05D007367 ORTHO05D008866 3.6e-28 129.0 152 44.1
CDE02G0575 Ceratophyllum demersum HOM05D007367 ORTHO05D008866 1.8e-27 126.7 149 45.6
Sabra01G0179900 Salix brachista HOM05D000929 ORTHO05D004813 8.9e-27 124.4 158 42.4
PSO063G4690 Papaver somniferum HOM05D007367 ORTHO05D008866 2.0e-26 123.2 152 45.4
TAR374G1177 Trochodendron aralioides HOM05D007367 ORTHO05D008866 2.0e-26 123.2 156 44.2
Peaxi162Scf00876g00431 Petunia axillaris HOM05D007367 ORTHO05D008866 2.6e-26 122.9 176 41.5
Aqoxy7G01946 Aquilegia oxysepala HOM05D000773 ORTHO05D008866 3.4e-26 122.5 166 39.2
CAN.G947.33 Capsicum annuum HOM05D007367 ORTHO05D008866 5.8e-26 121.7 168 39.9
Os08g0162500 Oryza sativa ssp. japonica HOM05D007367 ORTHO05D008866 2.9e-25 119.4 135 46.7
Psat4g102200 Pisum sativum HOM05D007367 ORTHO05D008866 3.7e-25 119.0 159 41.5
PGR042G2818 Punica granatum HOM05D007367 ORTHO05D008866 4.9e-25 118.6 165 43.0
arahy.Tifrunner.gnm1.ann1.I4PABW Arachis hypogaea HOM05D007367 ORTHO05D008866 6.4e-25 118.2 192 38.5
Phvul.003G266000 Phaseolus vulgaris HOM05D007367 ORTHO05D008866 8.3e-25 117.9 169 40.2
FAN18G1407 Fragaria x ananassa HOM05D007367 ORTHO05D008866 1.2e-23 114.0 159 40.9
Atru.chr8.2637 Acer truncatum HOM05D007367 ORTHO05D008866 1.0e-22 110.9 157 39.5
FAN04G0859 Fragaria x ananassa HOM05D007367 ORTHO05D008866 1.3e-22 110.5 159 40.3
Zm00001eb415480 Zea mays HOM05D007367 ORTHO05D008866 3.0e-22 109.4 159 38.4
Ah.09g231810 Amaranthus hybridus HOM05D007367 ORTHO05D008866 5.1e-22 108.6 171 38.0
PSO675G5685 Papaver somniferum HOM05D007367 ORTHO05D008866 8.6e-22 107.8 118 46.6
unitig_748.g8147 Utricularia gibba HOM05D007367 ORTHO05D008866 1.1e-21 107.5 173 35.8
HPP92_022724 Vanilla planifolia HOM05D007367 ORTHO05D008866 2.5e-21 106.3 150 40.7
Hund14309 Selenicereus undatus HOM05D007367 ORTHO05D008866 3.3e-21 105.9 180 38.3
PGSC0003DMG400029288 Solanum tuberosum HOM05D007367 ORTHO05D008866 1.2e-20 104.0 181 35.9
AUR62030407 Chenopodium quinoa HOM05D007367 ORTHO05D008866 3.6e-20 102.4 177 36.7
vmacro00097 Vaccinium macrocarpon HOM05D007367 ORTHO05D008866 8.1e-20 101.3 226 31.4
CDE11G0580 Ceratophyllum demersum HOM05D007367 ORTHO05D008866 8.3e-17 91.3 114 45.6
DCAR_002187 Daucus carota HOM05D007367 ORTHO05D008866 1.9e-16 90.1 104 49.0
Eucgr.E01150 Eucalyptus grandis HOM05D007367 ORTHO05D008866 5.1e-14 82.0 84 48.8
Thecc.04G178000 Theobroma cacao HOM05D000090 ORTHO05D001322 6.6e-14 81.6 79 54.4
Oeu046776.1 Olea europaea HOM05D007367 ORTHO05D008866 1.5e-13 80.5 90 46.7
Haze_08425 Corylus avellana HOM05D007367 ORTHO05D008866 1.6e-12 77.0 90 48.9
Nitab4.5_0011129g0040 Nicotiana tabacum HOM05D007367 ORTHO05D008866 8.1e-12 74.7 131 35.9
Cpa.g.sc103.6 Carica papaya HOM05D007367 ORTHO05D008866 4.0e-11 72.4 71 53.5
Pp3c23_7640 Physcomitrium patens HOM05D007367 ORTHO05D008866 9.9e-10 67.8 161 27.3
SHI32769 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-08 64.3 51 62.7
Actinidia01248 Actinidia chinensis HOM05D007367 ORTHO05D008866 1.9e-08 63.5 84 46.4
Oeu046774.1 Olea europaea HOM05D007367 ORTHO05D008866 3.0e-06 56.2 54 50.0
Nitab4.5_0001913g0180 Nicotiana tabacum HOM05D007367 ORTHO05D008866 8.7e-06 54.7 107 31.8


User provided reference genes

Program Settings