Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p10000 Brassica napus HOM05D004587 ORTHO05D005512 2.2e-85 318.9 160 100.0
BraA01t00944Z Brassica rapa HOM05D004587 ORTHO05D005512 1.1e-84 316.6 160 99.4
C01p11800 Brassica napus HOM05D004587 ORTHO05D005512 3.5e-83 311.6 160 98.1
BcaC09g51581 Brassica carinata HOM05D004587 ORTHO05D005512 2.9e-82 308.5 160 97.5
BolC1t01142H Brassica oleracea HOM05D004587 ORTHO05D005512 8.6e-82 307.0 160 96.9
BcaNung00040 Brassica carinata HOM05D004587 ORTHO05D005512 7.0e-76 287.3 166 90.4
Thhalv10027517m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 1.4e-71 273.1 161 87.6
Sp7g16150 Schrenkiella parvula HOM05D004587 ORTHO05D005512 4.1e-68 261.5 162 86.4
CARHR224700 Cardamine hirsuta HOM05D004587 ORTHO05D005512 4.7e-64 248.1 162 80.2
AL7G36550 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 8.0e-64 247.3 161 80.7
AT4G17960 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 3.1e-63 245.4 161 80.1
Carub.0007s2338 Capsella rubella HOM05D004587 ORTHO05D005512 1.2e-62 243.4 165 77.6
THA.LOC104812836 Tarenaya hassleriana HOM05D004587 ORTHO05D005512 7.3e-49 197.6 170 65.9
AL8G11720 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 1.2e-43 180.3 158 64.6
Sp2g11450 Schrenkiella parvula HOM05D004587 ORTHO05D005512 1.2e-43 180.3 155 63.9
Thhalv10001062m.g Eutrema salsugineum HOM05D004587 ORTHO05D005512 7.8e-43 177.6 155 61.9
Carub.0008s0129 Capsella rubella HOM05D004587 ORTHO05D005512 1.0e-42 177.2 156 62.8
C02p47640 Brassica napus HOM05D004587 ORTHO05D005512 3.9e-42 175.3 155 62.6
BolC2t10800H Brassica oleracea HOM05D004587 ORTHO05D005512 3.9e-42 175.3 155 62.6
A02p30170 Brassica napus HOM05D004587 ORTHO05D005512 6.6e-42 174.5 156 62.8
Aa31LG6G710 Aethionema arabicum HOM05D004587 ORTHO05D005512 8.7e-42 174.1 160 62.5
BraA02t08033Z Brassica rapa HOM05D004587 ORTHO05D005512 1.9e-41 172.9 156 62.2
CARHR174890 Cardamine hirsuta HOM05D004587 ORTHO05D005512 3.3e-41 172.2 157 63.1
BcaC06g31462 Brassica carinata HOM05D004587 ORTHO05D005512 6.2e-40 167.9 147 61.9
BolC7t43533H Brassica oleracea HOM05D004587 ORTHO05D005512 8.1e-40 167.5 152 60.5
BcaC06g34365 Brassica carinata HOM05D004587 ORTHO05D005512 2.4e-39 166.0 152 59.9
C07p29850 Brassica napus HOM05D004587 ORTHO05D005512 2.4e-39 166.0 152 59.9
CiPaw.11G092100 Carya illinoinensis HOM05D004587 ORTHO05D005512 1.2e-38 163.7 158 54.4
Potri.001G143600 Populus trichocarpa HOM05D004587 ORTHO05D005512 3.4e-38 162.2 164 51.2
A06p45800 Brassica napus HOM05D004587 ORTHO05D005512 9.9e-38 160.6 149 60.4
BraA06t27449Z Brassica rapa HOM05D004587 ORTHO05D005512 3.8e-37 158.7 147 59.9
CiPaw.12G062400 Carya illinoinensis HOM05D004587 ORTHO05D005512 8.4e-37 157.5 159 52.2
TWI81G0220 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 1.4e-36 156.8 160 53.8
Duzib068G1306 Durio zibethinus HOM05D004587 ORTHO05D005512 1.9e-36 156.4 161 50.9
Prupe.5G039100 Prunus persica HOM05D004587 ORTHO05D005512 9.3e-36 154.1 159 52.8
PGR042G1036 Punica granatum HOM05D004587 ORTHO05D005512 1.6e-35 153.3 156 48.1
BcaC03g16867 Brassica carinata HOM05D004587 ORTHO05D005512 3.5e-35 152.1 119 68.9
Atru.chr6.1737 Acer truncatum HOM05D004587 ORTHO05D005512 7.8e-35 151.0 158 50.6
CsaV3_3G049300 Cucumis sativus L. HOM05D004587 ORTHO05D005512 7.8e-35 151.0 163 49.1
AT5G46620 Arabidopsis thaliana HOM05D004587 ORTHO05D005512 1.0e-34 150.6 159 57.2
Aa31LG9G6270 Aethionema arabicum HOM05D004587 ORTHO05D005512 3.0e-34 149.1 153 54.9
Manes.17G011700 Manihot esculenta HOM05D004587 ORTHO05D005512 3.0e-34 149.1 168 50.6
ClCG09G012070 Citrullus lanatus HOM05D004587 ORTHO05D005512 3.9e-34 148.7 163 49.7
Potri.003G090600 Populus trichocarpa HOM05D004587 ORTHO05D005512 3.9e-34 148.7 161 50.3
Thecc.03G229700 Theobroma cacao HOM05D004587 ORTHO05D005512 3.9e-34 148.7 162 48.1
Dinv28943 Davidia involucrata HOM05D004587 ORTHO05D005512 6.6e-34 147.9 156 49.4
MELO3C003396.2 Cucumis melo HOM05D004587 ORTHO05D005512 8.7e-34 147.5 163 48.5
TWI60G1364 Tripterygium wilfordii HOM05D004587 ORTHO05D005512 1.9e-33 146.4 159 51.6
Sed0004713 Sechium edule HOM05D004587 ORTHO05D005512 5.6e-33 144.8 162 49.4
Oeu035388.1 Olea europaea HOM05D004587 ORTHO05D005512 9.6e-33 144.1 156 48.7
CANSAT21G0306 Cannabis sativa HOM05D004587 ORTHO05D005512 1.3e-32 143.7 165 46.7
Dinv25204 Davidia involucrata HOM05D004587 ORTHO05D005512 1.3e-32 143.7 158 50.0
arahy.Tifrunner.gnm1.ann1.QWZQ79 Arachis hypogaea HOM05D004587 ORTHO05D005512 1.6e-32 143.3 160 46.2
arahy.Tifrunner.gnm1.ann1.VNVR7L Arachis hypogaea HOM05D004587 ORTHO05D005512 1.6e-32 143.3 160 46.2
Gohir.D08G177900 Gossypium hirsutum HOM05D004587 ORTHO05D005512 3.6e-32 142.1 164 48.2
TAR629G0873 Trochodendron aralioides HOM05D004587 ORTHO05D005512 6.2e-32 141.4 163 49.1
Gorai.004G186100 Gossypium raimondii HOM05D004587 ORTHO05D005512 1.1e-31 140.6 164 47.6
Gohir.A08G157600 Gossypium hirsutum HOM05D004587 ORTHO05D005512 1.8e-31 139.8 164 47.6
Sed0024230 Sechium edule HOM05D004587 ORTHO05D005512 3.1e-31 139.0 168 48.2
FAN08G2253 Fragaria x ananassa HOM05D004587 ORTHO05D005512 5.3e-31 138.3 159 47.8
RcHm_v2.0_Chr7g0209351 Rosa chinensis HOM05D004587 ORTHO05D005512 5.3e-31 138.3 158 46.8
Hma1.2p1_0991F.1_g245040 Hydrangea macrophylla HOM05D004587 ORTHO05D005512 6.9e-31 137.9 162 49.4
MD06G1032800 Malus domestica HOM05D004587 ORTHO05D005512 6.9e-31 137.9 158 48.1
COL.COLO4_17061 Corchorus olitorius HOM05D004587 ORTHO05D005512 9.0e-31 137.5 193 41.5
FAN04G0466 Fragaria x ananassa HOM05D004587 ORTHO05D005512 1.2e-30 137.1 155 47.7
Actinidia09217 Actinidia chinensis HOM05D004587 ORTHO05D005512 2.0e-30 136.3 161 47.8
Nitab4.5_0001285g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 2.0e-30 136.3 156 46.2
Nn6g33612 Nelumbo nucifera HOM05D004587 ORTHO05D005512 2.6e-30 136.0 160 50.0
CSS0021945 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 4.5e-30 135.2 158 48.1
CSS0032807 Camellia sinensis var. sinensis HOM05D004587 ORTHO05D005512 4.5e-30 135.2 158 48.1
FAN18G4447 Fragaria x ananassa HOM05D004587 ORTHO05D005512 4.5e-30 135.2 155 48.4
Eucgr.E00288 Eucalyptus grandis HOM05D004587 ORTHO05D005512 5.8e-30 134.8 169 44.4
Lalb_Chr16g0379161 Lupinus albus HOM05D004587 ORTHO05D005512 5.8e-30 134.8 161 49.1
PGSC0003DMG400017533 Solanum tuberosum HOM05D004587 ORTHO05D005512 5.8e-30 134.8 159 45.9
Actinidia14814 Actinidia chinensis HOM05D004587 ORTHO05D005512 9.9e-30 134.0 158 48.1
Psat2g173440 Pisum sativum HOM05D004587 ORTHO05D005512 9.9e-30 134.0 161 45.3
FvH4_5g21840 Fragaria vesca HOM05D004587 ORTHO05D005512 1.7e-29 133.3 155 47.1
Sc22g0001460 Simmondsia chinensis HOM05D004587 ORTHO05D005512 1.7e-29 133.3 157 44.6
Manes.15G168700 Manihot esculenta HOM05D004587 ORTHO05D005512 2.9e-29 132.5 167 42.5
GSVIVG01013197001 Vitis vinifera HOM05D004587 ORTHO05D005512 3.8e-29 132.1 161 44.7
FAN13G1185 Fragaria x ananassa HOM05D004587 ORTHO05D005512 6.4e-29 131.3 155 46.5
Hund14406 Selenicereus undatus HOM05D004587 ORTHO05D005512 6.4e-29 131.3 162 48.1
Solyc08g077040.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 8.4e-29 131.0 161 46.0
Sopen08g025620 Solanum pennellii HOM05D004587 ORTHO05D005512 8.4e-29 131.0 159 45.3
Actinidia25956 Actinidia chinensis HOM05D004587 ORTHO05D005512 1.4e-28 130.2 156 46.8
Nitab4.5_0006066g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 1.9e-28 129.8 162 50.0
ECA240G1087 Erigeron canadensis HOM05D004587 ORTHO05D005512 2.4e-28 129.4 167 44.3
SGA_v2.0_scaffold108G30874 Striga asiatica HOM05D004587 ORTHO05D005512 4.2e-28 128.6 160 44.4
TPR.G7834 Trifolium pratense HOM05D004587 ORTHO05D005512 9.3e-28 127.5 167 46.1
SGA_v2.0_scaffold195G40785 Striga asiatica HOM05D004587 ORTHO05D005512 1.2e-27 127.1 159 43.4
vmacro14165 Vaccinium macrocarpon HOM05D004587 ORTHO05D005512 1.2e-27 127.1 161 44.1
Lj2g0006519 Lotus japonicus HOM05D004587 ORTHO05D005512 2.1e-27 126.3 160 45.6
Phvul.002G006600 Phaseolus vulgaris HOM05D004587 ORTHO05D005512 2.1e-27 126.3 158 46.8
Peaxi162Scf00615g00515 Petunia axillaris HOM05D004587 ORTHO05D005512 3.5e-27 125.6 165 47.9
Migut.C00969 Erythranthe guttata HOM05D004587 ORTHO05D005512 1.8e-26 123.2 164 41.5
Sabra01G0112000 Salix brachista HOM05D004587 ORTHO05D005512 2.3e-26 122.9 263 32.3
TAR375G0250 Trochodendron aralioides HOM05D004587 ORTHO05D005512 2.3e-26 122.9 156 44.2
Medtr5g014320 Medicago truncatula HOM05D004587 ORTHO05D005512 3.0e-26 122.5 171 43.3
Glyma.01G199100 Glycine max HOM05D004587 ORTHO05D005512 6.7e-26 121.3 159 46.5
Nitab4.5_0000256g0420 Nicotiana tabacum HOM05D004587 ORTHO05D005512 6.7e-26 121.3 159 45.9
PGSC0003DMG402002106 Solanum tuberosum HOM05D004587 ORTHO05D005512 8.7e-26 120.9 156 44.9
AUR62007272 Chenopodium quinoa HOM05D004587 ORTHO05D005512 1.1e-25 120.6 164 42.7
Duzib205G0684 Durio zibethinus HOM05D004587 ORTHO05D005512 1.1e-25 120.6 161 42.9
Peaxi162Scf00460g00412 Petunia axillaris HOM05D004587 ORTHO05D005512 1.1e-25 120.6 160 45.6
Rhsim07G0126100 Rhododendron simsii HOM05D004587 ORTHO05D005512 1.1e-25 120.6 161 44.7
QL12p005998 Quercus lobata HOM05D004587 ORTHO05D005512 1.5e-25 120.2 220 34.5
HPP92_001567 Vanilla planifolia HOM05D004587 ORTHO05D005512 1.5e-25 120.2 156 41.7
HPP92_001722 Vanilla planifolia HOM05D004587 ORTHO05D005512 1.5e-25 120.2 156 41.7
MSTRG.1101 Avicennia marina HOM05D004587 ORTHO05D005512 1.9e-25 119.8 158 40.5
Cc08_g02530 Coffea canephora HOM05D004587 ORTHO05D005512 2.5e-25 119.4 156 42.3
PSO063G5829 Papaver somniferum HOM05D004587 ORTHO05D005512 2.5e-25 119.4 188 37.8
Solyc06g061140.3 Solanum lycopersicum HOM05D004587 ORTHO05D005512 2.5e-25 119.4 158 44.3
Ah.07g200250 Amaranthus hybridus HOM05D004587 ORTHO05D005512 3.3e-25 119.0 160 44.4
AL7G30750 Arabidopsis lyrata HOM05D004587 ORTHO05D005512 9.6e-25 117.5 80 76.2
DCAR_008278 Daucus carota HOM05D004587 ORTHO05D005512 1.6e-24 116.7 163 42.3
VMungo1215G2797 Vigna mungo HOM05D000740 ORTHO05D005071 2.1e-24 116.3 154 44.2
Lj2C242G4 Lonicera japonica HOM05D004587 ORTHO05D005512 2.8e-24 115.9 147 44.2
Lsat_1_v5_gn_6_64781 Lactuca sativa HOM05D004587 ORTHO05D005512 3.7e-24 115.5 160 41.9
Sopen06g021340 Solanum pennellii HOM05D004587 ORTHO05D005512 3.7e-24 115.5 158 45.6
AUR62018727 Chenopodium quinoa HOM05D004587 ORTHO05D005512 4.8e-24 115.2 160 41.2
EL10Ac5g12139 Beta vulgaris HOM05D004587 ORTHO05D005512 6.2e-24 114.8 157 43.9
HanXRQChr02g0043541 Helianthus annuus HOM05D004587 ORTHO05D005512 1.4e-23 113.6 157 40.8
PSO782G4837 Papaver somniferum HOM05D004587 ORTHO05D005512 1.4e-23 113.6 189 36.0
Aqoxy3G02401 Aquilegia oxysepala HOM05D004587 ORTHO05D005512 2.4e-23 112.8 178 42.1
MD16G1276500 Malus domestica HOM05D004587 ORTHO05D005512 9.0e-23 110.9 136 46.3
MSTRG.25306 Avicennia marina HOM05D004587 ORTHO05D005512 1.2e-22 110.5 158 40.5
Sabra03G0060300 Salix brachista HOM05D004587 ORTHO05D005512 1.2e-22 110.5 242 33.1
CAN.G201.22 Capsicum annuum HOM05D004587 ORTHO05D005512 1.5e-22 110.2 156 41.7
SHI31713 Sapria himalayana HOM05D000449 ORTHO05D000360 2.6e-22 109.4 154 40.3
ECA233G1850 Erigeron canadensis HOM05D004587 ORTHO05D005512 4.5e-22 108.6 111 51.4
Zm00001eb208820 Zea mays HOM05D004587 ORTHO05D005512 1.7e-21 106.7 158 41.8
Lj8A293T23 Lonicera japonica HOM05D004587 ORTHO05D005512 3.8e-21 105.5 220 33.6
SalBow7G3710 Salvia bowleyana HOM05D004587 ORTHO05D005512 3.8e-21 105.5 196 35.2
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 4.9e-21 105.1 107 46.7
ATR0049G023 Amborella trichopoda HOM05D004587 ORTHO05D005512 1.4e-20 103.6 156 39.1
CDE12G0528 Ceratophyllum demersum HOM05D004587 ORTHO05D005512 2.5e-20 102.8 164 40.9
Ah.12g054920 Amaranthus hybridus HOM05D004587 ORTHO05D005512 3.2e-20 102.4 161 42.2
HPP92_001583 Vanilla planifolia HOM05D004587 ORTHO05D005512 4.2e-20 102.1 174 36.2
Glyma.11G042700 Glycine max HOM05D004587 ORTHO05D005512 7.9e-19 97.8 159 40.3
Os02g0128100 Oryza sativa ssp. japonica HOM05D004587 ORTHO05D005512 8.7e-18 94.4 107 44.9
Ciclev10033624m.g Citrus clementina HOM05D004587 ORTHO05D005512 1.4e-15 87.0 81 48.1
Mapoly0066s0035 Marchantia polymorpha HOM05D004587 ORTHO05D005512 6.9e-15 84.7 150 36.0
Zm00001eb231030 Zea mays HOM05D004587 ORTHO05D005512 7.6e-14 81.3 160 33.1
Nitab4.5_0001276g0030 Nicotiana tabacum HOM05D004587 ORTHO05D005512 1.0e-13 80.9 77 53.2
Haze_08256 Corylus avellana HOM05D004587 ORTHO05D005512 2.9e-13 79.3 75 49.3
Cpa.g.sc90.49 Carica papaya HOM05D004587 ORTHO05D005512 1.1e-12 77.4 88 45.5
CAN.G1659.7 Capsicum annuum HOM05D004587 ORTHO05D005512 3.2e-12 75.9 78 50.0
AagrBONN_evm.TU.Sc2ySwM_228.3589 Anthoceros agrestis HOM05D004587 ORTHO05D005512 4.2e-12 75.5 127 37.0
Ciclev10033884m.g Citrus clementina HOM05D004587 ORTHO05D005512 1.6e-11 73.6 85 49.4
Cpa.g.sc90.47 Carica papaya HOM05D004587 ORTHO05D005512 2.1e-11 73.2 74 50.0
SEGI_38344 Sequoiadendron giganteum HOM05D004587 ORTHO05D005512 1.0e-10 70.9 97 42.3
Cfa012421 Carpinus fangiana HOM05D004587 ORTHO05D005512 8.7e-10 67.8 87 41.4
Haze_08255 Corylus avellana HOM05D004587 ORTHO05D005512 1.1e-09 67.4 86 40.7
Nitab4.5_0001276g0020 Nicotiana tabacum HOM05D004587 ORTHO05D005512 2.5e-09 66.2 92 41.3
Pp3c4_4690 Physcomitrium patens HOM05D004587 ORTHO05D005512 1.6e-08 63.5 142 35.9
Pp3c10_13670 Physcomitrium patens HOM05D004587 ORTHO05D005512 1.4e-07 60.5 106 35.8
Actinidia03381 Actinidia chinensis HOM05D004587 ORTHO05D005512 1.0e-05 54.3 78 42.3


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