Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p10720 Brassica napus HOM05D000828 ORTHO05D000623 8.3e-70 266.9 136 100.0
C01p12670 Brassica napus HOM05D000828 ORTHO05D000623 1.8e-40 169.5 168 61.3
BolC1t01244H Brassica oleracea HOM05D000828 ORTHO05D000623 1.8e-40 169.5 168 61.3
BraA01t01018Z Brassica rapa HOM05D000828 ORTHO05D000623 3.1e-24 115.5 55 100.0
BcaC09g51466 Brassica carinata HOM05D000828 ORTHO05D000623 1.1e-18 97.1 56 92.9
BcaNung02667 Brassica carinata HOM05D000828 ORTHO05D000623 2.2e-17 92.8 238 31.1
C07p49910 Brassica napus HOM05D000828 ORTHO05D000623 2.2e-17 92.8 238 31.1
BolC7t45493H Brassica oleracea HOM05D000828 ORTHO05D000623 2.2e-17 92.8 238 31.1
BraA03t14231Z Brassica rapa HOM05D000828 ORTHO05D000623 2.2e-17 92.8 238 31.1
A08p13940 Brassica napus HOM05D000828 ORTHO05D000623 6.9e-16 87.8 238 31.5
BraA08t33382Z Brassica rapa HOM05D000828 ORTHO05D000623 6.9e-16 87.8 238 31.5
BcaC01g00557 Brassica carinata HOM05D000828 ORTHO05D000623 3.4e-15 85.5 238 31.9
BolC3t20410H Brassica oleracea HOM05D000828 ORTHO05D000623 3.4e-15 85.5 238 31.9
A03p51470 Brassica napus HOM05D000828 ORTHO05D000623 5.9e-15 84.7 129 42.6
CARHR225540 Cardamine hirsuta HOM05D000828 ORTHO05D000623 1.7e-14 83.2 227 32.6
A03p51480 Brassica napus HOM05D000828 ORTHO05D000623 2.9e-14 82.4 78 55.1
Thhalv10025925m.g Eutrema salsugineum HOM05D000828 ORTHO05D000623 1.1e-13 80.5 237 29.1
C03p81420 Brassica napus HOM05D000828 ORTHO05D000623 2.5e-13 79.3 265 29.4
AL7G35560 Arabidopsis lyrata HOM05D000828 ORTHO05D000623 1.6e-12 76.6 235 29.4
Thhalv10027258m.g Eutrema salsugineum HOM05D000828 ORTHO05D000623 1.6e-12 76.6 71 54.9
AT4G18690 Arabidopsis thaliana HOM05D000828 ORTHO05D000623 2.0e-10 69.7 77 49.4
Carub.0007s2254 Capsella rubella HOM05D000828 ORTHO05D000623 5.7e-10 68.2 77 48.1
AL7G35570 Arabidopsis lyrata HOM05D000828 ORTHO05D000623 3.7e-09 65.5 72 54.2
AT4G18680 Arabidopsis thaliana HOM05D000828 ORTHO05D000623 1.4e-08 63.5 62 56.5
Aa31LG9G7230 Aethionema arabicum HOM05D000828 ORTHO05D000623 5.3e-08 61.6 75 45.3
BcaNung05500 Brassica carinata HOM05D000828 ORTHO05D000623 7.0e-08 61.2 79 49.4
CARHR225520 Cardamine hirsuta HOM05D000828 ORTHO05D000623 7.0e-08 61.2 77 44.2
BcaC06g34393 Brassica carinata HOM05D000828 ORTHO05D000623 2.6e-07 59.3 76 44.7
Thhalv10001138m.g Eutrema salsugineum HOM05D000828 ORTHO05D000623 3.4e-07 58.9 77 42.9
Carub.0007s2256 Capsella rubella HOM05D000828 ORTHO05D000623 4.5e-07 58.5 67 50.7
Sp7g17400 Schrenkiella parvula HOM05D000828 ORTHO05D000623 4.5e-07 58.5 77 44.2
CARHR176140 Cardamine hirsuta HOM05D000828 ORTHO05D000623 1.3e-06 57.0 77 42.9
CARHR225550 Cardamine hirsuta HOM05D000828 ORTHO05D000623 1.3e-06 57.0 67 44.8
A01p10700 Brassica napus HOM05D000828 ORTHO05D000623 2.2e-06 56.2 79 44.3
BolC9t55681H Brassica oleracea HOM05D000828 ORTHO05D000623 2.2e-06 56.2 75 42.7
BraA01t01016Z Brassica rapa HOM05D000828 ORTHO05D000623 2.2e-06 56.2 79 44.3
Thhalv10027005m.g Eutrema salsugineum HOM05D000828 ORTHO05D000623 2.2e-06 56.2 67 47.8
Sp2g10750 Schrenkiella parvula HOM05D000828 ORTHO05D000623 2.2e-06 56.2 77 42.9
BcaC04g21743 Brassica carinata HOM05D000828 ORTHO05D000623 3.8e-06 55.5 71 43.7
A09p21950 Brassica napus HOM05D000828 ORTHO05D000623 3.8e-06 55.5 71 43.7
C09p28110 Brassica napus HOM05D000828 ORTHO05D000623 3.8e-06 55.5 71 43.7
BraA09t37802Z Brassica rapa HOM05D000828 ORTHO05D000623 3.8e-06 55.5 71 43.7
Carub.0008s0213 Capsella rubella HOM05D000828 ORTHO05D000623 3.8e-06 55.5 77 40.3
BolC1t01242H Brassica oleracea HOM05D000828 ORTHO05D000623 5.0e-06 55.1 79 44.3
AT4G18660 Arabidopsis thaliana HOM05D000828 ORTHO05D000623 8.5e-06 54.3 71 42.3
BcaB07g30867 Brassica carinata HOM05D000828 ORTHO05D000623 8.5e-06 54.3 71 42.3
BcaC06g31511 Brassica carinata HOM05D000828 ORTHO05D000623 8.5e-06 54.3 77 41.6
C07p29120 Brassica napus HOM05D000828 ORTHO05D000623 8.5e-06 54.3 77 41.6
BolC7t43454H Brassica oleracea HOM05D000828 ORTHO05D000623 8.5e-06 54.3 77 41.6
BraA06t27494Z Brassica rapa HOM05D000828 ORTHO05D000623 8.5e-06 54.3 77 41.6


User provided reference genes

Program Settings