Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p07190 Brassica napus HOM05D003067 ORTHO05D009378 6.7e-162 573.9 286 100.0
BraA01t00670Z Brassica rapa HOM05D003067 ORTHO05D009378 1.7e-157 559.3 286 97.9
C01p07950 Brassica napus HOM05D003067 ORTHO05D009378 9.4e-156 553.5 286 96.9
BolC1t00782H Brassica oleracea HOM05D003067 ORTHO05D009378 9.4e-156 553.5 286 96.9
BcaC09g51887 Brassica carinata HOM05D003067 ORTHO05D009378 8.8e-154 547.0 286 95.5
BcaNung03423 Brassica carinata HOM05D003067 ORTHO05D009378 3.2e-140 501.9 286 87.1
Sp7g28870 Schrenkiella parvula HOM05D003067 ORTHO05D009378 1.3e-133 479.9 287 82.9
Thhalv10025917m.g Eutrema salsugineum HOM05D003067 ORTHO05D009378 2.7e-131 472.2 286 80.4
AL7G21080 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 8.6e-125 450.7 287 77.0
Carub.0007s0954 Capsella rubella HOM05D003067 ORTHO05D009378 1.7e-117 426.4 287 75.3
AT4G30993 Arabidopsis thaliana HOM05D003067 ORTHO05D009378 1.1e-84 317.4 206 75.2
THA.LOC104803568 Tarenaya hassleriana HOM05D003067 ORTHO05D009378 5.3e-82 308.5 291 54.3
CARHR238890 Cardamine hirsuta HOM05D003067 ORTHO05D009378 3.7e-67 259.2 168 76.2
QL02p092630 Quercus lobata HOM05D003067 ORTHO05D009378 1.2e-57 227.6 305 43.0
Thecc.09G033900 Theobroma cacao HOM05D003067 ORTHO05D009378 1.7e-56 223.8 293 43.7
Ciclev10009097m.g Citrus clementina HOM05D003067 ORTHO05D009378 7.9e-54 214.9 291 42.3
Atru.chr7.146 Acer truncatum HOM05D003067 ORTHO05D009378 1.8e-53 213.8 282 41.1
CiPaw.16G115000 Carya illinoinensis HOM05D003067 ORTHO05D009378 1.1e-52 211.1 293 41.6
Hma1.2p1_0028F.1_g017380 Hydrangea macrophylla HOM05D003067 ORTHO05D009378 3.3e-52 209.5 288 42.4
Eucgr.C00366 Eucalyptus grandis HOM05D003067 ORTHO05D009378 4.3e-52 209.1 297 40.4
Cfa020848 Carpinus fangiana HOM05D003067 ORTHO05D007251 7.4e-52 208.4 275 42.5
Haze_19237 Corylus avellana HOM05D003067 ORTHO05D009378 2.8e-51 206.5 326 37.4
Gohir.D07G030100 Gossypium hirsutum HOM05D003067 ORTHO05D009378 3.7e-51 206.1 290 40.7
Prupe.7G260000 Prunus persica HOM05D003067 ORTHO05D009378 4.8e-51 205.7 287 41.1
RcHm_v2.0_Chr2g0085991 Rosa chinensis HOM05D003067 ORTHO05D009378 6.3e-51 205.3 289 41.5
FvH4_1g01190 Fragaria vesca HOM05D003067 ORTHO05D009378 1.4e-50 204.1 293 41.3
FAN28G0267 Fragaria x ananassa HOM05D003067 ORTHO05D009378 4.1e-50 202.6 295 42.4
Gorai.001G031300 Gossypium raimondii HOM05D003067 ORTHO05D009378 1.2e-49 201.1 291 40.5
Gohir.A07G026200 Gossypium hirsutum HOM05D003067 ORTHO05D009378 1.5e-49 200.7 290 40.0
TWI34G0508 Tripterygium wilfordii HOM05D003067 ORTHO05D009378 2.6e-49 199.9 304 40.5
GSVIVG01003733001 Vitis vinifera HOM05D003067 ORTHO05D009378 1.9e-47 193.7 280 40.7
Cc06_g15260 Coffea canephora HOM05D003067 ORTHO05D009378 4.2e-47 192.6 299 40.5
Potri.018G110300 Populus trichocarpa HOM05D003067 ORTHO05D009378 9.4e-47 191.4 299 37.1
Dinv41400 Davidia involucrata HOM05D003067 ORTHO05D009378 3.6e-46 189.5 273 40.7
CANSAT11G2322 Cannabis sativa HOM05D003067 ORTHO05D009378 1.8e-45 187.2 294 37.4
Medtr2g450220 Medicago truncatula HOM05D003067 ORTHO05D009378 2.3e-45 186.8 301 36.9
Potri.006G187500 Populus trichocarpa HOM05D003067 ORTHO05D009378 6.7e-45 185.3 300 37.0
PGR142G2789 Punica granatum HOM05D003067 ORTHO05D009378 1.7e-43 180.6 304 36.5
MBI14_g05269_MAGBIO Magnolia biondii HOM05D003067 ORTHO05D009378 3.7e-43 179.5 280 38.9
Oeu021253.1 Olea europaea HOM05D003067 ORTHO05D009378 8.2e-43 178.3 297 37.0
Aqoxy7G03467 Aquilegia oxysepala HOM05D003067 ORTHO05D009378 2.6e-41 173.3 298 35.6
Nn2g12305 Nelumbo nucifera HOM05D003067 ORTHO05D009378 5.9e-41 172.2 295 36.3
Os06g0183700 Oryza sativa ssp. japonica HOM05D003067 ORTHO05D009378 5.0e-40 169.1 299 33.8
COL.COLO4_18774 Corchorus olitorius HOM05D003067 ORTHO05D009378 6.5e-40 168.7 276 39.5
Rhsim03G0256100 Rhododendron simsii HOM05D003779 ORTHO05D002678 6.5e-40 168.7 290 36.9
CDE06G1077 Ceratophyllum demersum HOM05D003067 ORTHO05D009378 5.5e-39 165.6 297 35.0
CsaV3_2G003640 Cucumis sativus L. HOM05D003067 ORTHO05D009378 5.5e-39 165.6 289 33.6
MSTRG.6118 Avicennia marina HOM05D003067 ORTHO05D009378 7.2e-39 165.2 292 34.9
ClCG02G017140 Citrullus lanatus HOM05D003067 ORTHO05D009378 7.2e-39 165.2 312 32.4
Nitab4.5_0001478g0120 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.4e-37 161.0 293 34.5
ATR1153G020 Amborella trichopoda HOM05D003067 ORTHO05D009378 5.2e-37 159.1 284 37.7
CAN.G551.28 Capsicum annuum HOM05D003067 ORTHO05D009378 8.8e-37 158.3 293 33.4
FAN23G1864 Fragaria x ananassa HOM05D003779 ORTHO05D002678 4.4e-36 156.0 194 44.3
Actinidia38680 Actinidia chinensis HOM05D003067 ORTHO05D009378 7.4e-36 155.2 245 38.4
MELO3C004431.2 Cucumis melo HOM05D003067 ORTHO05D009378 6.3e-35 152.1 318 31.1
AL2G22600 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 8.2e-35 151.8 100 72.0
AL6G46700 Arabidopsis lyrata HOM05D003067 ORTHO05D009378 1.1e-34 151.4 100 72.0
Lj6g0006451 Lotus japonicus HOM05D003067 ORTHO05D009378 1.1e-34 151.4 292 33.6
HanXRQChr05g0133261 Helianthus annuus HOM05D003067 ORTHO05D009378 1.4e-34 151.0 291 33.0
Duzib150G0133 Durio zibethinus HOM05D003067 ORTHO05D009378 1.8e-34 150.6 228 38.2
Migut.J01329 Erythranthe guttata HOM05D003067 ORTHO05D009378 1.6e-33 147.5 291 33.3
Oeu043496.1 Olea europaea HOM05D003067 ORTHO05D009378 1.6e-33 147.5 288 33.3
Sabra18G0093300 Salix brachista HOM05D003067 ORTHO05D009378 2.0e-33 147.1 364 30.2
Oeu043497.1 Olea europaea HOM05D003067 ORTHO05D009378 2.6e-33 146.7 288 33.3
Manes.14G112000 Manihot esculenta HOM05D003067 ORTHO05D009378 3.5e-33 146.4 224 36.6
Zm00001eb374750 Zea mays HOM05D003067 ORTHO05D009378 2.9e-32 143.3 287 32.1
SGA_v2.0_scaffold265G46124 Striga asiatica HOM05D003067 ORTHO05D009378 4.2e-31 139.4 287 33.1
HPP92_017493 Vanilla planifolia HOM05D003067 ORTHO05D009378 2.7e-30 136.7 292 34.9
Sopen12g005120 Solanum pennellii HOM05D003067 ORTHO05D009378 6.1e-30 135.6 253 33.6
Peaxi162Scf00108g00714 Petunia axillaris HOM05D003067 ORTHO05D009378 1.8e-29 134.0 298 30.5
Solyc12g010230.2 Solanum lycopersicum HOM05D003067 ORTHO05D009378 3.0e-29 133.3 258 32.2
FAN19G0469 Fragaria x ananassa HOM05D003067 ORTHO05D009378 4.0e-29 132.9 173 44.5
Nitab4.5_0002315g0060 Nicotiana tabacum HOM05D003067 ORTHO05D009378 1.5e-28 131.0 284 33.1
Lsat_1_v5_gn_8_59821 Lactuca sativa HOM05D003067 ORTHO05D009378 1.3e-27 127.9 284 30.6
Cpa.g.sc46.125 Carica papaya HOM05D003067 ORTHO05D009378 3.7e-27 126.3 142 45.1
SalBow1G0452 Salvia bowleyana HOM05D003067 ORTHO05D009378 3.7e-27 126.3 296 31.1
MD02G1010100 Malus domestica HOM05D003067 ORTHO05D009378 1.2e-22 111.3 207 33.8
vmacro06093 Vaccinium macrocarpon HOM05D003067 ORTHO05D009378 1.2e-22 111.3 266 33.8
BolC4t23558H Brassica oleracea HOM05D003067 ORTHO05D009378 2.7e-22 110.2 142 49.3
Aa31LG2G19330 Aethionema arabicum HOM05D003067 ORTHO05D009378 7.5e-20 102.1 112 49.1
C04p20200 Brassica napus HOM05D003067 ORTHO05D009378 7.5e-20 102.1 107 57.0
DCAR_014819 Daucus carota HOM05D003067 ORTHO05D009378 1.3e-19 101.3 260 31.2
Glyma.15G205500 Glycine max HOM05D003067 ORTHO05D009378 3.7e-19 99.8 228 32.0
PGSC0003DMG400007894 Solanum tuberosum HOM05D003067 ORTHO05D009378 4.5e-17 92.8 183 35.0
MD02G1010000 Malus domestica HOM05D003067 ORTHO05D009378 9.5e-15 85.1 93 47.3
A08p18930 Brassica napus HOM05D003067 ORTHO05D009378 3.6e-14 83.2 60 73.3
Aa31LG2G19340 Aethionema arabicum HOM05D003067 ORTHO05D009378 4.1e-10 69.7 67 58.2
GSVIVG01003739001 Vitis vinifera HOM05D003067 ORTHO05D009378 4.1e-10 69.7 61 57.4
CSS0014498 Camellia sinensis var. sinensis HOM05D003067 ORTHO05D009378 5.6e-07 59.3 156 28.2


User provided reference genes

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