Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p02730 Brassica napus HOM05D007446 ORTHO05D009376 1.1e-41 172.9 89 100.0
BolC1t00289H Brassica oleracea HOM05D007446 ORTHO05D009376 1.1e-41 172.9 89 100.0
C01p03030 Brassica napus HOM05D007446 ORTHO05D009376 3.1e-41 171.4 89 98.9
BcaNung00774 Brassica carinata HOM05D007446 ORTHO05D009376 4.1e-41 171.0 89 98.9
BraA01t00259Z Brassica rapa HOM05D007446 ORTHO05D009376 4.1e-41 171.0 89 98.9
Sp7g33750 Schrenkiella parvula HOM05D007446 ORTHO05D009376 1.5e-40 169.1 89 96.6
Thhalv10026680m.g Eutrema salsugineum HOM05D007446 ORTHO05D009376 2.6e-40 168.3 89 96.6
Carub.0007s0425 Capsella rubella HOM05D007446 ORTHO05D009376 4.5e-40 167.5 89 95.5
AL7G15070 Arabidopsis lyrata HOM05D007446 ORTHO05D009376 2.2e-39 165.2 89 94.4
Aa31LG6G12930 Aethionema arabicum HOM05D007446 ORTHO05D009376 2.9e-39 164.9 89 94.4
THA.LOC104804270 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 3.6e-37 157.9 89 89.9
AT4G35980 Arabidopsis thaliana HOM05D007446 ORTHO05D009376 7.4e-35 150.2 89 87.6
Rhsim10G0209600 Rhododendron simsii HOM05D007446 ORTHO05D009376 5.3e-33 144.1 89 83.1
vmacro22147 Vaccinium macrocarpon HOM05D007446 ORTHO05D009376 2.0e-32 142.1 88 84.1
ClCG01G020420 Citrullus lanatus HOM05D007446 ORTHO05D009376 3.5e-32 141.4 89 80.9
GSVIVG01018747001 Vitis vinifera HOM05D007446 ORTHO05D009376 5.9e-32 140.6 86 82.6
Potri.005G111900 Populus trichocarpa HOM05D007446 ORTHO05D009376 7.7e-32 140.2 89 80.9
Sabra05G0091700 Salix brachista HOM05D007446 ORTHO05D009376 7.7e-32 140.2 89 80.9
Atru.chr3.842 Acer truncatum HOM05D007446 ORTHO05D009376 1.0e-31 139.8 89 79.8
Prupe.7G170900 Prunus persica HOM05D007446 ORTHO05D009376 1.3e-31 139.4 86 81.4
CiPaw.08G130000 Carya illinoinensis HOM05D007446 ORTHO05D009376 3.8e-31 137.9 89 79.8
Actinidia17426 Actinidia chinensis HOM05D007446 ORTHO05D009376 6.5e-31 137.1 89 78.7
Cc07_g11000 Coffea canephora HOM05D007446 ORTHO05D009376 6.5e-31 137.1 89 77.5
MD02G1128000 Malus domestica HOM05D007446 ORTHO05D009376 8.5e-31 136.7 86 77.9
Manes.02G106000 Manihot esculenta HOM05D007446 ORTHO05D009376 1.1e-30 136.3 89 79.8
Lalb_Chr05g0229761 Lupinus albus HOM05D007446 ORTHO05D009376 1.9e-30 135.6 89 78.7
TWI09G0145 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 1.9e-30 135.6 89 76.4
TWI73G1016 Tripterygium wilfordii HOM05D007446 ORTHO05D009376 2.5e-30 135.2 89 76.4
FvH4_1g11510 Fragaria vesca HOM05D007446 ORTHO05D009376 5.5e-30 134.0 86 80.2
RcHm_v2.0_Chr2g0099131 Rosa chinensis HOM05D007446 ORTHO05D009376 5.5e-30 134.0 86 80.2
CAN.G1274.24 Capsicum annuum HOM05D007446 ORTHO05D009376 7.2e-30 133.7 86 77.9
Thecc.01G015400 Theobroma cacao HOM05D007446 ORTHO05D009376 7.2e-30 133.7 88 77.3
EL10Ac6g15495 Beta vulgaris HOM05D007446 ORTHO05D009376 2.7e-29 131.7 89 74.2
CAN.G1817.7 Capsicum annuum HOM05D007446 ORTHO05D009376 2.7e-29 131.7 88 76.1
Duzib264G0432 Durio zibethinus HOM05D007446 ORTHO05D009376 2.7e-29 131.7 81 82.7
Lj4g0002006 Lotus japonicus HOM05D007446 ORTHO05D009376 2.7e-29 131.7 89 75.3
Hund14058 Selenicereus undatus HOM05D007446 ORTHO05D009376 2.7e-29 131.7 89 73.0
Gohir.D11G181100 Gossypium hirsutum HOM05D007446 ORTHO05D009376 3.6e-29 131.3 81 84.0
Gorai.007G193000 Gossypium raimondii HOM05D007446 ORTHO05D009376 3.6e-29 131.3 81 84.0
SalBow3G1068 Salvia bowleyana HOM05D007446 ORTHO05D009376 3.6e-29 131.3 86 76.7
CSS0009543 Camellia sinensis var. sinensis HOM05D007446 ORTHO05D009376 4.7e-29 131.0 89 77.5
Cpa.g.sc6.279 Carica papaya HOM05D007446 ORTHO05D009376 4.7e-29 131.0 88 76.1
AUR62003348 Chenopodium quinoa HOM05D007446 ORTHO05D009376 4.7e-29 131.0 89 75.3
Ciclev10026855m.g Citrus clementina HOM05D007446 ORTHO05D009376 4.7e-29 131.0 89 71.9
Hma1.2p1_0869F.1_g230750 Hydrangea macrophylla HOM05D007446 ORTHO05D009376 8.0e-29 130.2 85 75.3
Eucgr.J02461 Eucalyptus grandis HOM05D007446 ORTHO05D009376 1.0e-28 129.8 89 77.5
HanXRQChr09g0256761 Helianthus annuus HOM05D007446 ORTHO05D009376 1.0e-28 129.8 89 73.0
PGSC0003DMG400003579 Solanum tuberosum HOM05D007446 ORTHO05D009376 1.0e-28 129.8 86 75.6
AUR62029488 Chenopodium quinoa HOM05D007446 ORTHO05D009376 1.4e-28 129.4 89 74.2
AUR62043833 Chenopodium quinoa HOM05D007446 ORTHO05D009376 1.4e-28 129.4 89 74.2
Peaxi162Scf00328g00716 Petunia axillaris HOM05D007446 ORTHO05D009376 1.8e-28 129.0 86 75.6
Cfa006995 Carpinus fangiana HOM05D007446 ORTHO05D009376 2.3e-28 128.6 84 78.6
FAN23G0535 Fragaria x ananassa HOM05D000971 ORTHO05D000901 2.3e-28 128.6 85 77.6
QL06p051006 Quercus lobata HOM05D007446 ORTHO05D009376 2.3e-28 128.6 82 79.3
Solyc02g083650.3 Solanum lycopersicum HOM05D007446 ORTHO05D009376 2.3e-28 128.6 86 74.4
arahy.Tifrunner.gnm1.ann1.786IJB Arachis hypogaea HOM05D007446 ORTHO05D009376 3.0e-28 128.3 85 77.6
arahy.Tifrunner.gnm1.ann1.RW313X Arachis hypogaea HOM05D007446 ORTHO05D009376 3.0e-28 128.3 85 77.6
CsaV3_6G047300 Cucumis sativus L. HOM05D007446 ORTHO05D009376 3.0e-28 128.3 84 77.4
Sopen02g028430 Solanum pennellii HOM05D007446 ORTHO05D009376 3.0e-28 128.3 86 74.4
Haze_03737 Corylus avellana HOM05D007446 ORTHO05D009376 4.0e-28 127.9 84 77.4
ECA232G4023 Erigeron canadensis HOM05D007446 ORTHO05D009376 4.0e-28 127.9 89 73.0
PGR119G1403 Punica granatum HOM05D007446 ORTHO05D009376 4.0e-28 127.9 89 76.4
Migut.H02175 Erythranthe guttata HOM05D007446 ORTHO05D009376 6.7e-28 127.1 85 75.3
Dinv40111 Davidia involucrata HOM05D007446 ORTHO05D009376 8.8e-28 126.7 81 77.8
CANSAT25G1207 Cannabis sativa HOM05D007446 ORTHO05D009376 1.5e-27 125.9 91 69.2
THA.LOC109115992 Tarenaya hassleriana HOM05D007446 ORTHO05D009376 1.5e-27 125.9 82 80.5
SGA_v2.0_scaffold74G24537 Striga asiatica HOM05D007446 ORTHO05D009376 9.7e-27 123.2 81 71.6
Ah.03g149050 Amaranthus hybridus HOM05D007446 ORTHO05D009376 1.3e-26 122.9 89 71.9
FAN26G2670 Fragaria x ananassa HOM05D007446 ORTHO05D009376 2.2e-26 122.1 81 77.8
Medtr8g075290 Medicago truncatula HOM05D007446 ORTHO05D009376 2.2e-26 122.1 89 68.5
TPR.G19502 Trifolium pratense HOM05D007446 ORTHO05D009376 2.2e-26 122.1 89 68.5
Lsat_1_v5_gn_4_145721 Lactuca sativa HOM05D007446 ORTHO05D009376 2.4e-25 118.6 86 68.6
Phvul.003G264800 Phaseolus vulgaris HOM05D007446 ORTHO05D009376 1.6e-24 115.9 88 67.0
Glyma.16G124800 Glycine max HOM05D007446 ORTHO05D009376 5.9e-24 114.0 85 69.4
Psat4g101880 Pisum sativum HOM05D007446 ORTHO05D009376 1.7e-23 112.5 89 65.2
FAN19G2392 Fragaria x ananassa HOM05D000971 ORTHO05D000901 2.2e-23 112.1 74 78.4
Nn7g37082 Nelumbo nucifera HOM05D007446 ORTHO05D009376 2.2e-23 112.1 87 66.7
TPR.G25793 Trifolium pratense HOM05D000002 ORTHO05D000001 3.8e-23 111.3 83 66.3
MELO3C007921.2 Cucumis melo HOM05D007446 ORTHO05D009376 5.0e-23 110.9 72 77.8
FAN28G0109 Fragaria x ananassa HOM05D000971 ORTHO05D000901 5.0e-23 110.9 76 75.0
Psat4g101720 Pisum sativum HOM05D007446 ORTHO05D009376 1.9e-22 109.0 89 64.0
Sed0007439 Sechium edule HOM05D007446 ORTHO05D009376 7.2e-22 107.1 72 76.4
Nitab4.5_0001658g0040 Nicotiana tabacum HOM05D007446 ORTHO05D009376 1.4e-20 102.8 69 73.9
DCAR_023140 Daucus carota HOM05D000372 ORTHO05D004502 1.8e-20 102.4 83 67.5
unitig_899.g14718 Utricularia gibba HOM05D007446 ORTHO05D009376 6.8e-20 100.5 81 66.7
Gorai.007G317400 Gossypium raimondii HOM05D007446 ORTHO05D009376 8.8e-20 100.1 75 77.3
Nitab4.5_0001892g0060 Nicotiana tabacum HOM05D007446 ORTHO05D009376 8.8e-20 100.1 69 72.5
Gohir.D11G294266 Gossypium hirsutum HOM05D007446 ORTHO05D009376 2.0e-19 99.0 77 74.0
TAR636G2489 Trochodendron aralioides HOM05D007446 ORTHO05D009376 2.0e-19 99.0 84 60.7
Sc07g0001100 Simmondsia chinensis HOM05D007446 ORTHO05D009376 7.5e-19 97.1 73 63.0
Sc07g0001150 Simmondsia chinensis HOM05D007446 ORTHO05D009376 1.7e-18 95.9 73 64.4
Oeu007438.1 Olea europaea HOM05D007446 ORTHO05D009376 4.8e-18 94.4 64 76.6
MD15G1243200 Malus domestica HOM05D007446 ORTHO05D009376 1.1e-17 93.2 61 75.4
DCAR_011601 Daucus carota HOM05D007446 ORTHO05D009376 2.4e-17 92.0 83 62.7
Os05g0352800 Oryza sativa ssp. japonica HOM05D007446 ORTHO05D009376 7.0e-17 90.5 75 64.0
HPP92_012021 Vanilla planifolia HOM05D007446 ORTHO05D009376 7.0e-17 90.5 77 62.3
ATR0681G038 Amborella trichopoda HOM05D007446 ORTHO05D009376 1.2e-16 89.7 82 57.3
Gohir.A11G174000 Gossypium hirsutum HOM05D007446 ORTHO05D009376 1.6e-16 89.4 56 83.9
Oeu054756.1 Olea europaea HOM05D007446 ORTHO05D009376 3.5e-16 88.2 62 72.6
PGSC0003DMG400022557 Solanum tuberosum HOM05D007446 ORTHO05D009376 1.5e-14 82.8 64 68.8
Mapoly0007s0006 Marchantia polymorpha HOM05D007446 ORTHO05D009376 2.8e-13 78.6 74 54.1
Psat0s2733g0120 Pisum sativum HOM05D007446 ORTHO05D009376 6.1e-13 77.4 96 53.1
SalBow3G4512 Salvia bowleyana HOM05D007446 ORTHO05D009376 1.0e-12 76.6 50 70.0
Glyma.02G046300 Glycine max HOM05D007446 ORTHO05D009376 2.3e-12 75.5 50 72.0
Pp3c23_18910 Physcomitrium patens HOM05D007446 ORTHO05D009376 5.7e-11 70.9 59 55.9
Actinidia22956 Actinidia chinensis HOM05D007446 ORTHO05D009376 9.8e-11 70.1 89 53.9
Zm00001eb428230 Zea mays HOM05D007446 ORTHO05D009376 1.4e-09 66.2 56 62.5
AagrBONN_evm.TU.Sc2ySwM_228.3577 Anthoceros agrestis HOM05D007446 ORTHO05D009376 2.7e-08 62.0 62 45.2


User provided reference genes

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