Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p08190 Brassica napus HOM05D000848 ORTHO05D003342 1.7e-57 225.7 107 100.0
BraA05t19719Z Brassica rapa HOM05D000848 ORTHO05D003342 3.0e-46 188.3 94 93.6
BcaB02g08198 Brassica carinata HOM05D000848 ORTHO05D003342 7.1e-32 140.6 91 75.8
C05p58720 Brassica napus HOM05D000848 ORTHO05D021910 6.6e-30 134.0 81 79.0
A07p34870 Brassica napus HOM05D000848 ORTHO05D003342 3.1e-27 125.2 92 64.1
A03p57190 Brassica napus HOM05D000848 ORTHO05D003342 1.2e-26 123.2 85 64.7
BNapus_Darmor_BZH_scaffold_64p00140 Brassica napus HOM05D000848 ORTHO05D003342 1.2e-26 123.2 85 64.7
BolC3t12896H Brassica oleracea HOM05D000848 ORTHO05D003342 6.4e-25 117.5 96 60.4
BraA06t24860Z Brassica rapa HOM05D000848 ORTHO05D032124 6.4e-25 117.5 78 69.2
A07p37240 Brassica napus HOM05D000848 ORTHO05D003342 8.4e-25 117.1 98 60.2
C01p37290 Brassica napus HOM05D000848 ORTHO05D003342 8.4e-25 117.1 98 60.2
BraA07t31284Z Brassica rapa HOM05D000848 ORTHO05D003342 8.4e-25 117.1 98 60.2
C01p38710 Brassica napus HOM05D000848 ORTHO05D003342 1.4e-24 116.3 97 60.8
C07p07060 Brassica napus HOM05D000848 ORTHO05D003342 1.4e-24 116.3 96 60.4
BcaC05g25055 Brassica carinata HOM05D000848 ORTHO05D003342 2.4e-24 115.5 96 58.3
C04p01170 Brassica napus HOM05D000848 ORTHO05D003342 2.4e-24 115.5 90 64.4
C01p33860 Brassica napus HOM05D000848 ORTHO05D003342 4.2e-24 114.8 84 66.7
BolC9t57644H Brassica oleracea HOM05D000848 ORTHO05D003342 4.2e-24 114.8 98 59.2
A02p09070 Brassica napus HOM05D000848 ORTHO05D003342 5.4e-24 114.4 97 59.8
C07p42200 Brassica napus HOM05D000848 ORTHO05D003342 5.4e-24 114.4 97 59.8
C01p28500 Brassica napus HOM05D000848 ORTHO05D003342 1.6e-23 112.8 89 62.9
BolC3t18957H Brassica oleracea HOM05D000848 ORTHO05D000007 1.6e-23 112.8 87 59.8
A09p39190 Brassica napus HOM05D000848 ORTHO05D003342 6.0e-23 110.9 72 75.0
BraA02t08013Z Brassica rapa HOM05D000848 ORTHO05D003342 2.3e-22 109.0 87 60.9
C09p53680 Brassica napus HOM05D013019 ORTHO05D003342 3.3e-21 105.1 92 58.7
BolC9t58243H Brassica oleracea HOM05D013019 ORTHO05D003342 3.3e-21 105.1 92 58.7
BraA05t20699Z Brassica rapa HOM05D013019 ORTHO05D003342 7.4e-21 104.0 92 58.7
BcaC02g11361 Brassica carinata HOM05D000848 ORTHO05D011438 1.6e-20 102.8 77 61.0
BraA01t03871Z Brassica rapa HOM05D000848 ORTHO05D003342 3.7e-20 101.7 57 78.9
BolC3t18271H Brassica oleracea HOM05D000848 ORTHO05D022013 6.2e-20 100.9 81 63.0
BolC9t59892H Brassica oleracea HOM05D000848 ORTHO05D033378 8.1e-20 100.5 51 86.3
A01p38120 Brassica napus HOM05D000848 ORTHO05D003342 2.4e-19 99.0 59 76.3
C06p21550 Brassica napus HOM05D000848 ORTHO05D022013 2.4e-19 99.0 81 61.7
BcaB06g25358 Brassica carinata HOM05D000848 ORTHO05D003342 4.0e-19 98.2 83 57.8
BcaC05g30229 Brassica carinata HOM05D000848 ORTHO05D003342 4.0e-19 98.2 83 57.8
BolC3t20476H Brassica oleracea HOM05D000848 ORTHO05D003342 5.3e-19 97.8 77 59.7
A03p12850 Brassica napus HOM05D000848 ORTHO05D011438 6.9e-19 97.4 77 59.7
BolC4t22620H Brassica oleracea HOM05D000848 ORTHO05D011438 6.9e-19 97.4 77 59.7
BraA03t10593Z Brassica rapa HOM05D000848 ORTHO05D011438 6.9e-19 97.4 77 59.7
C03p45200 Brassica napus HOM05D000848 ORTHO05D003342 2.0e-18 95.9 58 72.4
BolC2t11819H Brassica oleracea HOM05D000848 ORTHO05D015498 2.0e-18 95.9 88 56.8
C09p41410 Brassica napus HOM05D000848 ORTHO05D011438 3.4e-18 95.1 77 58.4
BolC9t57016H Brassica oleracea HOM05D000848 ORTHO05D011438 3.4e-18 95.1 77 58.4
BcaC09g49472 Brassica carinata HOM05D000848 ORTHO05D003342 4.5e-18 94.7 84 59.5
C04p56700 Brassica napus HOM05D000848 ORTHO05D003342 5.8e-18 94.4 81 56.8
C07p58790 Brassica napus HOM05D000848 ORTHO05D003342 5.8e-18 94.4 70 61.4
BolC4t27202H Brassica oleracea HOM05D000848 ORTHO05D003342 5.8e-18 94.4 81 56.8
BcaC07g39283 Brassica carinata HOM05D000848 ORTHO05D003342 1.3e-17 93.2 82 57.3
BolC7t46327H Brassica oleracea HOM05D000848 ORTHO05D003342 1.7e-17 92.8 59 69.5
C08p45890 Brassica napus HOM05D000848 ORTHO05D003342 2.9e-17 92.0 53 75.5
BolC8t51574H Brassica oleracea HOM05D000848 ORTHO05D003342 2.9e-17 92.0 53 75.5
BolC8t52141H Brassica oleracea HOM05D000848 ORTHO05D003342 2.9e-17 92.0 53 75.5
A08p36780 Brassica napus HOM05D006492 ORTHO05D008432 4.9e-17 91.3 58 69.0
C08p40030 Brassica napus HOM05D000848 ORTHO05D003342 4.9e-17 91.3 68 60.3
BolC3t15415H Brassica oleracea HOM05D000848 ORTHO05D003342 1.1e-16 90.1 61 67.2
C01p47370 Brassica napus HOM05D000848 ORTHO05D003342 1.4e-16 89.7 61 65.6
C02p59740 Brassica napus HOM05D000848 ORTHO05D003342 1.4e-16 89.7 61 65.6
C05p03590 Brassica napus HOM05D000848 ORTHO05D023963 1.4e-16 89.7 61 65.6
BolC5t29138H Brassica oleracea HOM05D000848 ORTHO05D003342 1.4e-16 89.7 61 65.6
C03p85290 Brassica napus HOM05D000848 ORTHO05D003342 5.5e-16 87.8 53 71.7
BraA08t34208Z Brassica rapa HOM05D000848 ORTHO05D003342 2.1e-15 85.9 63 58.7
BcaC01g06423 Brassica carinata HOM05D000848 ORTHO05D020139 2.3e-14 82.4 77 49.4
C01p15420 Brassica napus HOM05D000848 ORTHO05D003342 3.9e-14 81.6 91 46.2
BolC1t01496H Brassica oleracea HOM05D000848 ORTHO05D003342 3.9e-14 81.6 91 46.2
BolC8t47913H Brassica oleracea HOM05D000848 ORTHO05D003342 3.9e-14 81.6 48 75.0
A08p18660 Brassica napus HOM05D008189 ORTHO05D020139 1.1e-13 80.1 56 58.9
BraA03t10758Z Brassica rapa HOM05D008189 ORTHO05D020139 1.1e-13 80.1 56 58.9
Carub.0002s1565 Capsella rubella HOM05D000848 ORTHO05D003342 1.5e-13 79.7 75 50.7
BcaNung00302 Brassica carinata HOM05D008189 ORTHO05D012600 3.3e-13 78.6 103 39.8
A09p10540 Brassica napus HOM05D000848 ORTHO05D003342 4.3e-13 78.2 53 60.4
Carub.0001s1624 Capsella rubella HOM05D000848 ORTHO05D003342 4.3e-13 78.2 75 50.7
Thhalv10019607m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 4.8e-12 74.7 105 40.0
BcaB03g13249 Brassica carinata HOM05D008189 ORTHO05D012600 6.2e-12 74.3 89 40.4
CARHR183910 Cardamine hirsuta HOM05D000848 ORTHO05D000007 8.2e-12 73.9 49 61.2
BcaC07g37825 Brassica carinata HOM05D000848 ORTHO05D014957 1.4e-11 73.2 89 40.4
BcaC09g50217 Brassica carinata HOM05D000848 ORTHO05D014957 1.8e-11 72.8 89 40.4
A02p32130 Brassica napus HOM05D000848 ORTHO05D020100 1.8e-11 72.8 52 53.8
A06p43830 Brassica napus HOM05D000848 ORTHO05D003342 1.8e-11 72.8 52 53.8
Carub.0002s0549 Capsella rubella HOM05D000848 ORTHO05D003342 1.8e-11 72.8 90 42.2
Sp7g06180 Schrenkiella parvula HOM05D000399 ORTHO05D000304 1.8e-11 72.8 79 46.8
BolC2t07668H Brassica oleracea HOM05D000848 ORTHO05D003342 2.4e-11 72.4 91 42.9
A01p22250 Brassica napus HOM05D000848 ORTHO05D014957 4.0e-11 71.6 91 38.5
A03p29750 Brassica napus HOM05D000848 ORTHO05D003342 4.0e-11 71.6 64 48.4
BolC2t11262H Brassica oleracea HOM05D000848 ORTHO05D003342 4.0e-11 71.6 50 58.0
BraA01t02138Z Brassica rapa HOM05D000848 ORTHO05D014957 4.0e-11 71.6 91 38.5
Carub.0007s3131 Capsella rubella HOM05D000848 ORTHO05D003342 5.3e-11 71.2 90 40.0
BcaC03g15817 Brassica carinata HOM05D000848 ORTHO05D014957 6.9e-11 70.9 89 40.4
BcaC03g15818 Brassica carinata HOM05D000848 ORTHO05D014957 6.9e-11 70.9 89 40.4
C02p54660 Brassica napus HOM05D000848 ORTHO05D011438 6.9e-11 70.9 58 53.4
Thhalv10029211m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 6.9e-11 70.9 57 52.6
AT2G07760 Arabidopsis thaliana HOM05D000848 ORTHO05D003342 1.2e-10 70.1 50 58.0
Thhalv10019699m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 1.2e-10 70.1 79 43.0
BolC1t02710H Brassica oleracea HOM05D000848 ORTHO05D014957 1.5e-10 69.7 50 58.0
BolC2t10357H Brassica oleracea HOM05D008189 ORTHO05D003342 1.5e-10 69.7 89 39.3
Thhalv10005348m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 1.5e-10 69.7 50 58.0
Thhalv10029505m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 1.5e-10 69.7 100 37.0
BcaC06g30921 Brassica carinata HOM05D000848 ORTHO05D018560 2.0e-10 69.3 50 52.0
C06p06600 Brassica napus HOM05D000848 ORTHO05D014957 2.0e-10 69.3 89 39.3
BolC6t35773H Brassica oleracea HOM05D000848 ORTHO05D014957 2.0e-10 69.3 89 39.3
Thhalv10026463m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 2.0e-10 69.3 78 42.3
Thhalv10026798m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 2.6e-10 68.9 52 55.8
BcaC08g43312 Brassica carinata HOM05D000848 ORTHO05D014957 3.4e-10 68.6 89 39.3
C04p18710 Brassica napus HOM05D000848 ORTHO05D003342 3.4e-10 68.6 92 37.0
BolC1t01664H Brassica oleracea HOM05D008189 ORTHO05D003342 3.4e-10 68.6 92 39.1
Thhalv10006382m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 3.4e-10 68.6 78 42.3
Thhalv10019718m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 5.8e-10 67.8 98 37.8
C02p51770 Brassica napus HOM05D000848 ORTHO05D003342 7.6e-10 67.4 50 56.0
C03p84600 Brassica napus HOM05D018375 ORTHO05D021816 1.0e-09 67.0 63 54.0
C09p24120 Brassica napus HOM05D000848 ORTHO05D018553 1.0e-09 67.0 93 37.6
BolC3t20749H Brassica oleracea HOM05D018375 ORTHO05D021816 1.0e-09 67.0 63 54.0
AL6G40690 Arabidopsis lyrata HOM05D000848 ORTHO05D003342 1.3e-09 66.6 84 40.5
C01p27780 Brassica napus HOM05D000848 ORTHO05D014957 1.3e-09 66.6 50 56.0
A04p17460 Brassica napus HOM05D000848 ORTHO05D003342 2.9e-09 65.5 50 54.0
C02p35620 Brassica napus HOM05D000848 ORTHO05D014957 2.9e-09 65.5 85 38.8
BraA04t17369Z Brassica rapa HOM05D000848 ORTHO05D016609 2.9e-09 65.5 50 54.0
C04p18840 Brassica napus HOM05D000848 ORTHO05D003342 4.9e-09 64.7 50 54.0
Thhalv10009948m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 6.5e-09 64.3 53 50.9
AL5G27290 Arabidopsis lyrata HOM05D008189 ORTHO05D016609 8.4e-09 63.9 50 54.0
C08p48880 Brassica napus HOM05D000848 ORTHO05D003342 1.1e-08 63.5 50 52.0
BcaC04g21741 Brassica carinata HOM05D008189 ORTHO05D018627 1.4e-08 63.2 92 33.7
BolC5t31924H Brassica oleracea HOM05D015390 ORTHO05D018553 2.5e-08 62.4 68 42.6
A07p20800 Brassica napus HOM05D001943 ORTHO05D001969 4.2e-08 61.6 49 55.1
A07p10430 Brassica napus HOM05D000848 ORTHO05D011438 5.5e-08 61.2 53 49.1
C02p55550 Brassica napus HOM05D000848 ORTHO05D011438 5.5e-08 61.2 53 49.1
C03p07760 Brassica napus HOM05D000848 ORTHO05D011438 5.5e-08 61.2 53 49.1
BraA03t10164Z Brassica rapa HOM05D000848 ORTHO05D011438 5.5e-08 61.2 53 49.1
BraA08t33188Z Brassica rapa HOM05D000848 ORTHO05D011438 5.5e-08 61.2 53 49.1
Thhalv10024110m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 7.1e-08 60.8 79 41.8
C03p29700 Brassica napus HOM05D000848 ORTHO05D011438 1.2e-07 60.1 53 49.1
A06p41670 Brassica napus HOM05D000848 ORTHO05D003342 1.0e-06 57.0 52 57.7
BraA06t27092Z Brassica rapa HOM05D000792 ORTHO05D001021 1.0e-06 57.0 52 57.7
BolC7t45760H Brassica oleracea HOM05D000848 ORTHO05D000007 1.3e-06 56.6 42 52.4
THA.LOC104804647 Tarenaya hassleriana HOM05D000848 ORTHO05D000007 3.0e-06 55.5 57 42.1
THA.LOC104808465 Tarenaya hassleriana HOM05D000848 ORTHO05D000007 3.0e-06 55.5 57 42.1
BolC2t08260H Brassica oleracea HOM05D003728 ORTHO05D000007 5.1e-06 54.7 96 32.3
AL481U10020 Arabidopsis lyrata HOM05D003728 ORTHO05D000007 8.7e-06 53.9 58 39.7
BcaB05g22525 Brassica carinata HOM05D000848 ORTHO05D000007 8.7e-06 53.9 103 31.1
BcaC06g34547 Brassica carinata HOM05D003728 ORTHO05D000006 8.7e-06 53.9 94 30.9
BolC3t18695H Brassica oleracea HOM05D003728 ORTHO05D000007 8.7e-06 53.9 96 31.2
Dinv02631 Davidia involucrata HOM05D000003 ORTHO05D000007 8.7e-06 53.9 59 39.0


User provided reference genes

Program Settings