Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p08070 Brassica napus HOM05D008274 ORTHO05D010930 3.1e-40 167.9 79 100.0
BraA01t00752Z Brassica rapa HOM05D008274 ORTHO05D010930 4.0e-40 167.5 79 98.7
BcaC09g52235 Brassica carinata HOM05D008274 ORTHO05D010930 8.6e-35 149.8 79 87.3
BolC1t00895H Brassica oleracea HOM05D008274 ORTHO05D010930 1.5e-26 122.5 82 75.6
Thhalv10027526m.g Eutrema salsugineum HOM05D008274 ORTHO05D010930 1.5e-26 122.5 75 73.3
AT2G29045 Arabidopsis thaliana HOM05D008274 ORTHO05D010930 3.8e-22 107.8 79 60.8
Carub.0004s1003 Capsella rubella HOM05D008274 ORTHO05D010930 4.9e-22 107.5 79 60.8
AT4G30064 Arabidopsis thaliana HOM05D008274 ORTHO05D010930 2.4e-21 105.1 75 62.7
AL7G22160 Arabidopsis lyrata HOM05D008274 ORTHO05D010930 7.1e-21 103.6 75 60.0
AT4G30067 Arabidopsis thaliana HOM05D008274 ORTHO05D010930 2.1e-20 102.1 79 59.5
Carub.0007s1057 Capsella rubella HOM05D008274 ORTHO05D010930 3.3e-18 94.7 76 56.6
Thhalv10027260m.g Eutrema salsugineum HOM05D008274 ORTHO05D010930 7.3e-18 93.6 79 50.6
Carub.0007s1056 Capsella rubella HOM05D008274 ORTHO05D010930 2.8e-17 91.7 79 55.7
BraA09t36919Z Brassica rapa HOM05D008274 ORTHO05D010930 4.5e-15 84.3 80 48.8
Thhalv10026709m.g Eutrema salsugineum HOM05D008274 ORTHO05D010930 1.3e-14 82.8 81 53.1
Sp7g27860 Schrenkiella parvula HOM05D008274 ORTHO05D024519 1.7e-14 82.4 79 48.1
AL3G47880 Arabidopsis lyrata HOM05D008274 ORTHO05D010930 3.8e-14 81.3 74 54.1
A09p12750 Brassica napus HOM05D008274 ORTHO05D010930 1.1e-13 79.7 80 46.2
Sp3g33440 Schrenkiella parvula HOM05D008274 ORTHO05D010930 5.4e-13 77.4 72 52.8
Thhalv10027161m.g Eutrema salsugineum HOM05D008274 ORTHO05D010930 9.3e-13 76.6 79 46.8
AL7G22150 Arabidopsis lyrata HOM05D008274 ORTHO05D010930 2.1e-12 75.5 47 66.0
Carub.0003s3453 Capsella rubella HOM05D008274 ORTHO05D010930 3.5e-12 74.7 73 50.7
BolC2t08191H Brassica oleracea HOM05D008274 ORTHO05D010930 7.9e-12 73.6 79 48.1
Thhalv10002176m.g Eutrema salsugineum HOM05D008274 ORTHO05D010930 7.9e-12 73.6 72 50.0
Sp7g27910 Schrenkiella parvula HOM05D008274 ORTHO05D033960 7.9e-12 73.6 76 46.1
BcaB05g24016 Brassica carinata HOM05D008274 ORTHO05D010930 1.0e-11 73.2 79 46.8
Aa31LG2G20510 Aethionema arabicum HOM05D008274 ORTHO05D010930 1.8e-11 72.4 58 51.7
C02p20550 Brassica napus HOM05D008274 ORTHO05D010930 1.8e-11 72.4 79 46.8
A02p12430 Brassica napus HOM05D008274 ORTHO05D010930 5.1e-11 70.9 79 46.8
BraA02t06307Z Brassica rapa HOM05D008274 ORTHO05D010930 5.1e-11 70.9 79 46.8
CARHR101100 Cardamine hirsuta HOM05D008274 ORTHO05D010930 6.7e-11 70.5 80 45.0
Thhalv10028327m.g Eutrema salsugineum HOM05D008274 ORTHO05D010930 1.1e-10 69.7 79 48.1
AT2G20208 Arabidopsis thaliana HOM05D008274 ORTHO05D010930 1.9e-10 68.9 74 45.9
Thhalv10026917m.g Eutrema salsugineum HOM05D008274 ORTHO05D033960 1.9e-10 68.9 76 44.7
C02p05610 Brassica napus HOM05D008274 ORTHO05D024519 4.3e-10 67.8 79 46.8
BolC2t06505H Brassica oleracea HOM05D008274 ORTHO05D024519 4.3e-10 67.8 79 46.8
A06p37540 Brassica napus HOM05D008274 ORTHO05D020184 1.6e-09 65.9 70 44.3
BraA06t26676Z Brassica rapa HOM05D008274 ORTHO05D020184 1.6e-09 65.9 70 44.3
C07p40820 Brassica napus HOM05D008274 ORTHO05D020184 2.1e-09 65.5 70 44.3
BcaNung04094 Brassica carinata HOM05D008274 ORTHO05D010930 3.7e-09 64.7 60 48.3
A02p26220 Brassica napus HOM05D008274 ORTHO05D020184 6.2e-09 63.9 69 43.5
BraA02t07623Z Brassica rapa HOM05D008274 ORTHO05D020184 6.2e-09 63.9 69 43.5
A02p01370 Brassica napus HOM05D008274 ORTHO05D024519 8.1e-09 63.5 79 44.3
BraA02t05116Z Brassica rapa HOM05D008274 ORTHO05D024519 8.1e-09 63.5 79 44.3
CARHR101110 Cardamine hirsuta HOM05D008274 ORTHO05D010930 1.1e-08 63.2 70 44.3
Thhalv10002324m.g Eutrema salsugineum HOM05D008274 ORTHO05D010930 1.8e-08 62.4 83 41.0
A04p10580 Brassica napus HOM05D008274 ORTHO05D010930 2.4e-08 62.0 82 42.7
C04p44220 Brassica napus HOM05D008274 ORTHO05D010930 5.3e-08 60.8 82 42.7
Aa31LG2G20500 Aethionema arabicum HOM05D008274 ORTHO05D010930 1.2e-07 59.7 57 42.1
BcaC04g22812 Brassica carinata HOM05D008274 ORTHO05D010930 2.0e-07 58.9 68 41.2
BolC9t54416H Brassica oleracea HOM05D008274 ORTHO05D010930 2.0e-07 58.9 68 41.2
C03p56480 Brassica napus HOM05D011508 ORTHO05D020194 2.6e-07 58.5 71 43.7
A03p45500 Brassica napus HOM05D011508 ORTHO05D020194 5.8e-07 57.4 71 42.3
C03p56540 Brassica napus HOM05D011508 ORTHO05D017548 5.8e-07 57.4 71 43.7
BolC3t17940H Brassica oleracea HOM05D011508 ORTHO05D017548 5.8e-07 57.4 71 43.7
A08p30050 Brassica napus HOM05D008274 ORTHO05D028205 1.3e-06 56.2 77 44.2
C03p56450 Brassica napus HOM05D011508 ORTHO05D020194 1.3e-06 56.2 71 40.8
BraA08t34940Z Brassica rapa HOM05D008274 ORTHO05D028205 1.3e-06 56.2 77 44.2
BolC7t44604H Brassica oleracea HOM05D008274 ORTHO05D020184 1.7e-06 55.8 56 48.2
C07p40790 Brassica napus HOM05D008274 ORTHO05D020184 2.2e-06 55.5 70 40.0
C08p19140 Brassica napus HOM05D008274 ORTHO05D028205 2.2e-06 55.5 78 44.9
C09p15110 Brassica napus HOM05D008274 ORTHO05D010930 2.9e-06 55.1 60 41.7
A03p45530 Brassica napus HOM05D011508 ORTHO05D020194 6.4e-06 53.9 71 42.3
C08p19110 Brassica napus HOM05D008274 ORTHO05D028205 6.4e-06 53.9 78 43.6
BraA03t13685Z Brassica rapa HOM05D011508 ORTHO05D020194 6.4e-06 53.9 71 42.3


User provided reference genes

Program Settings