Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p05350 Brassica napus HOM05D004267 ORTHO05D005267 2.8e-99 365.2 168 100.0
BolC1t00557H Brassica oleracea HOM05D004267 ORTHO05D005267 8.1e-99 363.6 168 99.4
BraA01t00509Z Brassica rapa HOM05D004267 ORTHO05D005267 8.1e-99 363.6 168 99.4
C01p05770 Brassica napus HOM05D004267 ORTHO05D005267 5.2e-98 360.9 168 98.8
A03p61690 Brassica napus HOM05D004267 ORTHO05D005267 4.4e-97 357.8 168 97.6
C07p59420 Brassica napus HOM05D004267 ORTHO05D005267 4.4e-97 357.8 168 97.6
BcaC09g52093 Brassica carinata HOM05D004267 ORTHO05D005267 5.8e-97 357.5 168 97.6
Sp7g30710 Schrenkiella parvula HOM05D004267 ORTHO05D005267 1.9e-95 352.4 168 95.8
AT4G32930 Arabidopsis thaliana HOM05D004267 ORTHO05D005267 9.3e-95 350.1 168 95.2
BraA03t15208Z Brassica rapa HOM05D004267 ORTHO05D005267 1.2e-94 349.7 178 92.1
Carub.0007s0755 Capsella rubella HOM05D004267 ORTHO05D005267 1.2e-94 349.7 168 94.6
Thhalv10025837m.g Eutrema salsugineum HOM05D004267 ORTHO05D005267 1.2e-94 349.7 168 95.2
AL7G18760 Arabidopsis lyrata HOM05D004267 ORTHO05D005267 6.0e-94 347.4 168 94.6
Aa31sc248G70 Aethionema arabicum HOM05D004267 ORTHO05D005267 3.4e-89 331.6 168 89.9
Aa31LG2G6480 Aethionema arabicum HOM05D004267 ORTHO05D005267 2.9e-88 328.6 168 90.5
CARHR240940 Cardamine hirsuta HOM05D004267 ORTHO05D005267 1.1e-74 283.5 136 94.1
BcaNung02146 Brassica carinata HOM05D004267 ORTHO05D005267 3.4e-73 278.5 126 98.4
THA.LOC104803799 Tarenaya hassleriana HOM05D004267 ORTHO05D005267 1.9e-71 272.7 168 75.6
Glyma.14G092300 Glycine max HOM05D004267 ORTHO05D005267 1.6e-70 269.6 168 72.0
Phvul.001G033101 Phaseolus vulgaris HOM05D004267 ORTHO05D005267 3.5e-70 268.5 168 71.4
Eucgr.C00632 Eucalyptus grandis HOM05D004267 ORTHO05D005267 6.0e-70 267.7 168 72.0
QL02p001694 Quercus lobata HOM05D004267 ORTHO05D005267 1.8e-69 266.2 167 70.7
VMungo0647G2384 Vigna mungo HOM05D004267 ORTHO05D005267 1.8e-69 266.2 168 70.8
Glyma.17G231200 Glycine max HOM05D004267 ORTHO05D005267 2.3e-69 265.8 168 71.4
Manes.03G046100 Manihot esculenta HOM05D004267 ORTHO05D005267 2.3e-69 265.8 168 70.8
Psat6g019000 Pisum sativum HOM05D004267 ORTHO05D005267 5.1e-69 264.6 168 70.2
Ca_13187_v3 Cicer arietinum L. HOM05D004267 ORTHO05D005267 8.7e-69 263.8 168 70.2
MSTRG.1674 Avicennia marina HOM05D004267 ORTHO05D005267 1.1e-68 263.5 168 71.4
Lj5g0002830 Lotus japonicus HOM05D004267 ORTHO05D005267 1.5e-68 263.1 168 69.0
Medtr1g016900 Medicago truncatula HOM05D004267 ORTHO05D005267 4.3e-68 261.5 168 70.8
Duzib187G0506 Durio zibethinus HOM05D004267 ORTHO05D005267 5.7e-68 261.2 168 71.4
CiPaw.15G042300 Carya illinoinensis HOM05D004267 ORTHO05D005267 7.4e-68 260.8 168 69.6
TAR636G0904 Trochodendron aralioides HOM05D004267 ORTHO05D005267 7.4e-68 260.8 168 70.2
ClCG08G016900 Citrullus lanatus HOM05D004267 ORTHO05D005267 9.6e-68 260.4 168 70.2
TPR.G12986 Trifolium pratense HOM05D004267 ORTHO05D005267 9.6e-68 260.4 168 70.8
SGA_v2.0_scaffold88G27217 Striga asiatica HOM05D004267 ORTHO05D005267 1.3e-67 260.0 168 70.2
GSVIVG01035339001 Vitis vinifera HOM05D004267 ORTHO05D005267 1.3e-67 260.0 168 70.8
CSS0026627 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D005267 1.6e-67 259.6 168 70.2
CSS0030161 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D000002 1.6e-67 259.6 168 70.2
Gohir.A06G090500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 2.8e-67 258.8 168 70.8
Gohir.D06G089500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 2.8e-67 258.8 168 70.8
Gorai.010G103400 Gossypium raimondii HOM05D004267 ORTHO05D005267 2.8e-67 258.8 168 70.8
Thecc.09G050400 Theobroma cacao HOM05D004267 ORTHO05D005267 2.8e-67 258.8 168 68.5
Haze_18224 Corylus avellana HOM05D004267 ORTHO05D005267 3.7e-67 258.5 168 68.5
Actinidia14699 Actinidia chinensis HOM05D004267 ORTHO05D005267 4.8e-67 258.1 165 70.3
Cfa017926 Carpinus fangiana HOM05D004267 ORTHO05D005267 6.3e-67 257.7 168 68.5
Sed0007787 Sechium edule HOM05D004267 ORTHO05D005267 1.4e-66 256.5 168 68.5
Actinidia18200 Actinidia chinensis HOM05D004267 ORTHO05D005267 2.4e-66 255.8 165 69.7
PGR031G1882 Punica granatum HOM05D004267 ORTHO05D005267 3.1e-66 255.4 168 69.0
Oeu036354.1 Olea europaea HOM05D004267 ORTHO05D005267 4.1e-66 255.0 168 70.2
Rhsim07G0144100 Rhododendron simsii HOM05D004267 ORTHO05D005267 6.9e-66 254.2 168 69.0
CsaV3_2G025720 Cucumis sativus L. HOM05D004267 ORTHO05D005267 2.0e-65 252.7 168 67.9
Duzib168G1102 Durio zibethinus HOM05D004267 ORTHO05D005267 2.0e-65 252.7 168 67.3
CANSAT01G0851 Cannabis sativa HOM05D004267 ORTHO05D005267 5.9e-65 251.1 168 68.5
CANSAT01G1320 Cannabis sativa HOM05D004267 ORTHO05D005267 5.9e-65 251.1 168 68.5
Lalb_Chr14g0367901 Lupinus albus HOM05D004267 ORTHO05D005267 5.9e-65 251.1 168 67.3
Potri.006G233500 Populus trichocarpa HOM05D004267 ORTHO05D005267 5.9e-65 251.1 168 67.9
vmacro05276 Vaccinium macrocarpon HOM05D004267 ORTHO05D005267 1.0e-64 250.4 175 67.4
Hma1.2p1_1213F.1_g267510 Hydrangea macrophylla HOM05D004267 ORTHO05D005267 2.2e-64 249.2 168 68.5
Peaxi162Scf00247g00612 Petunia axillaris HOM05D004267 ORTHO05D005267 2.2e-64 249.2 168 68.5
RcHm_v2.0_Chr6g0310421 Rosa chinensis HOM05D004267 ORTHO05D005267 5.0e-64 248.1 167 67.1
Ciclev10009729m.g Citrus clementina HOM05D004267 ORTHO05D005267 6.5e-64 247.7 167 67.1
TWI34G0953 Tripterygium wilfordii HOM05D004267 ORTHO05D005267 1.4e-63 246.5 168 66.7
Lsat_1_v5_gn_3_28241 Lactuca sativa HOM05D004267 ORTHO05D005267 1.9e-63 246.1 165 69.1
SalBow4G2144 Salvia bowleyana HOM05D004267 ORTHO05D005267 1.9e-63 246.1 168 66.1
Nn8g38967 Nelumbo nucifera HOM05D004267 ORTHO05D005267 2.5e-63 245.7 168 67.3
Migut.A00159 Erythranthe guttata HOM05D004267 ORTHO05D005267 3.2e-63 245.4 168 67.3
Prupe.1G415500 Prunus persica HOM05D004267 ORTHO05D005267 3.2e-63 245.4 165 64.8
Nitab4.5_0021628g0010 Nicotiana tabacum HOM05D004267 ORTHO05D005267 4.2e-63 245.0 168 67.3
arahy.Tifrunner.gnm1.ann1.35PLQF Arachis hypogaea HOM05D004267 ORTHO05D005267 1.6e-62 243.0 167 64.7
HanXRQChr17g0539351 Helianthus annuus HOM05D004267 ORTHO05D005267 2.7e-62 242.3 165 67.9
Atru.chr7.2026 Acer truncatum HOM05D004267 ORTHO05D005267 3.5e-62 241.9 168 63.7
Gorai.009G047300 Gossypium raimondii HOM05D004267 ORTHO05D005267 3.5e-62 241.9 168 64.9
Lj8A557T6 Lonicera japonica HOM05D004267 ORTHO05D005267 3.5e-62 241.9 168 67.3
ATR0789G016 Amborella trichopoda HOM05D004267 ORTHO05D005267 4.6e-62 241.5 168 64.9
FAN24G1314 Fragaria x ananassa HOM05D004267 ORTHO05D005267 4.6e-62 241.5 167 63.5
Gohir.A05G044300 Gossypium hirsutum HOM05D004267 ORTHO05D005267 4.6e-62 241.5 168 64.3
FAN20G1958 Fragaria x ananassa HOM05D004267 ORTHO05D005267 7.9e-62 240.7 167 64.1
FvH4_2g32280 Fragaria vesca HOM05D004267 ORTHO05D005267 1.0e-61 240.4 167 63.5
TAR624G0139 Trochodendron aralioides HOM05D004267 ORTHO05D005267 2.3e-61 239.2 168 64.9
Sc06g0000890 Simmondsia chinensis HOM05D004267 ORTHO05D005267 3.9e-61 238.4 168 64.3
PSO210G6502 Papaver somniferum HOM05D004267 ORTHO05D005267 6.7e-61 237.7 168 63.7
CAN.G309.57 Capsicum annuum HOM05D004267 ORTHO05D005267 1.1e-60 236.9 168 66.7
Solyc11g070050.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 1.1e-60 236.9 168 64.9
Sopen11g028730 Solanum pennellii HOM05D004267 ORTHO05D005267 1.1e-60 236.9 168 64.9
Cc08_g10140 Coffea canephora HOM05D004267 ORTHO05D005267 2.5e-60 235.7 168 66.1
PSO210G4696 Papaver somniferum HOM05D004267 ORTHO05D005267 2.5e-60 235.7 168 63.1
DCAR_000778 Daucus carota HOM05D004267 ORTHO05D005267 4.3e-60 235.0 168 67.3
PGSC0003DMG400025516 Solanum tuberosum HOM05D004267 ORTHO05D005267 1.3e-59 233.4 168 63.7
unitig_578.g16576 Utricularia gibba HOM05D004267 ORTHO05D005267 1.3e-59 233.4 165 64.8
Dinv27959 Davidia involucrata HOM05D004267 ORTHO05D005267 2.8e-59 232.3 168 63.7
ECA246G5265 Erigeron canadensis HOM05D004267 ORTHO05D005267 6.3e-59 231.1 165 66.1
COL.COLO4_21022 Corchorus olitorius HOM05D004267 ORTHO05D005267 1.1e-58 230.3 190 58.9
Sabra06G0181900 Salix brachista HOM05D004267 ORTHO05D005267 1.1e-58 230.3 220 51.4
FAN15G3631 Fragaria x ananassa HOM05D004267 ORTHO05D005267 1.8e-58 229.6 180 58.9
Sc09g0009630 Simmondsia chinensis HOM05D004267 ORTHO05D005267 2.4e-58 229.2 168 61.3
Aqoxy7G03943 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 3.1e-58 228.8 160 63.1
MBI04_g12184_MAGBIO Magnolia biondii HOM05D004267 ORTHO05D005267 2.0e-57 226.1 190 58.4
Solyc11g070060.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 1.3e-56 223.4 168 62.5
SEGI_14756 Sequoiadendron giganteum HOM05D004267 ORTHO05D005267 2.9e-56 222.2 168 61.9
Os01g0565600 Oryza sativa ssp. japonica HOM05D004267 ORTHO05D005267 5.5e-55 218.0 167 60.5
EL10Ac2g03945 Beta vulgaris HOM05D004267 ORTHO05D005267 1.2e-54 216.9 168 58.3
Zm00001eb356880 Zea mays HOM05D004267 ORTHO05D005267 2.7e-54 215.7 165 61.2
arahy.Tifrunner.gnm1.ann1.97AHJW Arachis hypogaea HOM05D004267 ORTHO05D005267 3.6e-54 215.3 204 52.0
Hund03363 Selenicereus undatus HOM05D004267 ORTHO05D005267 4.6e-54 214.9 190 54.2
HPP92_004580 Vanilla planifolia HOM05D004267 ORTHO05D005267 7.4e-52 207.6 167 58.7
Nitab4.5_0000664g0030 Nicotiana tabacum HOM05D006502 ORTHO05D005267 1.1e-50 203.8 131 67.2
Aqoxy408s001 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 1.2e-49 200.3 126 69.0
MELO3C010766.2 Cucumis melo HOM05D004267 ORTHO05D005267 1.2e-49 200.3 138 65.9
FAN27G1738 Fragaria x ananassa HOM05D004267 ORTHO05D005267 2.6e-49 199.1 176 52.8
RcHm_v2.0_Chr6g0310431 Rosa chinensis HOM05D004267 ORTHO05D005267 6.5e-48 194.5 167 56.3
BcaC07g42315 Brassica carinata HOM05D004267 ORTHO05D005267 3.2e-47 192.2 183 57.4
Hund19479 Selenicereus undatus HOM05D004267 ORTHO05D005267 6.1e-46 188.0 179 49.2
Mapoly0044s0101 Marchantia polymorpha HOM05D004267 ORTHO05D005267 1.4e-45 186.8 168 52.4
Pp3c5_10040 Physcomitrium patens HOM05D004267 ORTHO05D005267 1.5e-44 183.3 168 52.4
Nn6g35383 Nelumbo nucifera HOM05D004267 ORTHO05D005267 9.7e-44 180.6 127 63.8
FvH4_2g32260 Fragaria vesca HOM05D004267 ORTHO05D005267 1.8e-42 176.4 165 52.7
Gohir.D05G045900 Gossypium hirsutum HOM05D004267 ORTHO05D005267 4.1e-42 175.3 168 51.8
CDE07G0102 Ceratophyllum demersum HOM05D004267 ORTHO05D005267 3.5e-41 172.2 116 65.5
DCAR_004448 Daucus carota HOM05D004267 ORTHO05D005267 2.9e-40 169.1 166 50.0
MD08G1073900 Malus domestica HOM05D004267 ORTHO05D005267 2.1e-38 162.9 179 46.4
Sopen11g028740 Solanum pennellii HOM05D004267 ORTHO05D005267 1.0e-37 160.6 168 48.8
DCAR_004449 Daucus carota HOM05D004267 ORTHO05D005267 1.4e-37 160.2 165 49.7
CBR_g18691 Chara braunii HOM05D004267 ORTHO05D005267 2.3e-37 159.5 165 50.3
SMO117G0066 Selaginella moellendorffii HOM05D004267 ORTHO05D005267 1.1e-36 157.1 169 46.7
Cpa.g.sc78.12 Carica papaya HOM05D004267 ORTHO05D005267 2.6e-36 156.0 99 72.7
AUR62040201 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.6e-36 156.0 135 54.1
AUR62043052 Chenopodium quinoa HOM05D004267 ORTHO05D005267 3.3e-36 155.6 134 54.5
FAN15G2319 Fragaria x ananassa HOM05D004267 ORTHO05D005267 1.3e-35 153.7 151 51.7
FAN24G0417 Fragaria x ananassa HOM05D004267 ORTHO05D005267 1.7e-35 153.3 147 51.7
CDE07G1388 Ceratophyllum demersum HOM05D004267 ORTHO05D005267 6.3e-35 151.4 117 59.8
Lsat_1_v5_gn_5_67680 Lactuca sativa HOM05D004267 ORTHO05D005267 8.2e-35 151.0 131 58.8
AUR62009204 Chenopodium quinoa HOM05D004267 ORTHO05D005267 5.3e-34 148.3 131 53.4
arahy.Tifrunner.gnm1.ann1.BB3MLG Arachis hypogaea HOM05D004267 ORTHO05D005267 1.1e-31 140.6 98 62.2
arahy.Tifrunner.gnm1.ann1.JED36R Arachis hypogaea HOM05D004267 ORTHO05D005267 1.1e-31 140.6 98 62.2
AagrBONN_evm.TU.Sc2ySwM_344.4469 Anthoceros agrestis HOM05D004267 ORTHO05D005267 3.2e-31 139.0 128 50.0
Zm00001eb159830 Zea mays HOM05D004267 ORTHO05D005267 2.2e-27 126.3 98 59.2
GSVIVG01016840001 Vitis vinifera HOM05D004267 ORTHO05D005267 3.8e-24 115.5 165 38.2
GSVIVG01016838001 Vitis vinifera HOM05D004267 ORTHO05D005267 4.2e-23 112.1 165 36.4
Rhsim01G0086000 Rhododendron simsii HOM05D004267 ORTHO05D005267 1.6e-22 110.2 78 61.5
Oeu057699.1 Olea europaea HOM05D004267 ORTHO05D005267 2.1e-22 109.8 111 51.4
Peaxi162Scf00545g00002 Petunia axillaris HOM05D004267 ORTHO05D005267 2.1e-22 109.8 98 59.2
Aqoxy7G03867 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 4.0e-21 105.5 127 40.2
Aqoxy7G03891 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 2.6e-20 102.8 95 52.6
Peaxi162Scf00545g00001 Petunia axillaris HOM05D004267 ORTHO05D005267 2.0e-17 93.2 75 60.0
BcaB05g24144 Brassica carinata HOM05D000010 ORTHO05D000063 3.3e-15 85.9 42 97.6
BcaB04g19156 Brassica carinata HOM05D004267 ORTHO05D096112 2.1e-14 83.2 41 95.1
Cre09.g395800 Chlamydomonas reinhardtii HOM05D004267 ORTHO05D005267 2.8e-14 82.8 170 32.4
AUR62002213 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.0e-12 76.6 65 53.8
AUR62018016 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.0e-12 76.6 65 53.8
Nitab4.5_0001927g0060 Nicotiana tabacum HOM05D004267 ORTHO05D005267 2.0e-12 76.6 117 32.5
AUR62010512 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.6e-12 76.3 60 56.7
AUR62022800 Chenopodium quinoa HOM05D004267 ORTHO05D005267 4.4e-12 75.5 68 51.5
Nitab4.5_0001927g0070 Nicotiana tabacum HOM05D004267 ORTHO05D005267 4.4e-12 75.5 104 37.5
AUR62007889 Chenopodium quinoa HOM05D004267 ORTHO05D005267 4.9e-11 72.0 60 55.0
AUR62034857 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.4e-10 69.7 65 50.8
COL.COLO4_30599 Corchorus olitorius HOM05D004267 ORTHO05D044750 4.1e-10 68.9 134 34.3
AUR62044607 Chenopodium quinoa HOM05D004267 ORTHO05D005267 5.4e-10 68.6 65 49.2
AUR62036408 Chenopodium quinoa HOM05D001707 ORTHO05D001694 4.6e-09 65.5 45 62.2
CAN.G1143.36 Capsicum annuum HOM05D001836 ORTHO05D001519 1.9e-07 60.1 86 36.0


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