Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p05420 Brassica napus HOM05D008625 ORTHO05D010623 8.7e-105 383.6 194 100.0
BraA01t00516Z Brassica rapa HOM05D008625 ORTHO05D010623 8.7e-105 383.6 194 100.0
BolC1t00594H Brassica oleracea HOM05D008625 ORTHO05D010623 3.1e-102 375.2 194 97.9
BcaC09g52083 Brassica carinata HOM05D008625 ORTHO05D010623 6.5e-100 367.5 194 97.4
C01p06020 Brassica napus HOM05D008625 ORTHO05D010623 6.5e-100 367.5 194 97.4
BcaC09g52084 Brassica carinata HOM05D008625 ORTHO05D010623 1.5e-96 356.3 194 93.8
A03p61610 Brassica napus HOM05D008625 ORTHO05D010623 7.7e-85 317.4 197 83.8
C07p59370 Brassica napus HOM05D008625 ORTHO05D010623 1.7e-84 316.2 197 83.8
BolC7t46381H Brassica oleracea HOM05D008625 ORTHO05D010623 1.7e-84 316.2 197 83.8
BraA03t15203Z Brassica rapa HOM05D008625 ORTHO05D010623 3.8e-84 315.1 197 83.2
Sp7g30630 Schrenkiella parvula HOM05D008625 ORTHO05D010623 5.5e-83 311.2 198 84.3
BcaNung06387 Brassica carinata HOM05D008625 ORTHO05D010623 2.1e-82 309.3 192 84.4
A08p17870 Brassica napus HOM05D008625 ORTHO05D010623 2.1e-82 309.3 196 84.2
BraA08t33739Z Brassica rapa HOM05D008625 ORTHO05D010623 2.1e-82 309.3 196 84.2
CARHR240860 Cardamine hirsuta HOM05D008625 ORTHO05D010623 7.9e-82 307.4 198 82.3
C03p86970 Brassica napus HOM05D008625 ORTHO05D010623 3.0e-81 305.4 191 84.3
C03p86990 Brassica napus HOM05D008625 ORTHO05D010623 3.0e-81 305.4 191 84.3
BolC3t20994H Brassica oleracea HOM05D008625 ORTHO05D010623 3.9e-81 305.1 196 83.2
Thhalv10026293m.g Eutrema salsugineum HOM05D008625 ORTHO05D010623 1.1e-80 303.5 198 81.3
AT4G32860 Arabidopsis thaliana HOM05D008625 ORTHO05D010623 2.8e-79 298.9 200 79.5
AL7G18860 Arabidopsis lyrata HOM05D008625 ORTHO05D010623 7.0e-78 294.3 194 79.4
Carub.0007s0763 Capsella rubella HOM05D008625 ORTHO05D010623 2.5e-75 285.8 201 77.1
Aa31sc706G10 Aethionema arabicum HOM05D008625 ORTHO05D010623 2.1e-74 282.7 202 72.8
BcaB03g12766 Brassica carinata HOM05D008625 ORTHO05D010623 4.8e-71 271.6 195 74.4
THA.LOC104803750 Tarenaya hassleriana HOM05D008625 ORTHO05D010623 3.0e-49 199.1 187 62.0
THA.LOC104804518 Tarenaya hassleriana HOM05D008625 ORTHO05D010623 2.3e-25 119.8 129 56.6
Cpa.g.sc7.202 Carica papaya HOM05D008625 ORTHO05D010623 3.1e-17 92.8 182 37.4
Medtr3g109900 Medicago truncatula HOM05D008625 ORTHO05D010623 2.2e-15 86.7 183 35.5
Medtr3g109920 Medicago truncatula HOM05D008625 ORTHO05D010623 2.9e-15 86.3 183 35.0
TPR.G15108 Trifolium pratense HOM05D008625 ORTHO05D010623 1.4e-14 84.0 176 37.5
VMungo1309G2682 Vigna mungo HOM05D008625 ORTHO05D010623 1.4e-14 84.0 145 40.0
Psat5g020400 Pisum sativum HOM05D008625 ORTHO05D010623 1.9e-14 83.6 179 35.2
Glyma.04G085800 Glycine max HOM05D008625 ORTHO05D010623 4.2e-14 82.4 186 32.3
Glyma.06G087400 Glycine max HOM05D008625 ORTHO05D010623 5.4e-14 82.0 189 34.9
arahy.Tifrunner.gnm1.ann1.66V3J9 Arachis hypogaea HOM05D008625 ORTHO05D010623 7.1e-14 81.6 203 34.0
Psat5g020440 Pisum sativum HOM05D008625 ORTHO05D010623 7.1e-14 81.6 185 34.6
Thecc.09G047000 Theobroma cacao HOM05D001131 ORTHO05D010623 1.6e-13 80.5 201 33.8
Ca_15580_v3 Cicer arietinum L. HOM05D008625 ORTHO05D010623 3.5e-13 79.3 145 40.7
Phvul.009G111200 Phaseolus vulgaris HOM05D008625 ORTHO05D010623 7.8e-13 78.2 147 38.8
MD15G1091300 Malus domestica HOM05D001131 ORTHO05D010623 3.9e-12 75.9 207 32.9
GSVIVG01035287001 Vitis vinifera HOM05D001131 ORTHO05D000972 3.9e-12 75.9 219 31.5
MD08G1111800 Malus domestica HOM05D008625 ORTHO05D010623 5.1e-12 75.5 205 32.2
CANSAT25G2493 Cannabis sativa HOM05D008625 ORTHO05D010623 1.1e-11 74.3 218 33.0
COL.COLO4_20990 Corchorus olitorius HOM05D001131 ORTHO05D010623 1.1e-11 74.3 209 35.4
Gohir.A06G092000 Gossypium hirsutum HOM05D001131 ORTHO05D010623 1.9e-11 73.6 205 34.1
Gohir.D06G091500 Gossypium hirsutum HOM05D001131 ORTHO05D010623 3.3e-11 72.8 202 33.2
Gorai.010G105500 Gossypium raimondii HOM05D001131 ORTHO05D010623 4.3e-11 72.4 202 33.2
Ciclev10009617m.g Citrus clementina HOM05D001131 ORTHO05D000972 7.3e-11 71.6 207 30.0
Lj1g0026047 Lotus japonicus HOM05D008625 ORTHO05D010623 9.6e-11 71.2 181 33.1
Potri.006G236700 Populus trichocarpa HOM05D001131 ORTHO05D000972 9.6e-11 71.2 225 29.8
Sabra06G0185000 Salix brachista HOM05D001131 ORTHO05D000972 9.6e-11 71.2 225 29.8
Prupe.1G446200 Prunus persica HOM05D001131 ORTHO05D010623 1.3e-10 70.9 207 33.3
TWI63G1453 Tripterygium wilfordii HOM05D001131 ORTHO05D000972 4.8e-10 68.9 211 29.9
Manes.16G074200 Manihot esculenta HOM05D001131 ORTHO05D000972 6.2e-10 68.6 230 27.4
Potri.018G046500 Populus trichocarpa HOM05D001131 ORTHO05D000972 1.8e-09 67.0 221 28.1
Atru.chr7.2063 Acer truncatum HOM05D001131 ORTHO05D000972 2.4e-09 66.6 204 32.4
Lalb_Chr08g0242961 Lupinus albus HOM05D008625 ORTHO05D010623 5.3e-09 65.5 188 31.4
Nn8g39098 Nelumbo nucifera HOM05D001131 ORTHO05D000972 1.5e-08 63.9 211 28.0
Sabra18G0045000 Salix brachista HOM05D001131 ORTHO05D000972 1.5e-08 63.9 191 29.8
FAN20G1640 Fragaria x ananassa HOM05D008625 ORTHO05D010623 2.0e-08 63.5 171 31.0
CSS0013249 Camellia sinensis var. sinensis HOM05D001131 ORTHO05D000972 2.6e-08 63.2 196 29.6
FAN15G2009 Fragaria x ananassa HOM05D008625 ORTHO05D010623 3.4e-08 62.8 172 30.2
TAR624G0151 Trochodendron aralioides HOM05D001131 ORTHO05D000972 3.4e-08 62.8 204 28.9
RcHm_v2.0_Chr6g0306461 Rosa chinensis HOM05D008625 ORTHO05D010623 4.5e-08 62.4 174 30.5
Manes.03G059800 Manihot esculenta HOM05D001131 ORTHO05D000972 1.3e-07 60.8 231 27.3
SalBow5G1205 Salvia bowleyana HOM05D001131 ORTHO05D000972 4.9e-07 58.9 183 28.4
DCAR_032098 Daucus carota HOM05D001131 ORTHO05D000972 8.4e-07 58.2 191 28.8
Hma1.2p1_0945F.1_g240300 Hydrangea macrophylla HOM05D001131 ORTHO05D000972 1.4e-06 57.4 203 27.6
FvH4_2g35430 Fragaria vesca HOM05D008625 ORTHO05D010623 1.9e-06 57.0 174 29.9
Aqoxy7G01451 Aquilegia oxysepala HOM05D001131 ORTHO05D000972 3.2e-06 56.2 212 29.2
Medtr8g102660 Medicago truncatula HOM05D001131 ORTHO05D000972 5.4e-06 55.5 201 30.8
FAN27G2073 Fragaria x ananassa HOM05D008625 ORTHO05D010623 7.1e-06 55.1 174 29.3
Oeu017829.1 Olea europaea HOM05D001131 ORTHO05D000972 7.1e-06 55.1 198 31.3
Rhsim05G0041000 Rhododendron simsii HOM05D001131 ORTHO05D000972 7.1e-06 55.1 207 27.5


User provided reference genes

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