Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p02810 Brassica napus HOM05D003331 ORTHO05D003264 4.6e-117 424.9 263 100.0
BraA01t00264Z Brassica rapa HOM05D003331 ORTHO05D003264 6.1e-101 371.3 222 100.0
BcaNung04885 Brassica carinata HOM05D003331 ORTHO05D003264 1.1e-78 297.4 232 82.8
BolC1t00299H Brassica oleracea HOM05D003331 ORTHO05D003264 7.2e-78 294.7 227 74.4
C01p03140 Brassica napus HOM05D003331 ORTHO05D003264 5.2e-76 288.5 224 74.1
BcaNung00784 Brassica carinata HOM05D003331 ORTHO05D003264 8.8e-76 287.7 224 74.1
Sp7g33680 Schrenkiella parvula HOM05D003331 ORTHO05D003264 6.3e-74 281.6 236 70.3
Carub.0007s0433 Capsella rubella HOM05D003331 ORTHO05D003264 4.7e-69 265.4 234 72.2
Thhalv10025822m.g Eutrema salsugineum HOM05D003331 ORTHO05D003264 8.0e-69 264.6 247 68.8
C07p61400 Brassica napus HOM05D003331 ORTHO05D003264 1.5e-67 260.4 233 71.7
BcaC01g00527 Brassica carinata HOM05D003331 ORTHO05D003264 2.0e-67 260.0 229 68.1
A08p21610 Brassica napus HOM05D003331 ORTHO05D003264 2.0e-67 260.0 227 69.2
BraA08t34108Z Brassica rapa HOM05D003331 ORTHO05D003264 2.0e-67 260.0 227 69.2
C03p80970 Brassica napus HOM05D003331 ORTHO05D003264 1.7e-66 256.9 229 67.7
BolC7t46566H Brassica oleracea HOM05D003331 ORTHO05D003264 3.7e-66 255.8 233 70.8
AT4G35900 Arabidopsis thaliana HOM05D003331 ORTHO05D003264 2.0e-64 250.0 241 68.0
BolC3t20356H Brassica oleracea HOM05D003331 ORTHO05D003264 2.3e-63 246.5 220 67.3
CARHR244290 Cardamine hirsuta HOM05D003331 ORTHO05D003264 1.1e-57 227.6 236 64.8
A03p63930 Brassica napus HOM05D003331 ORTHO05D003264 3.2e-57 226.1 229 68.6
BraA03t15462Z Brassica rapa HOM05D003331 ORTHO05D003264 3.2e-57 226.1 229 68.6
Aa31LG6G12860 Aethionema arabicum HOM05D003331 ORTHO05D003264 4.6e-56 222.2 247 61.1
BcaNung05055 Brassica carinata HOM05D003331 ORTHO05D003264 1.5e-46 190.7 178 68.5
THA.LOC104819740 Tarenaya hassleriana HOM05D003331 ORTHO05D003264 1.6e-37 160.6 228 55.7
THA.LOC104807508 Tarenaya hassleriana HOM05D003331 ORTHO05D003264 9.9e-35 151.4 229 54.1
Carub.0003s3191 Capsella rubella HOM05D003331 ORTHO05D003264 5.1e-31 139.0 166 57.8
AL3G50780 Arabidopsis lyrata HOM05D003331 ORTHO05D003264 2.8e-29 133.3 165 55.2
AT2G17770 Arabidopsis thaliana HOM05D003331 ORTHO05D003264 1.8e-28 130.6 225 46.2
CARHR108160 Cardamine hirsuta HOM05D003331 ORTHO05D003264 6.9e-28 128.6 162 52.5
Thecc.01G013300 Theobroma cacao HOM05D003331 ORTHO05D003264 2.7e-24 116.7 168 48.2
Manes.02G109000 Manihot esculenta HOM05D003331 ORTHO05D003264 6.0e-24 115.5 174 47.7
Manes.01G149900 Manihot esculenta HOM05D003331 ORTHO05D003264 7.8e-24 115.2 166 52.4
Duzib147G1072 Durio zibethinus HOM05D003331 ORTHO05D003264 4.3e-22 109.4 166 46.4
Sabra05G0089800 Salix brachista HOM05D003331 ORTHO05D003264 7.3e-22 108.6 176 44.9
QL06p051331 Quercus lobata HOM05D003331 ORTHO05D003264 8.1e-21 105.1 169 47.3
CiPaw.08G127600 Carya illinoinensis HOM05D003331 ORTHO05D003264 1.8e-20 104.0 176 45.5
Thhalv10023128m.g Eutrema salsugineum HOM05D003331 ORTHO05D003264 4.0e-20 102.8 165 48.5
Cfa007016 Carpinus fangiana HOM05D003331 ORTHO05D003264 2.6e-19 100.1 171 45.6
COL.COLO4_22478 Corchorus olitorius HOM05D003331 ORTHO05D003264 4.5e-19 99.4 167 45.5
Sp3g31180 Schrenkiella parvula HOM05D003331 ORTHO05D003264 4.5e-19 99.4 162 49.4
A09p11560 Brassica napus HOM05D003331 ORTHO05D003264 9.9e-19 98.2 168 47.0
Potri.005G109500 Populus trichocarpa HOM05D003331 ORTHO05D003264 9.9e-19 98.2 181 44.2
COL.COLO4_26108 Corchorus olitorius HOM05D003331 ORTHO05D003264 1.7e-18 97.4 170 47.1
Duzib264G0309 Durio zibethinus HOM05D003331 ORTHO05D003264 2.2e-18 97.1 170 44.7
Gohir.D11G179900 Gossypium hirsutum HOM05D003331 ORTHO05D003264 3.8e-18 96.3 168 44.6
Gorai.007G191800 Gossypium raimondii HOM05D003331 ORTHO05D003264 3.8e-18 96.3 168 44.6
BcaB03g16550 Brassica carinata HOM05D003331 ORTHO05D003264 4.9e-18 95.9 167 47.9
Gorai.003G007000 Gossypium raimondii HOM05D003331 ORTHO05D003264 8.4e-18 95.1 103 59.2
Gohir.A02G173200 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.1e-17 94.7 166 44.6
PGR102G0808 Punica granatum HOM05D003331 ORTHO05D003264 1.1e-17 94.7 177 46.3
Gohir.A11G172900 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.4e-17 94.4 168 44.6
TAR625G0644 Trochodendron aralioides HOM05D003331 ORTHO05D003264 3.2e-17 93.2 185 42.2
BcaC06g36320 Brassica carinata HOM05D003331 ORTHO05D003264 5.4e-17 92.4 167 45.5
Gohir.D03G006700 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.6e-16 90.9 101 60.4
A07p03180 Brassica napus HOM05D003331 ORTHO05D003264 3.5e-16 89.7 167 45.5
BraA07t28114Z Brassica rapa HOM05D003331 ORTHO05D003264 3.5e-16 89.7 167 45.5
Hma1.2p1_0561F.1_g178920 Hydrangea macrophylla HOM05D003331 ORTHO05D003264 7.9e-16 88.6 167 42.5
Thecc.08G048800 Theobroma cacao HOM05D003331 ORTHO05D003264 1.3e-15 87.8 171 44.4
TWI09G0177 Tripterygium wilfordii HOM05D003331 ORTHO05D003264 1.3e-15 87.8 163 42.3
BcaB07g31705 Brassica carinata HOM05D003331 ORTHO05D003264 2.3e-15 87.0 165 45.5
BraA09t36795Z Brassica rapa HOM05D003331 ORTHO05D003264 3.0e-15 86.7 166 45.8
BraA09t36802Z Brassica rapa HOM05D003331 ORTHO05D003264 3.9e-15 86.3 225 38.2
Haze_03715 Corylus avellana HOM05D003331 ORTHO05D003264 3.9e-15 86.3 170 41.8
BcaC04g22944 Brassica carinata HOM05D003331 ORTHO05D003264 8.7e-15 85.1 169 43.8
C09p13610 Brassica napus HOM05D003331 ORTHO05D003264 8.7e-15 85.1 169 43.8
BolC9t54251H Brassica oleracea HOM05D003331 ORTHO05D003264 8.7e-15 85.1 169 43.8
Cfa013989 Carpinus fangiana HOM05D003331 ORTHO05D003264 1.1e-14 84.7 186 41.9
Sabra05G0188500 Salix brachista HOM05D003331 ORTHO05D003264 1.1e-14 84.7 179 42.5
Dinv08561 Davidia involucrata HOM05D003331 ORTHO05D003264 1.9e-14 84.0 179 41.9
C07p05420 Brassica napus HOM05D003331 ORTHO05D003264 2.5e-14 83.6 167 44.3
Haze_22676 Corylus avellana HOM05D003331 ORTHO05D003264 2.5e-14 83.6 183 39.3
Potri.005G243400 Populus trichocarpa HOM05D003331 ORTHO05D003264 4.3e-14 82.8 174 41.4
BolC7t40942H Brassica oleracea HOM05D003331 ORTHO05D003264 9.6e-14 81.6 167 43.7
Nn2g14480 Nelumbo nucifera HOM05D003331 ORTHO05D003264 2.1e-13 80.5 181 41.4
Actinidia02367 Actinidia chinensis HOM05D003331 ORTHO05D003264 4.8e-13 79.3 170 39.4
CANSAT01G0941 Cannabis sativa HOM05D003331 ORTHO05D003264 6.2e-13 79.0 182 41.8
GSVIVG01009970001 Vitis vinifera HOM05D003331 ORTHO05D003264 8.1e-13 78.6 160 39.4
Gohir.D05G187300 Gossypium hirsutum HOM05D003331 ORTHO05D003264 1.8e-12 77.4 173 41.6
TWI53G1588 Tripterygium wilfordii HOM05D003331 ORTHO05D003264 2.4e-12 77.0 172 39.5
Duzib093G0576 Durio zibethinus HOM05D003331 ORTHO05D003264 5.3e-12 75.9 160 41.2
Aqoxy6G02126 Aquilegia oxysepala HOM05D003331 ORTHO05D003264 6.9e-12 75.5 174 39.7
Gorai.009G192500 Gossypium raimondii HOM05D003331 ORTHO05D003264 6.9e-12 75.5 173 41.0
Manes.05G144400 Manihot esculenta HOM05D003331 ORTHO05D003264 6.9e-12 75.5 174 40.8
Manes.18G012121 Manihot esculenta HOM05D003331 ORTHO05D003264 9.0e-12 75.1 169 40.2
CAN.G225.18 Capsicum annuum HOM05D000004 ORTHO05D000002 1.5e-11 74.3 166 38.0
Gohir.A05G184500 Gossypium hirsutum HOM05D003331 ORTHO05D003264 2.6e-11 73.6 178 39.9
Cpa.g.sc6.298 Carica papaya HOM05D003331 ORTHO05D003264 3.4e-11 73.2 132 43.9
MBI08_g06420_MAGBIO Magnolia biondii HOM05D003331 ORTHO05D003264 3.4e-11 73.2 180 40.0
QL02p012465 Quercus lobata HOM05D003331 ORTHO05D003264 1.3e-10 71.2 188 37.2
Atru.chr13.244 Acer truncatum HOM05D003331 ORTHO05D003264 2.9e-10 70.1 211 36.5
Medtr5g022780 Medicago truncatula HOM05D003331 ORTHO05D003264 2.9e-10 70.1 197 36.0
Lj2g0025662 Lotus japonicus HOM05D003331 ORTHO05D003264 1.1e-09 68.2 186 38.2
CiPaw.08G068400 Carya illinoinensis HOM05D003331 ORTHO05D003264 4.2e-09 66.2 105 42.9
CiPaw.07G145300 Carya illinoinensis HOM05D003331 ORTHO05D003264 9.3e-09 65.1 166 41.0
TAR628G1529 Trochodendron aralioides HOM05D003331 ORTHO05D003264 9.3e-09 65.1 172 37.2
Prupe.7G173300 Prunus persica HOM05D003331 ORTHO05D003264 2.1e-08 63.9 204 33.8
Ciclev10003845m.g Citrus clementina HOM05D003331 ORTHO05D003264 2.7e-08 63.5 179 37.4
CAN.G890.4 Capsicum annuum HOM05D003331 ORTHO05D003264 4.6e-08 62.8 167 38.3
Oeu020389.1 Olea europaea HOM05D003331 ORTHO05D003264 4.6e-08 62.8 163 38.0
Peaxi162Scf00439g00042 Petunia axillaris HOM05D003331 ORTHO05D003264 4.6e-08 62.8 175 38.3
Gohir.D01G096500 Gossypium hirsutum HOM05D003331 ORTHO05D003264 6.0e-08 62.4 171 39.2
Psat2g152560 Pisum sativum HOM05D003331 ORTHO05D003264 6.0e-08 62.4 195 34.4
Gohir.A01G109700 Gossypium hirsutum HOM05D003331 ORTHO05D003264 7.9e-08 62.0 162 38.9
Gorai.002G122200 Gossypium raimondii HOM05D003331 ORTHO05D003264 7.9e-08 62.0 162 38.9
RcHm_v2.0_Chr2g0098731 Rosa chinensis HOM05D003331 ORTHO05D003264 1.0e-07 61.6 186 34.4
Sopen02g012950 Solanum pennellii HOM05D003331 ORTHO05D003264 1.3e-07 61.2 164 36.0
MD15G1240800 Malus domestica HOM05D003331 ORTHO05D003264 2.3e-07 60.5 169 35.5
GSVIVG01006332001 Vitis vinifera HOM05D003331 ORTHO05D003264 3.0e-07 60.1 150 38.0
Eucgr.J02482 Eucalyptus grandis HOM05D003331 ORTHO05D003264 5.1e-07 59.3 177 37.9
Hund16511 Selenicereus undatus HOM05D003331 ORTHO05D003264 5.1e-07 59.3 182 37.9
Nitab4.5_0002337g0180 Nicotiana tabacum HOM05D003331 ORTHO05D003264 8.7e-07 58.5 176 37.5
Gorai.009G269300 Gossypium raimondii HOM05D003331 ORTHO05D003264 1.1e-06 58.2 167 37.7
VMungo1215G2112 Vigna mungo HOM05D003331 ORTHO05D003264 1.1e-06 58.2 164 39.6
Medtr7g015990 Medicago truncatula HOM05D003331 ORTHO05D003264 1.5e-06 57.8 40 77.5
Nitab4.5_0000188g0190 Nicotiana tabacum HOM05D003331 ORTHO05D003264 1.5e-06 57.8 173 35.3
PGSC0003DMG400023897 Solanum tuberosum HOM05D003331 ORTHO05D003264 1.5e-06 57.8 168 36.3
Nitab4.5_0001789g0110 Nicotiana tabacum HOM05D003331 ORTHO05D003264 4.3e-06 56.2 168 35.7
Rhsim08G0031400 Rhododendron simsii HOM05D003331 ORTHO05D003264 4.3e-06 56.2 174 36.8
Rhsim10G0207400 Rhododendron simsii HOM05D003331 ORTHO05D003264 5.6e-06 55.8 172 34.3
SalBow3G1427 Salvia bowleyana HOM05D003331 ORTHO05D003264 7.4e-06 55.5 47 68.1
SalBow3G2852 Salvia bowleyana HOM05D003331 ORTHO05D003264 7.4e-06 55.5 105 46.7
Oeu033812.1 Olea europaea HOM05D003331 ORTHO05D003264 9.6e-06 55.1 167 34.1
Sopen02g028310 Solanum pennellii HOM05D003331 ORTHO05D003264 9.6e-06 55.1 168 36.3


User provided reference genes

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