Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p08520 Brassica napus HOM05D004932 ORTHO05D005622 2.2e-166 589.0 311 100.0
BraA01t00801Z Brassica rapa HOM05D004932 ORTHO05D005622 2.6e-159 565.5 319 94.7
BcaC09g51740 Brassica carinata HOM05D004932 ORTHO05D005622 3.2e-149 531.9 309 93.2
C01p09950 Brassica napus HOM05D004932 ORTHO05D005622 7.1e-149 530.8 316 91.8
BolC1t00957H Brassica oleracea HOM05D004932 ORTHO05D005622 7.1e-149 530.8 316 91.8
Thhalv10025804m.g Eutrema salsugineum HOM05D004932 ORTHO05D005622 1.2e-140 503.4 311 87.5
BcaC01g01175 Brassica carinata HOM05D004932 ORTHO05D005622 2.4e-136 489.2 314 85.0
A08p19620 Brassica napus HOM05D004932 ORTHO05D005622 2.6e-135 485.7 314 85.4
BraA08t33920Z Brassica rapa HOM05D004932 ORTHO05D005622 7.6e-135 484.2 315 84.8
Sp7g27380 Schrenkiella parvula HOM05D004932 ORTHO05D005622 1.3e-134 483.4 314 85.7
BolC3t21234H Brassica oleracea HOM05D004932 ORTHO05D005622 3.8e-134 481.9 315 84.4
C03p89240 Brassica napus HOM05D004932 ORTHO05D005622 4.2e-133 478.4 315 83.8
AT4G29520 Arabidopsis thaliana HOM05D004932 ORTHO05D005622 3.9e-131 471.9 314 83.8
AL7G22880 Arabidopsis lyrata HOM05D004932 ORTHO05D005622 1.1e-130 470.3 315 84.8
Carub.0007s1103 Capsella rubella HOM05D004932 ORTHO05D005622 3.7e-129 465.3 314 82.2
BcaB03g12610 Brassica carinata HOM05D004932 ORTHO05D005622 2.9e-126 455.7 313 81.5
CARHR237350 Cardamine hirsuta HOM05D004932 ORTHO05D005622 1.6e-124 449.9 310 81.3
THA.LOC104814605 Tarenaya hassleriana HOM05D004932 ORTHO05D005622 6.7e-115 417.9 312 73.7
Aa31LG2G20960 Aethionema arabicum HOM05D004932 ORTHO05D005622 9.4e-109 397.5 311 72.3
SalBow1G2721 Salvia bowleyana HOM05D004932 ORTHO05D005622 1.3e-97 360.5 308 60.7
Gohir.A07G010100 Gossypium hirsutum HOM05D004932 ORTHO05D005622 5.3e-96 355.1 305 65.9
Eucgr.C00917 Eucalyptus grandis HOM05D004932 ORTHO05D005622 1.2e-95 354.0 312 60.9
Gohir.D07G010400 Gossypium hirsutum HOM05D004932 ORTHO05D005622 1.2e-95 354.0 309 64.4
Gorai.001G010800 Gossypium raimondii HOM05D004932 ORTHO05D005622 1.2e-95 354.0 309 64.4
PGR142G3354 Punica granatum HOM05D004932 ORTHO05D005622 7.7e-95 351.3 314 62.4
Duzib168G1170 Durio zibethinus HOM05D004932 ORTHO05D005622 2.9e-94 349.4 297 63.6
CANSAT56G0365 Cannabis sativa HOM05D004932 ORTHO05D005622 6.5e-94 348.2 309 62.5
Manes.14G155500 Manihot esculenta HOM05D004932 ORTHO05D005622 4.7e-92 342.0 315 59.0
PGSC0003DMG400008434 Solanum tuberosum HOM05D004932 ORTHO05D005622 4.7e-92 342.0 303 60.4
FvH4_1g07000 Fragaria vesca HOM05D004932 ORTHO05D005622 1.4e-91 340.5 312 60.6
Solyc07g032250.4 Solanum lycopersicum HOM05D004932 ORTHO05D005622 1.8e-91 340.1 303 60.4
Manes.16G104000 Manihot esculenta HOM05D004932 ORTHO05D005622 2.3e-91 339.7 315 58.7
Hma1.2p1_0798F.1_g219580 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 3.9e-91 339.0 304 58.9
Lj2g0005770 Lotus japonicus HOM05D004932 ORTHO05D005622 3.9e-91 339.0 308 60.4
Duzib150G0148 Durio zibethinus HOM05D004932 ORTHO05D005622 5.2e-91 338.6 305 60.7
Lalb_Chr24g0393881 Lupinus albus HOM05D004932 ORTHO05D005622 6.7e-91 338.2 295 61.4
Sopen07g015910 Solanum pennellii HOM05D004932 ORTHO05D005622 6.7e-91 338.2 303 60.4
TWI63G1476 Tripterygium wilfordii HOM05D004932 ORTHO05D005622 1.1e-90 337.4 313 59.4
MD15G1203900 Malus domestica HOM05D004932 ORTHO05D005622 1.5e-90 337.0 314 59.9
Actinidia29889 Actinidia chinensis HOM05D004932 ORTHO05D005622 2.0e-90 336.7 314 59.6
Dinv42295 Davidia involucrata HOM05D004932 ORTHO05D005622 7.4e-90 334.7 312 57.7
FAN26G1352 Fragaria x ananassa HOM05D004932 ORTHO05D005622 9.7e-90 334.3 313 60.1
FAN26G3436 Fragaria x ananassa HOM05D004932 ORTHO05D005622 9.7e-90 334.3 313 60.1
MSTRG.10579 Avicennia marina HOM05D004932 ORTHO05D005622 1.3e-89 334.0 312 59.0
arahy.Tifrunner.gnm1.ann1.NAI4LE Arachis hypogaea HOM05D004932 ORTHO05D005622 1.7e-89 333.6 306 60.1
CAN.G1837.4 Capsicum annuum HOM05D004932 ORTHO05D005622 2.8e-89 332.8 311 57.9
FAN28G1050 Fragaria x ananassa HOM05D004932 ORTHO05D005622 6.3e-89 331.6 313 59.7
Ca_25616_v3 Cicer arietinum L. HOM05D004932 ORTHO05D005622 1.1e-88 330.9 300 60.7
FAN19G2121 Fragaria x ananassa HOM05D004932 ORTHO05D005622 1.1e-88 330.9 313 59.7
arahy.Tifrunner.gnm1.ann1.RRYY0T Arachis hypogaea HOM05D004932 ORTHO05D005622 1.4e-88 330.5 301 60.5
Atru.chr7.1544 Acer truncatum HOM05D004932 ORTHO05D005622 1.8e-88 330.1 314 58.9
FAN23G2709 Fragaria x ananassa HOM05D004932 ORTHO05D005622 3.1e-88 329.3 313 59.4
Medtr6g091780 Medicago truncatula HOM05D004932 ORTHO05D005622 3.1e-88 329.3 294 61.2
Nitab4.5_0007297g0010 Nicotiana tabacum HOM05D004932 ORTHO05D005622 5.3e-88 328.6 306 58.5
Nitab4.5_0000713g0230 Nicotiana tabacum HOM05D004932 ORTHO05D005622 2.6e-87 326.2 306 58.8
Thecc.09G093000 Theobroma cacao HOM05D004932 ORTHO05D005622 7.7e-87 324.7 298 60.1
Lalb_Chr14g0375311 Lupinus albus HOM05D004932 ORTHO05D005622 1.7e-86 323.6 295 60.7
MELO3C015448.2 Cucumis melo HOM05D004932 ORTHO05D005622 6.5e-86 321.6 304 59.9
Glyma.07G128200 Glycine max HOM05D004932 ORTHO05D005622 6.5e-86 321.6 303 58.7
QL02p063162 Quercus lobata HOM05D004932 ORTHO05D005622 6.5e-86 321.6 303 58.7
Dinv36742 Davidia involucrata HOM05D004932 ORTHO05D005622 8.5e-86 321.2 312 57.1
CsaV3_1G040210 Cucumis sativus L. HOM05D004932 ORTHO05D005622 1.9e-85 320.1 303 58.4
CsaV3_UNG060480 Cucumis sativus L. HOM05D004932 ORTHO05D005622 1.9e-85 320.1 303 58.4
GSVIVG01015235001 Vitis vinifera HOM05D004932 ORTHO05D005622 1.9e-85 320.1 306 57.5
Aqoxy7G01262 Aquilegia oxysepala HOM05D004932 ORTHO05D005622 2.5e-85 319.7 312 56.4
Lj7C672T15 Lonicera japonica HOM05D004932 ORTHO05D005622 4.2e-85 318.9 289 58.8
CiPaw.03G218800 Carya illinoinensis HOM05D004932 ORTHO05D005622 1.2e-84 317.4 304 57.6
EL10Ac8g19275 Beta vulgaris HOM05D004932 ORTHO05D005622 2.1e-84 316.6 311 56.9
Cpa.g.sc7.248 Carica papaya HOM05D004932 ORTHO05D005622 3.6e-84 315.8 312 59.3
ClCG03G015800 Citrullus lanatus HOM05D004932 ORTHO05D005622 3.6e-84 315.8 304 58.2
PSO210G2479 Papaver somniferum HOM05D004932 ORTHO05D005622 4.7e-84 315.5 304 56.9
Nn6g35421 Nelumbo nucifera HOM05D004932 ORTHO05D005622 8.0e-84 314.7 313 55.0
COL.COLO4_18228 Corchorus olitorius HOM05D004932 ORTHO05D005622 3.4e-82 309.3 308 57.8
ATR0789G094 Amborella trichopoda HOM05D004932 ORTHO05D005622 9.7e-82 307.8 296 54.1
Potri.018G067300 Populus trichocarpa HOM05D004932 ORTHO05D005622 1.3e-81 307.4 308 55.8
MD02G1074400 Malus domestica HOM05D004932 ORTHO05D005622 1.7e-81 307.0 313 57.2
Haze_25884 Corylus avellana HOM05D004932 ORTHO05D005622 2.8e-81 306.2 305 56.4
Cc06_g11080 Coffea canephora HOM05D004932 ORTHO05D005622 4.8e-81 305.4 307 54.1
Sc18g0001850 Simmondsia chinensis HOM05D004932 ORTHO05D005622 6.3e-81 305.1 264 62.1
Prupe.7G213500 Prunus persica HOM05D004932 ORTHO05D005622 8.3e-81 304.7 313 56.5
Os06g0150400 Oryza sativa ssp. japonica HOM05D004932 ORTHO05D005622 1.8e-80 303.5 284 58.5
Sabra18G0059800 Salix brachista HOM05D004932 ORTHO05D005622 3.1e-80 302.8 304 55.6
Zm00001eb376850 Zea mays HOM05D004932 ORTHO05D005622 4.1e-80 302.4 310 55.5
ECA234G2984 Erigeron canadensis HOM05D004932 ORTHO05D005622 5.3e-80 302.0 267 59.2
Medtr6g090810 Medicago truncatula HOM05D004932 ORTHO05D005622 1.2e-79 300.8 294 58.5
PSO210G4737 Papaver somniferum HOM05D004932 ORTHO05D005622 1.2e-79 300.8 301 54.8
Phvul.004G172100 Phaseolus vulgaris HOM05D004932 ORTHO05D005622 4.5e-79 298.9 301 55.8
HanXRQChr10g0319131 Helianthus annuus HOM05D004932 ORTHO05D005622 7.7e-79 298.1 314 53.5
VMungo0464G1844 Vigna mungo HOM05D004932 ORTHO05D005622 7.7e-79 298.1 294 56.1
Ciclev10009015m.g Citrus clementina HOM05D004932 ORTHO05D005622 1.3e-78 297.4 311 55.0
Glyma.01G003700 Glycine max HOM05D004932 ORTHO05D005622 1.3e-78 297.4 301 55.1
Oeu000325.1 Olea europaea HOM05D001440 ORTHO05D005622 1.7e-78 297.0 252 63.1
CSS0009775 Camellia sinensis var. sinensis HOM05D004932 ORTHO05D005622 4.2e-77 292.4 306 55.2
RcHm_v2.0_Chr2g0092951 Rosa chinensis HOM05D004932 ORTHO05D005622 9.4e-77 291.2 312 53.8
CDE05G0556 Ceratophyllum demersum HOM05D004932 ORTHO05D005622 1.2e-76 290.8 314 52.9
Sed0008469 Sechium edule HOM05D004932 ORTHO05D005622 2.1e-76 290.0 240 62.5
TPR.G35493 Trifolium pratense HOM05D004932 ORTHO05D005622 3.6e-76 289.3 298 55.7
Medtr6g092180 Medicago truncatula HOM05D004932 ORTHO05D005622 3.0e-75 286.2 294 56.8
arahy.Tifrunner.gnm1.ann1.XF40UC Arachis hypogaea HOM05D004932 ORTHO05D005622 8.8e-75 284.6 313 55.0
AUR62031253 Chenopodium quinoa HOM05D004932 ORTHO05D005622 1.2e-74 284.3 307 53.1
AUR62027447 Chenopodium quinoa HOM05D004932 ORTHO05D005622 2.6e-74 283.1 307 53.7
Psat1g049760 Pisum sativum HOM05D004932 ORTHO05D005622 5.7e-74 282.0 298 55.0
Ah.09g228480 Amaranthus hybridus HOM05D004932 ORTHO05D005622 9.8e-74 281.2 307 51.8
Peaxi162Scf00444g00617 Petunia axillaris HOM05D004932 ORTHO05D005622 9.8e-74 281.2 308 51.0
vmacro06275 Vaccinium macrocarpon HOM05D004932 ORTHO05D005622 1.3e-73 280.8 312 53.2
Migut.K00580 Erythranthe guttata HOM05D004932 ORTHO05D005622 1.7e-73 280.4 314 52.2
SGA_v2.0_scaffold10G05207 Striga asiatica HOM05D004932 ORTHO05D005622 1.7e-73 280.4 364 47.8
arahy.Tifrunner.gnm1.ann1.E8KE86 Arachis hypogaea HOM05D004932 ORTHO05D005622 3.7e-73 279.3 307 54.1
unitig_749.g14227 Utricularia gibba HOM05D004932 ORTHO05D005622 3.7e-73 279.3 284 54.6
HPP92_004560 Vanilla planifolia HOM05D004932 ORTHO05D005622 3.7e-73 279.3 307 51.1
SEGI_24488 Sequoiadendron giganteum HOM05D004932 ORTHO05D005622 6.3e-73 278.5 323 50.5
Lsat_1_v5_gn_5_145840 Lactuca sativa HOM05D004932 ORTHO05D005622 1.1e-72 277.7 317 51.7
CDE05G1139 Ceratophyllum demersum HOM05D004932 ORTHO05D005622 7.7e-71 271.6 271 54.2
Rhsim03G0234400 Rhododendron simsii HOM05D004932 ORTHO05D005622 1.9e-69 266.9 314 50.6
DCAR_011989 Daucus carota HOM05D004932 ORTHO05D005622 2.3e-67 260.0 250 55.2
SHI02816 Sapria himalayana HOM05D004932 ORTHO05D005622 1.6e-63 247.3 228 57.9
TAR365G0154 Trochodendron aralioides HOM05D004932 ORTHO05D005622 4.6e-63 245.7 239 53.1
unitig_78.g29619 Utricularia gibba HOM05D004932 ORTHO05D005622 1.5e-61 240.7 270 51.5
Medtr6g092150 Medicago truncatula HOM05D004932 ORTHO05D005622 4.7e-60 235.7 321 47.0
Pp3c4_19450 Physcomitrium patens HOM05D004932 ORTHO05D005622 2.9e-57 226.5 312 45.2
Cfa003116 Carpinus fangiana HOM05D004932 ORTHO05D005622 2.4e-56 223.4 233 54.5
Mapoly0075s0048 Marchantia polymorpha HOM05D004932 ORTHO05D005622 1.2e-55 221.1 320 45.9
AagrBONN_evm.TU.Sc2ySwM_362.2022 Anthoceros agrestis HOM05D004932 ORTHO05D005622 1.5e-53 214.2 202 56.4
HanXRQChr12g0355371 Helianthus annuus HOM05D004932 ORTHO05D005622 3.4e-50 203.0 315 43.8
arahy.Tifrunner.gnm1.ann1.GR1INA Arachis hypogaea HOM05D004932 ORTHO05D005622 2.4e-48 196.8 186 58.1
SMO361G0136 Selaginella moellendorffii HOM05D004932 ORTHO05D005622 8.3e-41 171.8 320 36.2
CBR_g8029 Chara braunii HOM05D004932 ORTHO05D005622 1.7e-38 164.1 254 39.0
Cc06_g18040 Coffea canephora HOM05D004932 ORTHO05D005622 6.6e-38 162.2 206 46.6
arahy.Tifrunner.gnm1.ann1.Y4MEFZ Arachis hypogaea HOM05D004932 ORTHO05D005622 2.4e-32 143.7 98 71.4
unitig_26.g9168 Utricularia gibba HOM05D004932 ORTHO05D005622 4.3e-29 132.9 142 54.2
Oeu037599.1 Olea europaea HOM05D004932 ORTHO05D005622 1.7e-25 120.9 285 34.4
MCO04G519 Micromonas commoda HOM05D004932 ORTHO05D005622 4.9e-25 119.4 175 36.0
PRCOL_00005979 Prasinoderma coloniale HOM05D004932 ORTHO05D005622 1.6e-23 114.4 229 31.0
Hma1.2p1_0798F.1_g219570 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 4.6e-23 112.8 137 49.6
Hma1.2p1_1074F.1_g254276 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 4.6e-23 112.8 137 49.6
Cre03.g151700 Chlamydomonas reinhardtii HOM05D004932 ORTHO05D005622 6.6e-22 109.0 213 33.3
arahy.Tifrunner.gnm1.ann1.XYZ5FS Arachis hypogaea HOM05D004932 ORTHO05D005622 2.4e-19 100.5 68 64.7
CARHR109770 Cardamine hirsuta HOM05D004932 ORTHO05D005622 6.9e-19 99.0 119 54.6
Hma1.2p1_1586F.1_g292210 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 2.0e-18 97.4 66 63.6
RcHm_v2.0_Chr5g0016971 Rosa chinensis HOM05D004932 ORTHO05D005622 2.9e-17 93.6 64 70.3
RcHm_v2.0_Chr4g0402141 Rosa chinensis HOM05D004932 ORTHO05D005622 1.1e-16 91.7 69 66.7
Hma1.2p1_1881F.1_g306380 Hydrangea macrophylla HOM05D004932 ORTHO05D005622 1.8e-14 84.3 75 52.0
CiPaw.05G072200 Carya illinoinensis HOM05D004932 ORTHO05D005622 5.8e-10 69.3 50 62.0
Nn3g21874 Nelumbo nucifera HOM05D004932 ORTHO05D005622 7.6e-10 68.9 45 62.2
Nn2g13205 Nelumbo nucifera HOM05D004932 ORTHO05D005622 2.9e-09 67.0 61 55.7
Oeu037598.1 Olea europaea HOM05D004932 ORTHO05D005622 9.3e-08 62.0 99 44.4
arahy.Tifrunner.gnm1.ann1.P1T2M1 Arachis hypogaea HOM05D000368 ORTHO05D000289 2.7e-07 60.5 39 66.7
TAR636G2165 Trochodendron aralioides HOM05D004932 ORTHO05D005622 2.7e-07 60.5 66 53.0
unitig_26.g9167 Utricularia gibba HOM05D004932 ORTHO05D005622 4.6e-07 59.7 121 38.0
Medtr6g077350 Medicago truncatula HOM05D004932 ORTHO05D005622 6.7e-06 55.8 44 63.6


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