Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p08560 Brassica napus HOM05D010143 ORTHO05D010368 1.5e-112 409.5 197 100.0
BraA01t00806Z Brassica rapa HOM05D010143 ORTHO05D010368 1.5e-112 409.5 197 100.0
C01p10000 Brassica napus HOM05D010143 ORTHO05D010368 8.3e-103 377.1 197 93.9
BcaC09g51735 Brassica carinata HOM05D010143 ORTHO05D010368 2.3e-100 369.0 190 94.7
Thhalv10001101m.g Eutrema salsugineum HOM05D010143 ORTHO05D010368 8.7e-68 260.8 214 61.7
AT3G04900 Arabidopsis thaliana HOM05D010143 ORTHO05D010368 3.5e-61 238.8 210 64.3
BcaC09g51734 Brassica carinata HOM05D010143 ORTHO05D010368 1.7e-60 236.5 185 69.7
CARHR079170 Cardamine hirsuta HOM05D010143 ORTHO05D010368 6.6e-60 234.6 222 58.1
AL3G15190 Arabidopsis lyrata HOM05D010143 ORTHO05D010368 6.2e-58 228.0 199 63.3
Carub.0003s0410 Capsella rubella HOM05D010143 ORTHO05D010368 7.1e-54 214.5 204 57.8
THA.LOC104823057 Tarenaya hassleriana HOM05D010143 ORTHO05D010368 1.5e-51 206.8 208 55.8
Sp4g30010 Schrenkiella parvula HOM05D010143 ORTHO05D010368 5.3e-49 198.4 169 65.1
Potri.004G144200 Populus trichocarpa HOM05D010143 ORTHO05D010368 8.5e-15 84.7 135 35.6
Sabra04G0095800 Salix brachista HOM05D010143 ORTHO05D010368 4.7e-13 79.0 175 31.4
Gohir.A11G120300 Gossypium hirsutum HOM05D016083 ORTHO05D010368 4.4e-11 72.4 233 28.3
Gohir.A12G006300 Gossypium hirsutum HOM05D016083 ORTHO05D010368 4.4e-11 72.4 101 35.6
Gohir.D12G005750 Gossypium hirsutum HOM05D016083 ORTHO05D010368 9.7e-11 71.2 101 35.6
Gorai.008G005700 Gossypium raimondii HOM05D016083 ORTHO05D010368 9.7e-11 71.2 101 35.6
Duzib138G0353 Durio zibethinus HOM05D016083 ORTHO05D010368 3.7e-10 69.3 76 40.8
Gorai.007G134300 Gossypium raimondii HOM05D016083 ORTHO05D010368 6.3e-10 68.6 233 27.9
Atru.chr5.1356 Acer truncatum HOM05D010143 ORTHO05D010368 8.2e-10 68.2 214 29.0
QL12p022735 Quercus lobata HOM05D010143 ORTHO05D010368 1.1e-09 67.8 86 37.2
QL05p060436 Quercus lobata HOM05D012615 ORTHO05D010044 2.6e-08 63.2 83 36.1
Potri.009G126600 Populus trichocarpa HOM05D014780 ORTHO05D010368 7.7e-08 61.6 75 36.0
Lj4g0007031 Lotus japonicus HOM05D010143 ORTHO05D010368 1.3e-07 60.8 84 36.9
Haze_05094 Corylus avellana HOM05D010143 ORTHO05D010368 1.7e-07 60.5 198 25.3
ClCG09G006850 Citrullus lanatus HOM05D029525 ORTHO05D010368 2.2e-07 60.1 71 36.6
Sabra09G0097300 Salix brachista HOM05D000057 ORTHO05D010368 2.2e-07 60.1 111 32.4
CANSAT54G1951 Cannabis sativa HOM05D000520 ORTHO05D000399 2.9e-07 59.7 84 33.3
Potri.001G326100 Populus trichocarpa HOM05D014780 ORTHO05D010368 2.9e-07 59.7 74 41.9
Sed0006744 Sechium edule HOM05D029525 ORTHO05D010368 3.8e-07 59.3 73 38.4
TPR.G39231 Trifolium pratense HOM05D010143 ORTHO05D010368 3.8e-07 59.3 77 35.1
Ca_21110_v3 Cicer arietinum L. HOM05D010143 ORTHO05D010368 8.5e-07 58.2 81 38.3
CSS0027010 Camellia sinensis var. sinensis HOM05D030391 ORTHO05D010368 1.1e-06 57.8 77 39.0
Psat4g008840 Pisum sativum HOM05D010143 ORTHO05D010368 3.2e-06 56.2 84 36.9
Thecc.05G306700 Theobroma cacao HOM05D000520 ORTHO05D000399 5.5e-06 55.5 93 33.3
Atru.chr5.1357 Acer truncatum HOM05D000520 ORTHO05D010368 9.4e-06 54.7 65 36.9


User provided reference genes

Program Settings