Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 5.8e-195 684.1 359 100.0
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 7.6e-155 550.8 302 98.0
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 8.5e-146 520.8 302 94.0
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 5.5e-145 518.1 302 93.7
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 9.7e-142 507.3 301 91.4
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 5.3e-132 474.9 314 84.4
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 8.2e-125 451.1 308 83.1
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 6.5e-122 441.4 299 83.6
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 1.5e-118 430.3 304 79.3
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 4.4e-118 428.7 313 78.6
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 1.3e-117 427.2 313 78.6
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 1.3e-106 390.6 304 74.3
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 2.4e-84 316.6 341 56.9
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 1.5e-78 297.4 281 59.4
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 1.3e-77 294.3 281 59.1
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 6.4e-77 292.0 281 58.7
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 1.9e-73 280.4 268 60.4
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 2.5e-73 280.0 291 55.0
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 4.7e-72 275.8 279 58.4
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 4.4e-70 269.2 259 58.3
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 5.8e-70 268.9 268 56.7
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 3.8e-69 266.2 243 60.5
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 2.4e-68 263.5 288 54.9
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 4.6e-67 259.2 256 59.8
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 1.7e-66 257.3 269 56.9
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 2.3e-66 256.9 277 53.4
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 6.6e-66 255.4 261 55.6
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 1.1e-65 254.6 274 54.7
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 1.5e-65 254.2 261 55.6
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 2.5e-65 253.4 293 49.1
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 1.6e-64 250.8 257 56.8
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 3.6e-64 249.6 291 51.9
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 4.8e-64 249.2 242 60.3
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 6.9e-63 245.4 256 54.7
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 6.9e-63 245.4 292 49.0
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 2.6e-62 243.4 249 55.4
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 5.8e-62 242.3 257 54.1
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 7.6e-62 241.9 266 54.9
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 2.2e-61 240.4 332 46.4
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 3.8e-61 239.6 266 52.6
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 1.1e-60 238.0 276 49.3
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 1.9e-60 237.3 251 54.6
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 2.4e-60 236.9 261 52.1
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 7.1e-60 235.3 283 49.1
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 9.3e-60 235.0 265 52.5
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 1.2e-59 234.6 268 51.1
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 4.6e-59 232.6 268 50.0
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 6.6e-58 228.8 265 52.1
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 8.7e-58 228.4 274 50.7
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 1.9e-57 227.3 257 51.4
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 2.5e-57 226.9 267 49.4
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 4.3e-57 226.1 256 50.4
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 2.8e-56 223.4 255 52.2
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 1.4e-55 221.1 275 49.1
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 1.8e-55 220.7 274 46.7
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 3.4e-54 216.5 249 49.4
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 5.8e-54 215.7 245 53.5
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 9.9e-54 214.9 258 51.9
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 4.9e-53 212.6 228 56.1
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 6.4e-53 212.2 258 49.6
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 6.4e-53 212.2 304 44.4
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 1.1e-52 211.5 224 55.4
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 7.1e-52 208.8 244 50.0
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 2.1e-51 207.2 208 59.1
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 2.1e-51 207.2 222 52.7
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 6.0e-51 205.7 248 50.8
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 2.3e-50 203.8 254 48.4
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 3.0e-50 203.4 254 48.4
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 2.5e-49 200.3 227 51.5
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 6.2e-48 195.7 200 55.0
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 1.1e-47 194.9 217 54.4
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 4.2e-44 183.0 193 55.4
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 5.5e-44 182.6 201 53.2
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.7e-43 180.3 204 52.5
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 1.0e-42 178.3 270 39.6
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 8.7e-42 175.3 204 51.5
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 1.5e-41 174.5 274 39.8
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 1.9e-41 174.1 260 40.0
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 5.3e-39 166.0 278 39.6
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 2.0e-38 164.1 210 47.1
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 2.6e-38 163.7 328 36.3
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 3.4e-38 163.3 153 60.8
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 1.0e-37 161.8 191 51.3
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 6.5e-37 159.1 253 43.1
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 1.6e-32 144.4 145 54.5
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 1.0e-29 135.2 122 61.5
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 1.4e-28 131.3 254 39.8
Haze_21613 Corylus avellana HOM05D007522 ORTHO05D009518 1.4e-28 131.3 242 39.3
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 3.0e-26 123.6 265 33.2
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 3.9e-26 123.2 100 67.0
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 2.5e-20 104.0 136 40.4
Glyma.04G070700 Glycine max HOM05D007522 ORTHO05D009518 2.2e-16 90.9 130 44.6
MD08G1138600 Malus domestica HOM05D007522 ORTHO05D009518 1.0e-13 82.0 125 45.6
SEGI_07807 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 2.9e-13 80.5 77 50.6
Cfa021321 Carpinus fangiana HOM05D007522 ORTHO05D009518 3.1e-07 60.5 88 43.2
Glyma.04G070800 Glycine max HOM05D007522 ORTHO05D009518 5.3e-07 59.7 51 52.9
CSS0039372 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 3.5e-06 57.0 42 66.7


User provided reference genes

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