Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p07560 Brassica napus HOM05D008365 ORTHO05D011149 9.4e-142 506.9 268 100.0
BcaC09g51862 Brassica carinata HOM05D008365 ORTHO05D011149 1.6e-128 463.0 268 88.8
BraA01t00699Z Brassica rapa HOM05D008365 ORTHO05D011149 2.3e-127 459.1 249 98.4
C01p08200 Brassica napus HOM05D008365 ORTHO05D011149 5.6e-118 427.9 249 92.8
BolC1t00807H Brassica oleracea HOM05D008365 ORTHO05D011149 4.7e-117 424.9 249 88.4
Sp7g27580 Schrenkiella parvula HOM05D008365 ORTHO05D011149 1.0e-71 274.2 272 53.3
BraA08t33873Z Brassica rapa HOM05D008365 ORTHO05D011149 3.3e-70 269.2 271 50.6
BcaB03g12656 Brassica carinata HOM05D008365 ORTHO05D011149 5.6e-70 268.5 272 50.7
A08p19110 Brassica napus HOM05D008365 ORTHO05D011149 1.3e-69 267.3 271 50.9
A08p19120 Brassica napus HOM05D008365 ORTHO05D011149 3.7e-69 265.8 272 54.4
BcaC01g01143 Brassica carinata HOM05D008365 ORTHO05D011149 5.5e-65 251.9 271 51.7
C03p88570 Brassica napus HOM05D008365 ORTHO05D011149 9.3e-65 251.1 249 49.8
Thhalv10026005m.g Eutrema salsugineum HOM05D008365 ORTHO05D011149 1.0e-63 247.7 268 54.9
C03p88590 Brassica napus HOM05D008365 ORTHO05D011149 1.1e-62 244.2 273 53.5
BcaB03g12655 Brassica carinata HOM05D008365 ORTHO05D011149 2.5e-62 243.0 274 47.1
BraA08t33874Z Brassica rapa HOM05D008365 ORTHO05D011149 4.8e-61 238.8 273 49.5
A08p19130 Brassica napus HOM05D008365 ORTHO05D011149 2.4e-60 236.5 273 51.6
AL7G22500 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 2.2e-58 229.9 264 49.6
Carub.0004s1486 Capsella rubella HOM05D008365 ORTHO05D011149 2.2e-58 229.9 263 48.3
BcaNung02965 Brassica carinata HOM05D008365 ORTHO05D011149 5.0e-58 228.8 178 67.4
AL6G29230 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 6.5e-58 228.4 264 48.9
AT4G29770 Arabidopsis thaliana HOM05D008365 ORTHO05D011149 1.9e-57 226.9 264 46.2
AL6G29250 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 3.2e-57 226.1 264 47.7
Thhalv10027444m.g Eutrema salsugineum HOM05D008365 ORTHO05D011149 4.2e-57 225.7 274 51.5
Carub.0008s0192 Capsella rubella HOM05D008365 ORTHO05D011149 5.5e-57 225.3 263 49.0
Carub.0004s1487 Capsella rubella HOM05D008365 ORTHO05D011149 6.7e-55 218.4 266 44.7
AT4G29760 Arabidopsis thaliana HOM05D008365 ORTHO05D011149 3.3e-54 216.1 264 46.6
AL7G22480 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 4.3e-54 215.7 264 48.1
CARHR215270 Cardamine hirsuta HOM05D008365 ORTHO05D011149 6.3e-53 211.8 263 46.0
AL7G22490 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 1.1e-52 211.1 265 47.2
A07p02810 Brassica napus HOM05D008365 ORTHO05D011149 3.4e-51 206.1 283 42.8
BraA07t28079Z Brassica rapa HOM05D008365 ORTHO05D011149 3.4e-51 206.1 283 42.8
C03p88560 Brassica napus HOM05D008365 ORTHO05D011149 9.4e-49 198.0 296 39.5
Thhalv10011766m.g Eutrema salsugineum HOM05D008365 ORTHO05D011149 6.5e-42 175.3 268 42.2
CARHR251110 Cardamine hirsuta HOM05D008365 ORTHO05D011149 2.5e-41 173.3 251 39.8
CARHR237670 Cardamine hirsuta HOM05D008365 ORTHO05D011149 1.8e-36 157.1 268 37.7
AL1G54760 Arabidopsis lyrata HOM05D008365 ORTHO05D014862 5.3e-36 155.6 255 39.2
CARHR163030 Cardamine hirsuta HOM05D008365 ORTHO05D014862 9.1e-36 154.8 257 39.7
Carub.0001s4052 Capsella rubella HOM05D008365 ORTHO05D014862 1.0e-34 151.4 252 40.5
AL1G61110 Arabidopsis lyrata HOM05D008365 ORTHO05D014862 2.9e-34 149.8 255 38.4
Carub.0001s4054 Capsella rubella HOM05D008365 ORTHO05D014862 7.2e-33 145.2 251 37.8
Carub.0001s4053 Capsella rubella HOM05D008365 ORTHO05D014862 1.0e-31 141.4 255 37.3
AL1G59580 Arabidopsis lyrata HOM05D008365 ORTHO05D014862 6.3e-29 132.1 251 37.1
AT1G48180 Arabidopsis thaliana HOM05D008365 ORTHO05D014862 8.3e-29 131.7 251 35.9
CARHR263650 Cardamine hirsuta HOM05D008365 ORTHO05D014862 7.7e-27 125.2 242 36.0
CARHR063700 Cardamine hirsuta HOM05D008365 ORTHO05D014862 5.0e-26 122.5 250 33.6
BolC3t21165H Brassica oleracea HOM05D008365 ORTHO05D011149 3.6e-24 116.3 133 51.9
CARHR063260 Cardamine hirsuta HOM05D008365 ORTHO05D014862 6.1e-24 115.5 253 32.4
CARHR063690 Cardamine hirsuta HOM05D008365 ORTHO05D014862 6.1e-24 115.5 250 32.8
CARHR063300 Cardamine hirsuta HOM05D008365 ORTHO05D116364 6.6e-18 95.5 122 45.9
AT5G18040 Arabidopsis thaliana HOM05D008365 ORTHO05D081110 1.6e-16 90.9 183 32.2
AT5G18065 Arabidopsis thaliana HOM05D008365 ORTHO05D011149 5.2e-15 85.9 96 46.9
AT1G51670 Arabidopsis thaliana HOM05D008365 ORTHO05D014862 8.3e-13 78.6 168 35.1
A01p08230 Brassica napus HOM05D016251 ORTHO05D017520 1.4e-12 77.8 203 33.5
BraA01t00768Z Brassica rapa HOM05D016251 ORTHO05D017520 1.4e-12 77.8 203 33.5
BcaC09g51771 Brassica carinata HOM05D016251 ORTHO05D017520 5.4e-12 75.9 254 29.1
AL5G23100 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 2.0e-11 73.9 144 33.3
BcaC09g52200 Brassica carinata HOM05D016251 ORTHO05D017520 2.0e-11 73.9 203 31.5
C01p09200 Brassica napus HOM05D016251 ORTHO05D017520 2.0e-11 73.9 203 31.5
BcaNung01345 Brassica carinata HOM05D008615 ORTHO05D021443 4.5e-11 72.8 252 28.2
CARHR237830 Cardamine hirsuta HOM05D008365 ORTHO05D017520 1.9e-09 67.4 275 26.9
Carub.0007s2333 Capsella rubella HOM05D000344 ORTHO05D003292 5.6e-09 65.9 248 25.0
Thhalv10000684m.g Eutrema salsugineum HOM05D008365 ORTHO05D017520 7.3e-09 65.5 226 27.9
Thhalv10026918m.g Eutrema salsugineum HOM05D008615 ORTHO05D011779 3.6e-08 63.2 251 24.7
AL7G23550 Arabidopsis lyrata HOM05D008615 ORTHO05D021443 2.3e-07 60.5 248 25.4
CARHR063270 Cardamine hirsuta HOM05D008365 ORTHO05D116001 3.1e-07 60.1 82 42.7
AL7G36450 Arabidopsis lyrata HOM05D013859 ORTHO05D018433 6.8e-07 58.9 140 30.7
AL7G22840 Arabidopsis lyrata HOM05D008615 ORTHO05D011779 2.6e-06 57.0 215 26.0
Carub.0007s1099 Capsella rubella HOM05D008615 ORTHO05D011779 3.4e-06 56.6 218 25.7


User provided reference genes

Program Settings