Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p06430 Brassica napus HOM05D006008 ORTHO05D007334 2.2e-197 693.7 917 100.0
BraA01t00604Z Brassica rapa HOM05D006008 ORTHO05D007334 3.4e-177 626.7 918 97.2
C01p07070 Brassica napus HOM05D006008 ORTHO05D007334 5.1e-165 586.3 920 93.9
BcaC09g51977 Brassica carinata HOM05D006008 ORTHO05D007334 3.5e-158 563.5 920 93.7
BolC1t00699H Brassica oleracea HOM05D006008 ORTHO05D007334 1.6e-150 538.1 919 92.3
BcaNung03118 Brassica carinata HOM05D006008 ORTHO05D007334 5.9e-105 386.7 293 84.0
C07p58920 Brassica napus HOM05D006008 ORTHO05D007334 7.2e-103 379.8 920 83.4
BolC7t46339H Brassica oleracea HOM05D006008 ORTHO05D007334 7.2e-103 379.8 920 83.4
A03p61020 Brassica napus HOM05D006008 ORTHO05D007334 3.9e-101 374.0 920 82.9
Thhalv10024264m.g Eutrema salsugineum HOM05D006008 ORTHO05D007334 1.3e-96 359.0 929 80.2
BraA03t15143Z Brassica rapa HOM05D006008 ORTHO05D007334 2.9e-96 357.8 920 79.7
Carub.0007s0870 Capsella rubella HOM05D006008 ORTHO05D007334 1.0e-93 349.4 929 79.5
AL7G20130 Arabidopsis lyrata HOM05D006008 ORTHO05D007334 1.3e-91 342.4 928 79.7
AT4G31850 Arabidopsis thaliana HOM05D006008 ORTHO05D007334 1.3e-88 332.4 927 79.8
Sp7g29660 Schrenkiella parvula HOM05D006008 ORTHO05D007334 2.5e-87 328.2 929 80.1
BcaNung01494 Brassica carinata HOM05D006008 ORTHO05D007334 2.7e-81 308.1 789 86.2
CARHR239780 Cardamine hirsuta HOM05D006008 ORTHO05D007334 2.2e-80 305.1 928 78.1
Aa31LG2G18380 Aethionema arabicum HOM05D006008 ORTHO05D007334 2.0e-76 292.0 822 81.9
THA.LOC104803618 Tarenaya hassleriana HOM05D006008 ORTHO05D007334 1.7e-56 225.7 924 71.2
BcaNung03117 Brassica carinata HOM05D006008 ORTHO05D007334 7.8e-49 200.3 153 74.5
Cfa013044 Carpinus fangiana HOM05D006008 ORTHO05D007334 7.1e-42 177.2 212 49.1
Dinv08184 Davidia involucrata HOM05D006008 ORTHO05D007334 2.1e-41 175.6 219 47.0
Sabra06G0206900 Salix brachista HOM05D006008 ORTHO05D007334 7.8e-41 173.7 219 46.6
Potri.006G264800 Populus trichocarpa HOM05D006008 ORTHO05D007334 1.0e-40 173.3 213 46.0
Haze_21405 Corylus avellana HOM05D006008 ORTHO05D007334 2.3e-40 172.2 204 49.0
Duzib187G0883 Durio zibethinus HOM05D006008 ORTHO05D007334 3.0e-40 171.8 211 46.9
arahy.Tifrunner.gnm1.ann1.6M8E1A Arachis hypogaea HOM05D006008 ORTHO05D007334 5.1e-40 171.0 210 47.6
Sed0007713 Sechium edule HOM05D006008 ORTHO05D007334 1.9e-39 169.1 180 47.8
arahy.Tifrunner.gnm1.ann1.HZWF25 Arachis hypogaea HOM05D006008 ORTHO05D007334 1.2e-38 166.4 189 49.7
MD08G1055800 Malus domestica HOM05D006008 ORTHO05D007334 1.6e-38 166.0 180 49.4
arahy.Tifrunner.gnm1.ann1.83E5X5 Arachis hypogaea HOM05D006008 ORTHO05D007334 2.1e-38 165.6 216 48.1
Thecc.09G015100 Theobroma cacao HOM05D006008 ORTHO05D007334 2.8e-38 165.2 216 46.8
Actinidia23109 Actinidia chinensis HOM05D006008 ORTHO05D007334 1.4e-37 162.9 211 44.5
Gorai.009G063400 Gossypium raimondii HOM05D006008 ORTHO05D007334 1.4e-37 162.9 216 44.4
Manes.08G047700 Manihot esculenta HOM05D006008 ORTHO05D007334 1.4e-37 162.9 219 45.2
Atru.chr7.2558 Acer truncatum HOM05D006008 ORTHO05D007334 1.8e-37 162.5 215 45.6
Migut.A00359 Erythranthe guttata HOM05D006008 ORTHO05D007334 3.1e-37 161.8 166 50.0
Gohir.D05G062300 Gossypium hirsutum HOM05D006008 ORTHO05D007334 3.1e-37 161.8 216 44.0
VMungo1309G2388 Vigna mungo HOM05D006008 ORTHO05D007334 4.0e-37 161.4 211 46.4
Phvul.009G086500 Phaseolus vulgaris HOM05D006008 ORTHO05D007334 5.2e-37 161.0 213 46.0
AUR62041936 Chenopodium quinoa HOM05D006008 ORTHO05D007334 6.9e-37 160.6 171 50.9
Glyma.06G061000 Glycine max HOM05D006008 ORTHO05D007334 8.9e-37 160.2 215 44.7
DCAR_022863 Daucus carota HOM05D006008 ORTHO05D007334 1.2e-36 159.8 223 45.7
Cpa.g.sc148.18 Carica papaya HOM05D006008 ORTHO05D007334 2.0e-36 159.1 215 45.6
MELO3C032315.2 Cucumis melo HOM05D006008 ORTHO05D007334 3.4e-36 158.3 166 51.2
Gohir.A05G060100 Gossypium hirsutum HOM05D006008 ORTHO05D007334 3.4e-36 158.3 213 41.8
QL02p018792 Quercus lobata HOM05D006008 ORTHO05D007334 4.4e-36 157.9 144 56.9
Medtr3g105900 Medicago truncatula HOM05D006008 ORTHO05D007334 7.6e-36 157.1 234 43.6
arahy.Tifrunner.gnm1.ann1.E59C1E Arachis hypogaea HOM05D006008 ORTHO05D007334 1.3e-35 156.4 199 48.2
ClCG05G016190 Citrullus lanatus HOM05D006008 ORTHO05D007334 1.3e-35 156.4 166 48.8
PSO384G1678 Papaver somniferum HOM05D006008 ORTHO05D007334 1.7e-35 156.0 165 49.1
TWI63G1661 Tripterygium wilfordii HOM05D006008 ORTHO05D007334 1.7e-35 156.0 220 43.6
SGA_v2.0_scaffold147G36344 Striga asiatica HOM05D006008 ORTHO05D007334 2.2e-35 155.6 188 46.3
FAN27G1628 Fragaria x ananassa HOM05D006008 ORTHO05D007334 3.8e-35 154.8 164 49.4
CANSAT54G1994 Cannabis sativa HOM05D006008 ORTHO05D007334 4.9e-35 154.5 217 43.8
FAN15G1576 Fragaria x ananassa HOM05D006008 ORTHO05D007334 4.9e-35 154.5 164 48.8
Lj7P735T18 Lonicera japonica HOM05D006008 ORTHO05D007334 4.9e-35 154.5 148 52.7
COL.COLO4_18956 Corchorus olitorius HOM05D006008 ORTHO05D007334 6.4e-35 154.1 158 51.3
Sc09g0010690 Simmondsia chinensis HOM05D006008 ORTHO05D007334 8.4e-35 153.7 156 50.0
vmacro05220 Vaccinium macrocarpon HOM05D006008 ORTHO05D007334 8.4e-35 153.7 219 42.9
FvH4_2g41180 Fragaria vesca HOM05D006008 ORTHO05D007334 1.1e-34 153.3 182 46.2
Prupe.1G394600 Prunus persica HOM05D006008 ORTHO05D007334 1.1e-34 153.3 206 46.1
FAN20G2406 Fragaria x ananassa HOM05D006008 ORTHO05D007334 1.4e-34 152.9 144 52.1
Lsat_1_v5_gn_2_36140 Lactuca sativa HOM05D006008 ORTHO05D007334 1.4e-34 152.9 180 42.8
CSS0033722 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.9e-34 152.5 212 42.5
Rhsim07G0155900 Rhododendron simsii HOM05D006008 ORTHO05D007334 1.9e-34 152.5 189 44.4
Lalb_Chr23g0268201 Lupinus albus HOM05D006008 ORTHO05D007334 3.2e-34 151.8 181 45.9
Hund20025 Selenicereus undatus HOM05D006008 ORTHO05D007334 7.1e-34 150.6 170 48.2
TAR362G1189 Trochodendron aralioides HOM05D006008 ORTHO05D007334 9.3e-34 150.2 218 43.1
Nn7g36097 Nelumbo nucifera HOM05D006008 ORTHO05D007334 1.2e-33 149.8 179 48.0
Aqoxy7G02519 Aquilegia oxysepala HOM05D006008 ORTHO05D007334 1.6e-33 149.4 219 42.9
CANSAT56G1562 Cannabis sativa HOM05D006008 ORTHO05D007334 3.5e-33 148.3 212 43.4
RcHm_v2.0_Chr6g0299351 Rosa chinensis HOM05D006008 ORTHO05D007334 3.5e-33 148.3 134 53.7
Ah.04g163370 Amaranthus hybridus HOM05D002153 ORTHO05D002137 4.6e-33 147.9 138 55.8
Glyma.04G060500 Glycine max HOM05D006008 ORTHO05D007334 4.6e-33 147.9 157 47.8
Ca_15782_v3 Cicer arietinum L. HOM05D006008 ORTHO05D007334 6.0e-33 147.5 223 42.2
Psat5g033520 Pisum sativum HOM05D006008 ORTHO05D007334 1.7e-32 146.0 220 40.5
TPR.G1871 Trifolium pratense HOM05D006008 ORTHO05D007334 1.7e-32 146.0 231 42.0
Cc08_g07210 Coffea canephora HOM05D006008 ORTHO05D007334 2.3e-32 145.6 176 47.7
Nitab4.5_0000147g0080 Nicotiana tabacum HOM05D006008 ORTHO05D007334 3.9e-32 144.8 190 43.2
ATR0580G290 Amborella trichopoda HOM05D006008 ORTHO05D007334 5.1e-32 144.4 148 49.3
CDE02G3851 Ceratophyllum demersum HOM05D006008 ORTHO05D007334 8.7e-32 143.7 137 52.6
Lj1g0008194 Lotus japonicus HOM05D006008 ORTHO05D007334 8.7e-32 143.7 151 47.0
Solyc04g015440.4 Solanum lycopersicum HOM05D006008 ORTHO05D007334 8.7e-32 143.7 180 42.8
SalBow4G1429 Salvia bowleyana HOM05D006008 ORTHO05D007334 1.1e-31 143.3 178 44.9
CsaV3_4G036480 Cucumis sativus L. HOM05D006008 ORTHO05D007334 1.9e-31 142.5 153 47.7
GSVIVG01035975001 Vitis vinifera HOM05D006008 ORTHO05D007334 1.9e-31 142.5 164 49.4
MSTRG.11782 Avicennia marina HOM05D006008 ORTHO05D007334 2.5e-31 142.1 176 42.0
CANSAT21G0760 Cannabis sativa HOM05D006008 ORTHO05D007334 2.5e-31 142.1 139 54.0
CSS0011965 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 4.3e-31 141.4 119 58.8
CSS0025914 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 4.3e-31 141.4 149 49.7
CSS0032373 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 4.3e-31 141.4 119 58.8
ECA234G3283 Erigeron canadensis HOM05D006008 ORTHO05D007334 5.6e-31 141.0 143 49.0
CANSAT80G0905 Cannabis sativa HOM05D006008 ORTHO05D007334 7.3e-31 140.6 184 45.7
Lalb_Chr23g0268191 Lupinus albus HOM05D006008 ORTHO05D007334 7.3e-31 140.6 154 45.5
MBI15_g18236_MAGBIO Magnolia biondii HOM05D006008 ORTHO05D007334 7.3e-31 140.6 165 47.3
Eucgr.C01897 Eucalyptus grandis HOM05D006008 ORTHO05D007334 9.6e-31 140.2 161 46.0
Peaxi162Scf01286g00125 Petunia axillaris HOM05D006008 ORTHO05D007334 9.6e-31 140.2 130 54.6
PGR142G1849 Punica granatum HOM05D006008 ORTHO05D007334 2.1e-30 139.0 216 42.6
CANSAT21G2303 Cannabis sativa HOM05D006008 ORTHO05D007334 3.6e-30 138.3 172 48.8
HanXRQChr09g0270581 Helianthus annuus HOM05D006008 ORTHO05D007334 3.6e-30 138.3 154 46.1
FAN20G1003 Fragaria x ananassa HOM05D006008 ORTHO05D007334 4.8e-30 137.9 156 47.4
EL10Ac4g08536 Beta vulgaris HOM05D006008 ORTHO05D007334 6.2e-30 137.5 154 46.8
PGSC0003DMG400027232 Solanum tuberosum HOM05D006008 ORTHO05D007334 8.1e-30 137.1 144 49.3
CANSAT80G2648 Cannabis sativa HOM05D006008 ORTHO05D007334 1.1e-29 136.7 130 54.6
Sopen04g007490 Solanum pennellii HOM05D006008 ORTHO05D007334 3.1e-29 135.2 141 49.6
CAN.G676.42 Capsicum annuum HOM05D006008 ORTHO05D007334 9.0e-29 133.7 142 47.9
Zm00001eb393290 Zea mays HOM05D006008 ORTHO05D007334 1.5e-28 132.9 132 49.2
CSS0002096 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.0e-28 132.5 162 46.3
CANSAT54G0183 Cannabis sativa HOM05D006008 ORTHO05D007334 3.4e-28 131.7 130 53.8
Nitab4.5_0001663g0180 Nicotiana tabacum HOM05D006008 ORTHO05D007334 3.4e-28 131.7 174 42.5
Oeu001622.3 Olea europaea HOM05D006008 ORTHO05D007334 5.8e-28 131.0 180 40.6
CSS0030467 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.9e-26 125.9 100 59.0
ATR0180G020 Amborella trichopoda HOM05D006008 ORTHO05D007334 4.6e-25 121.3 227 36.1
CSS0013958 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 4.6e-25 121.3 94 61.7
Os10g0421800 Oryza sativa ssp. japonica HOM05D006008 ORTHO05D007334 1.3e-24 119.8 178 38.8
CSS0018849 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.8e-24 119.4 165 44.2
CiPaw.08G005700 Carya illinoinensis HOM05D006008 ORTHO05D007334 2.3e-24 119.0 92 63.0
Nn7g37618 Nelumbo nucifera HOM05D006008 ORTHO05D007334 8.7e-24 117.1 141 46.1
CSS0046362 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 3.3e-23 115.2 174 38.5
Nn7g36096 Nelumbo nucifera HOM05D006008 ORTHO05D007334 4.8e-22 111.3 152 40.1
HPP92_017173 Vanilla planifolia HOM05D006008 ORTHO05D007334 1.8e-21 109.4 146 39.7
Ciclev10007356m.g Citrus clementina HOM05D006008 ORTHO05D007334 3.4e-20 105.1 79 62.0
BcaNung01493 Brassica carinata HOM05D006008 ORTHO05D007334 1.3e-19 103.2 124 70.2
CSS0031354 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.2e-19 102.4 133 39.8
AUR62041257 Chenopodium quinoa HOM05D006008 ORTHO05D007334 2.7e-17 95.5 125 44.0
CANSAT21G2219 Cannabis sativa HOM05D006008 ORTHO05D007334 4.6e-17 94.7 110 50.0
SEGI_02316 Sequoiadendron giganteum HOM05D006008 ORTHO05D007334 7.9e-17 94.0 124 45.2
CSS0039067 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 4.3e-15 88.2 105 46.7
COL.COLO4_04875 Corchorus olitorius HOM05D001779 ORTHO05D001753 5.5e-10 71.2 93 35.5
SEGI_33426 Sequoiadendron giganteum HOM05D006749 ORTHO05D008352 2.3e-08 65.9 125 34.4
SEGI_33441 Sequoiadendron giganteum HOM05D006749 ORTHO05D008352 2.3e-08 65.9 125 34.4
Oeu006556.1 Olea europaea HOM05D001779 ORTHO05D001753 1.1e-07 63.5 93 33.3
MD02G1305700 Malus domestica HOM05D001779 ORTHO05D001753 1.5e-07 63.2 93 35.5
vmacro18948 Vaccinium macrocarpon HOM05D000001 ORTHO05D009667 1.5e-07 63.2 196 25.5
MD02G1306000 Malus domestica HOM05D001779 ORTHO05D001753 2.5e-07 62.4 93 35.5
RcHm_v2.0_Chr1g0317271 Rosa chinensis HOM05D001779 ORTHO05D001753 2.5e-07 62.4 68 42.6
SEGI_32921 Sequoiadendron giganteum HOM05D006749 ORTHO05D008352 2.5e-07 62.4 109 35.8
Rhsim08G0217800 Rhododendron simsii HOM05D000001 ORTHO05D009667 7.4e-07 60.8 196 24.5
Eucgr.K03209 Eucalyptus grandis HOM05D000855 ORTHO05D008530 1.3e-06 60.1 182 23.6
Prupe.2G019900 Prunus persica HOM05D001779 ORTHO05D001753 1.3e-06 60.1 68 42.6
CSS0004396 Camellia sinensis var. sinensis HOM05D001779 ORTHO05D001753 1.6e-06 59.7 68 38.2
CSS0039833 Camellia sinensis var. sinensis HOM05D001779 ORTHO05D001753 1.6e-06 59.7 68 38.2
PSO339G3775 Papaver somniferum HOM05D000855 ORTHO05D008530 1.6e-06 59.7 182 24.2
Solyc12g006575.1 Solanum lycopersicum HOM05D000001 ORTHO05D000003 1.6e-06 59.7 192 27.1
Haze_03158 Corylus avellana HOM05D001779 ORTHO05D001753 2.8e-06 58.9 68 42.6
FvH4_7g01420 Fragaria vesca HOM05D001779 ORTHO05D001753 2.8e-06 58.9 68 39.7
FAN01G1074 Fragaria x ananassa HOM05D001779 ORTHO05D001753 2.8e-06 58.9 68 39.7
FAN06G3831 Fragaria x ananassa HOM05D001779 ORTHO05D001753 2.8e-06 58.9 68 39.7
GSVIVG01032162001 Vitis vinifera HOM05D001779 ORTHO05D001753 2.8e-06 58.9 68 41.2
A02p00600 Brassica napus HOM05D007251 ORTHO05D009266 3.7e-06 58.5 185 26.5
CSS0002295 Camellia sinensis var. sinensis HOM05D001779 ORTHO05D001753 4.8e-06 58.2 68 38.2
Dinv31157 Davidia involucrata HOM05D007063 ORTHO05D008822 4.8e-06 58.2 134 27.6
SEGI_28689 Sequoiadendron giganteum HOM05D006749 ORTHO05D008352 4.8e-06 58.2 66 39.4
CSS0038176 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D009667 8.2e-06 57.4 196 25.0
CSS0041312 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D009667 8.2e-06 57.4 196 25.0
FAN11G1276 Fragaria x ananassa HOM05D000162 ORTHO05D000090 8.2e-06 57.4 161 24.2


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