Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p04020 Brassica napus HOM05D006253 ORTHO05D007666 5.6e-87 324.3 173 100.0
BcaNung06978 Brassica carinata HOM05D006253 ORTHO05D007666 8.4e-83 310.5 173 96.5
Sp7g32200 Schrenkiella parvula HOM05D006253 ORTHO05D007666 4.2e-82 308.1 173 95.4
BraA03t15367Z Brassica rapa HOM05D006253 ORTHO05D007666 6.0e-81 304.3 173 94.8
Carub.0007s0590 Capsella rubella HOM05D006253 ORTHO05D007666 1.3e-80 303.1 173 92.5
AT4G34412 Arabidopsis thaliana HOM05D006253 ORTHO05D007666 3.0e-80 302.0 173 93.1
AL7G16840 Arabidopsis lyrata HOM05D006253 ORTHO05D007666 6.6e-80 300.8 173 93.1
C07p60590 Brassica napus HOM05D006253 ORTHO05D007666 8.7e-80 300.4 173 93.1
Thhalv10026394m.g Eutrema salsugineum HOM05D006253 ORTHO05D007666 1.5e-79 299.7 173 92.5
CARHR242350 Cardamine hirsuta HOM05D006253 ORTHO05D007666 6.2e-78 294.3 173 90.8
Aa31LG2G16330 Aethionema arabicum HOM05D006253 ORTHO05D007666 2.1e-73 279.3 173 86.7
THA.LOC104807358 Tarenaya hassleriana HOM05D006253 ORTHO05D007666 9.0e-69 263.8 173 81.5
BolC7t46489H Brassica oleracea HOM05D003825 ORTHO05D004491 1.7e-67 259.6 150 92.7
Ciclev10029390m.g Citrus clementina HOM05D006253 ORTHO05D007666 7.4e-63 244.2 173 74.6
Potri.004G141400 Populus trichocarpa HOM05D006253 ORTHO05D007666 7.4e-63 244.2 173 75.1
COL.COLO4_32658 Corchorus olitorius HOM05D006253 ORTHO05D007666 3.7e-62 241.9 173 75.1
Sabra04G0093200 Salix brachista HOM05D006253 ORTHO05D007666 6.2e-62 241.1 173 74.0
Gohir.A01G006900 Gossypium hirsutum HOM05D006253 ORTHO05D007666 1.1e-61 240.4 173 75.1
Gorai.002G008000 Gossypium raimondii HOM05D006253 ORTHO05D007666 1.8e-61 239.6 173 75.1
Thecc.02G100600 Theobroma cacao HOM05D006253 ORTHO05D007666 2.4e-61 239.2 173 74.6
VMungo1080G0444 Vigna mungo HOM05D006253 ORTHO05D007666 6.9e-61 237.7 173 73.4
Prupe.8G124200 Prunus persica HOM05D006253 ORTHO05D007666 9.0e-61 237.3 175 76.0
Sc14g0002650 Simmondsia chinensis HOM05D006253 ORTHO05D007666 1.2e-60 236.9 173 74.0
arahy.Tifrunner.gnm1.ann1.ETD7FQ Arachis hypogaea HOM05D006253 ORTHO05D007666 1.5e-60 236.5 173 72.3
MD05G1080500 Malus domestica HOM05D006253 ORTHO05D007666 2.0e-60 236.1 174 75.3
PGR142G1116 Punica granatum HOM05D006253 ORTHO05D007666 2.6e-60 235.7 173 72.8
Gohir.D01G007000 Gossypium hirsutum HOM05D006253 ORTHO05D007666 4.5e-60 235.0 173 74.0
RcHm_v2.0_Chr6g0257111 Rosa chinensis HOM05D006253 ORTHO05D007666 4.5e-60 235.0 175 74.3
FvH4_2g06110 Fragaria vesca HOM05D006253 ORTHO05D007666 7.6e-60 234.2 175 74.3
FAN24G2487 Fragaria x ananassa HOM05D006253 ORTHO05D007666 7.6e-60 234.2 175 74.3
Manes.01G064000 Manihot esculenta HOM05D006253 ORTHO05D007666 7.6e-60 234.2 173 74.6
CANSAT25G0326 Cannabis sativa HOM05D006253 ORTHO05D007666 1.0e-59 233.8 173 74.0
Glyma.04G194000 Glycine max HOM05D006253 ORTHO05D007666 1.0e-59 233.8 173 73.4
QL11p035967 Quercus lobata HOM05D006253 ORTHO05D007666 1.0e-59 233.8 172 75.0
Actinidia12952 Actinidia chinensis HOM05D006253 ORTHO05D007666 1.3e-59 233.4 173 72.8
CiPaw.05G006400 Carya illinoinensis HOM05D006253 ORTHO05D007666 1.3e-59 233.4 173 72.8
Eucgr.I01155 Eucalyptus grandis HOM05D006253 ORTHO05D007666 1.3e-59 233.4 173 72.8
arahy.Tifrunner.gnm1.ann1.AJN977 Arachis hypogaea HOM05D006253 ORTHO05D007666 4.9e-59 231.5 173 70.5
FAN27G3246 Fragaria x ananassa HOM05D006253 ORTHO05D007666 4.9e-59 231.5 181 72.4
Nn5g30328 Nelumbo nucifera HOM05D006253 ORTHO05D007666 6.5e-59 231.1 173 73.4
CANSAT35G0887 Cannabis sativa HOM05D006253 ORTHO05D007666 8.4e-59 230.7 173 73.4
TAR376G0695 Trochodendron aralioides HOM05D006253 ORTHO05D007666 8.4e-59 230.7 164 75.6
Phvul.005G182700 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 1.4e-58 229.9 173 71.1
Lj5C209T13 Lonicera japonica HOM05D006253 ORTHO05D007666 2.5e-58 229.2 163 74.2
Lj6g0019810 Lotus japonicus HOM05D006253 ORTHO05D007666 7.1e-58 227.6 164 73.2
Sed0027718 Sechium edule HOM05D006253 ORTHO05D007666 1.6e-57 226.5 173 71.7
Zm00001eb124670 Zea mays HOM05D006253 ORTHO05D007666 2.1e-57 226.1 173 70.5
Rhsim03G0192100 Rhododendron simsii HOM05D006253 ORTHO05D007666 3.5e-57 225.3 173 70.5
GSVIVG01031749001 Vitis vinifera HOM05D006253 ORTHO05D007666 3.5e-57 225.3 173 69.9
Hma1.2p1_0370F.1_g137800 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 4.6e-57 224.9 173 71.7
TPR.G19178 Trifolium pratense HOM05D006253 ORTHO05D007666 4.6e-57 224.9 164 72.0
TWI79G0152 Tripterygium wilfordii HOM05D006253 ORTHO05D007666 1.0e-56 223.8 173 70.5
MELO3C019508.2 Cucumis melo HOM05D006253 ORTHO05D007666 1.3e-56 223.4 173 69.4
Lalb_Chr25g0286231 Lupinus albus HOM05D006253 ORTHO05D007666 5.1e-56 221.5 173 67.6
TPR.G19494 Trifolium pratense HOM05D006253 ORTHO05D007666 5.1e-56 221.5 163 71.8
Os01g0142200 Oryza sativa ssp. japonica HOM05D006253 ORTHO05D007666 6.7e-56 221.1 173 69.9
CAN.G1041.15 Capsicum annuum HOM05D006253 ORTHO05D007666 1.5e-55 219.9 173 69.9
Ca_15796_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 2.5e-55 219.2 163 73.6
Ca_30406_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 2.5e-55 219.2 163 73.6
Sopen01g050480 Solanum pennellii HOM05D006253 ORTHO05D007666 2.5e-55 219.2 173 69.9
arahy.Tifrunner.gnm1.ann1.5N1458 Arachis hypogaea HOM05D006253 ORTHO05D007666 4.3e-55 218.4 194 63.4
Lsat_1_v5_gn_5_112681 Lactuca sativa HOM05D006253 ORTHO05D007666 4.3e-55 218.4 163 71.8
EL10Ac5g11497 Beta vulgaris HOM05D006253 ORTHO05D007666 5.7e-55 218.0 173 69.4
HanXRQChr16g0501301 Helianthus annuus HOM05D006253 ORTHO05D007666 1.3e-54 216.9 173 69.9
CsaV3_3G018580 Cucumis sativus L. HOM05D006253 ORTHO05D007666 2.1e-54 216.1 173 67.6
PGSC0003DMG400025894 Solanum tuberosum HOM05D006253 ORTHO05D007666 3.7e-54 215.3 173 68.8
PSO782G1871 Papaver somniferum HOM05D006253 ORTHO05D007666 4.8e-54 214.9 158 73.4
Rhsim05G0084000 Rhododendron simsii HOM05D006253 ORTHO05D007666 1.1e-53 213.8 182 66.5
arahy.Tifrunner.gnm1.ann1.1E2X9I Arachis hypogaea HOM05D006253 ORTHO05D007666 3.1e-53 212.2 150 73.3
Medtr8g099835 Medicago truncatula HOM05D006253 ORTHO05D007666 5.3e-53 211.5 149 75.8
Oeu010588.1 Olea europaea HOM05D006253 ORTHO05D007666 1.2e-52 210.3 173 67.6
Ca_01013_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 2.6e-52 209.1 162 67.3
SGA_v2.0_scaffold22G09667 Striga asiatica HOM05D006253 ORTHO05D007666 2.6e-52 209.1 173 67.1
MSTRG.27724 Avicennia marina HOM05D006253 ORTHO05D007666 3.4e-52 208.8 173 67.1
Duzib052G0633 Durio zibethinus HOM05D006253 ORTHO05D007666 4.5e-52 208.4 144 76.4
ECA234G4670 Erigeron canadensis HOM05D006253 ORTHO05D007666 4.5e-52 208.4 163 68.1
HPP92_001047 Vanilla planifolia HOM05D006253 ORTHO05D007666 1.3e-51 206.8 173 65.3
BolC1t00422H Brassica oleracea HOM05D006253 ORTHO05D007666 2.2e-51 206.1 116 94.8
PSO478G4849 Papaver somniferum HOM05D006253 ORTHO05D007666 1.2e-49 200.3 141 76.6
Mapoly0083s0082 Marchantia polymorpha HOM05D006253 ORTHO05D007666 2.7e-49 199.1 172 61.6
MBI02_g02992_MAGBIO Magnolia biondii HOM05D006253 ORTHO05D007666 7.9e-49 197.6 144 74.3
Psat5g098280 Pisum sativum HOM05D006253 ORTHO05D007666 1.0e-48 197.2 144 71.5
Solyc01g108260.4 Solanum lycopersicum HOM05D006253 ORTHO05D007666 2.5e-47 192.6 149 69.8
FAN20G2826 Fragaria x ananassa HOM05D006253 ORTHO05D007666 3.3e-47 192.2 173 65.3
Atru.chr5.2705 Acer truncatum HOM05D006253 ORTHO05D007666 4.3e-47 191.8 174 64.9
Glyma.06G172100 Glycine max HOM05D006253 ORTHO05D007666 4.3e-47 191.8 145 70.3
AagrBONN_evm.TU.Sc2ySwM_344.4457 Anthoceros agrestis HOM05D006253 ORTHO05D007666 9.7e-47 190.7 164 58.5
HanXRQChr10g0319791 Helianthus annuus HOM05D006253 ORTHO05D007666 2.2e-46 189.5 150 70.0
Sed0021593 Sechium edule HOM05D006253 ORTHO05D007666 1.1e-45 187.2 173 60.7
Pp3c22_3990 Physcomitrium patens HOM05D006253 ORTHO05D007666 5.3e-45 184.9 164 57.9
CDE08G0295 Ceratophyllum demersum HOM05D006253 ORTHO05D007666 1.3e-43 180.3 144 68.8
CSS0003209 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 1.7e-43 179.9 142 70.4
DCAR_007862 Daucus carota HOM05D006253 ORTHO05D007666 3.8e-43 178.7 144 65.3
C01p04340 Brassica napus HOM05D006253 ORTHO05D007666 8.5e-43 177.6 118 83.1
Hund00335 Selenicereus undatus HOM05D006253 ORTHO05D007666 5.5e-42 174.9 173 60.1
SMO351G0094 Selaginella moellendorffii HOM05D006253 ORTHO05D007666 1.4e-40 170.2 158 58.9
CBR_g38557 Chara braunii HOM05D006253 ORTHO05D007666 3.9e-40 168.7 163 55.8
Phvul.002G266500 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 2.8e-38 162.5 111 74.8
A03p62890 Brassica napus HOM05D000211 ORTHO05D007666 3.7e-38 162.2 175 58.9
FAN15G3440 Fragaria x ananassa HOM05D006253 ORTHO05D007666 4.8e-38 161.8 173 58.4
AUR62029937 Chenopodium quinoa HOM05D006253 ORTHO05D007666 2.2e-35 152.9 120 68.3
AUR62033746 Chenopodium quinoa HOM05D006253 ORTHO05D007666 3.2e-34 149.1 144 61.8
CSS0033941 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 1.1e-31 140.6 146 60.3
SEGI_00233 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 1.1e-31 140.6 121 62.0
Medtr2g105210 Medicago truncatula HOM05D006253 ORTHO05D007666 7.4e-31 137.9 123 60.2
MD10G1094500 Malus domestica HOM05D006253 ORTHO05D007666 2.8e-30 136.0 100 74.0
Cc02_g18770 Coffea canephora HOM05D006253 ORTHO05D007666 1.2e-25 120.6 89 71.9
Prupe.4G258000 Prunus persica HOM05D006253 ORTHO05D007666 2.7e-25 119.4 114 59.6
Prupe.6G016400 Prunus persica HOM05D006253 ORTHO05D007666 8.0e-25 117.9 102 65.7
Cre01.g030950 Chlamydomonas reinhardtii HOM05D006253 ORTHO05D007666 1.0e-24 117.5 163 40.5
MCO10G211 Micromonas commoda HOM05D006253 ORTHO05D007666 4.0e-24 115.5 162 41.4
SalBow3G2580 Salvia bowleyana HOM05D006253 ORTHO05D007666 7.5e-23 111.3 120 55.0
Ah.10g034240 Amaranthus hybridus HOM05D006253 ORTHO05D007666 3.1e-21 105.9 86 65.1
vmacro06019 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 9.1e-21 104.4 95 62.1
vmacro19500 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 1.0e-19 100.9 160 45.6
Gorai.005G238200 Gossypium raimondii HOM05D006253 ORTHO05D007666 2.9e-19 99.4 105 59.0
PRCOL_00001305 Prasinoderma coloniale HOM05D006253 ORTHO05D007666 7.2e-18 94.7 175 38.3
Sabra09G0078100 Salix brachista HOM05D006253 ORTHO05D007666 1.6e-17 93.6 86 65.1
Hma1.2p1_0804F.1_g221060 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 1.5e-15 87.0 71 66.2
Gohir.D02G210201 Gossypium hirsutum HOM05D006253 ORTHO05D007666 5.7e-15 85.1 105 55.2
Prupe.4G259300 Prunus persica HOM05D006253 ORTHO05D007666 4.1e-13 79.0 85 55.3
Prupe.2G172700 Prunus persica HOM05D006253 ORTHO05D007666 4.5e-12 75.5 47 78.7
Hma1.2p1_0674F.1_g201500 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 1.7e-11 73.6 58 67.2
Migut.N01188 Erythranthe guttata HOM05D006253 ORTHO05D007666 8.5e-11 71.2 59 62.7
ClCG05G009990 Citrullus lanatus HOM05D006253 ORTHO05D007666 1.1e-10 70.9 116 43.1
BolC1t00423H Brassica oleracea HOM05D000123 ORTHO05D009958 5.5e-10 68.6 40 85.0
Aqoxy5G01240 Aquilegia oxysepala HOM05D006253 ORTHO05D007666 7.2e-10 68.2 57 59.6
SEGI_00525 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 7.2e-10 68.2 58 60.3
Oeu025576.2 Olea europaea HOM05D006253 ORTHO05D007666 1.2e-09 67.4 63 60.3


User provided reference genes

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