Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 1.9e-279 965.3 513 100.0
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 5.8e-273 943.7 513 98.2
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 3.0e-269 931.4 508 91.7
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 3.0e-269 931.4 508 91.7
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 2.4e-250 868.6 480 94.4
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 1.6e-246 855.9 479 89.1
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 3.5e-246 854.7 479 89.1
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 1.0e-245 853.2 480 88.3
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 5.1e-245 850.9 481 89.0
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 9.6e-244 846.7 477 91.2
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 1.3e-243 846.3 478 94.1
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 1.3e-243 846.3 478 95.6
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 2.8e-243 845.1 478 88.7
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 1.7e-240 835.9 478 92.7
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 4.9e-240 834.3 476 88.2
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 1.2e-222 776.5 484 87.8
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 2.3e-221 772.3 478 87.9
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 2.3e-221 772.3 479 80.2
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 1.8e-213 746.1 484 76.2
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 1.8e-213 746.1 476 77.1
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 2.3e-213 745.7 485 76.3
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 3.0e-213 745.3 485 76.5
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 6.7e-213 744.2 396 89.6
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 8.8e-213 743.8 396 88.9
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 8.8e-213 743.8 396 89.1
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 1.1e-212 743.4 396 89.1
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 1.5e-212 743.0 396 88.9
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 2.0e-212 742.7 478 76.4
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 3.3e-212 741.9 394 90.1
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 3.3e-212 741.9 485 76.1
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 4.4e-212 741.5 394 89.1
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 7.4e-212 740.7 396 88.4
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 7.4e-212 740.7 484 76.9
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 9.7e-212 740.3 394 89.1
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 9.7e-212 740.3 395 88.9
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 1.3e-211 740.0 394 89.3
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.7e-211 739.6 394 90.1
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.7e-211 739.6 394 90.1
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 1.7e-211 739.6 394 88.8
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 1.7e-211 739.6 396 89.1
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 2.2e-211 739.2 485 75.9
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 2.2e-211 739.2 396 88.6
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 3.7e-211 738.4 485 76.7
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 3.7e-211 738.4 394 88.8
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 4.8e-211 738.0 396 88.4
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 4.8e-211 738.0 481 76.3
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 4.8e-211 738.0 396 88.9
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 6.3e-211 737.6 396 88.6
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 6.3e-211 737.6 484 76.7
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 8.2e-211 737.3 395 88.6
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 8.2e-211 737.3 485 75.5
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 1.1e-210 736.9 484 76.2
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 1.4e-210 736.5 396 88.4
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 1.8e-210 736.1 484 76.2
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 1.8e-210 736.1 396 87.4
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 1.8e-210 736.1 395 88.6
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 2.4e-210 735.7 396 87.6
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 2.4e-210 735.7 394 88.3
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 3.1e-210 735.3 395 88.4
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 4.1e-210 734.9 396 87.9
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 4.1e-210 734.9 395 87.8
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 4.1e-210 734.9 396 88.4
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 4.1e-210 734.9 481 76.1
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 7.0e-210 734.2 481 75.9
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 7.0e-210 734.2 393 88.0
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 9.1e-210 733.8 396 87.6
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 9.1e-210 733.8 396 87.9
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 9.1e-210 733.8 396 87.6
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 1.2e-209 733.4 394 87.8
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 2.0e-209 732.6 396 87.4
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 2.6e-209 732.3 481 75.7
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 2.6e-209 732.3 396 86.9
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 3.5e-209 731.9 394 88.3
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 3.5e-209 731.9 483 75.4
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 3.5e-209 731.9 396 87.9
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 4.5e-209 731.5 478 74.9
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 4.5e-209 731.5 395 87.8
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 4.5e-209 731.5 481 75.7
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 7.7e-209 730.7 396 86.9
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 1.0e-208 730.3 395 87.6
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 1.3e-208 729.9 394 88.1
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 1.3e-208 729.9 476 74.8
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 1.3e-208 729.9 395 86.3
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 1.7e-208 729.6 393 87.5
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 1.7e-208 729.6 479 74.3
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 2.9e-208 728.8 396 87.1
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 6.5e-208 727.6 395 86.6
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 8.5e-208 727.2 395 86.8
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 1.1e-207 726.9 479 74.9
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 2.5e-207 725.7 483 74.3
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 3.2e-207 725.3 481 74.4
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 4.2e-207 724.9 396 86.1
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 9.4e-207 723.8 396 85.9
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 2.1e-206 722.6 393 85.8
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 4.7e-206 721.5 396 86.4
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 1.4e-205 719.9 395 85.8
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 1.8e-205 719.5 395 86.1
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 1.1e-204 716.8 427 81.5
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 1.4e-197 693.3 393 84.0
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 3.8e-192 675.2 393 78.9
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 1.5e-191 673.3 356 88.5
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 3.2e-191 672.2 398 79.4
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 4.7e-190 668.3 395 81.8
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 1.8e-189 666.4 391 79.3
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 2.0e-188 662.9 389 79.4
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 2.8e-187 659.1 386 79.3
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 1.2e-174 617.1 392 73.5
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.8e-165 586.6 342 82.7
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 1.5e-164 583.6 296 91.9
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 7.5e-164 581.3 391 73.9
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 1.7e-163 580.1 378 69.6
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 2.4e-162 576.2 387 67.4
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 2.8e-150 536.2 289 88.6
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 3.6e-150 535.8 289 88.6
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 5.1e-136 488.8 266 84.6
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 4.3e-135 485.7 254 87.0
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 6.1e-105 385.6 237 78.9
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 6.5e-99 365.5 191 86.9
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 9.8e-79 298.5 171 81.3
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 6.4e-62 242.7 196 63.3
MD08G1063500 Malus domestica HOM05D006192 ORTHO05D008003 9.2e-61 238.8 130 86.9
SalBow8G1594 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.2e-55 221.9 135 80.0
SEGI_03729 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 1.7e-54 218.0 136 75.7
SalBow5G3520 Salvia bowleyana HOM05D000200 ORTHO05D000262 4.4e-47 193.4 140 72.9
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 8.1e-33 146.0 94 76.6
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 2.9e-30 137.5 105 64.8
Atru.chr7.1089 Acer truncatum HOM05D006192 ORTHO05D008003 1.0e-27 129.0 70 84.3
BcaC01g05298 Brassica carinata HOM05D006192 ORTHO05D091607 9.9e-15 85.9 59 71.2
HPP92_013398 Vanilla planifolia HOM05D000776 ORTHO05D001624 2.8e-09 67.8 152 28.9
Mapoly0068s0034 Marchantia polymorpha HOM05D000776 ORTHO05D001624 5.3e-08 63.5 152 30.9
Mapoly0065s0029 Marchantia polymorpha HOM05D000776 ORTHO05D001624 1.5e-07 62.0 149 28.9
Ciclev10020907m.g Citrus clementina HOM05D000776 ORTHO05D001624 2.6e-07 61.2 155 29.7
Nn2g15146 Nelumbo nucifera HOM05D000776 ORTHO05D001624 1.7e-06 58.5 152 28.9
Pp3c14_11550 Physcomitrium patens HOM05D000776 ORTHO05D002281 2.2e-06 58.2 151 30.5
Migut.E01129 Erythranthe guttata HOM05D000776 ORTHO05D001624 2.9e-06 57.8 154 26.0
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 8.4e-06 56.2 162 25.3


User provided reference genes

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