Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 2.0e-187 659.8 625 100.0
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 5.9e-187 658.3 625 99.8
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 3.8e-141 506.1 553 81.0
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 1.5e-137 494.2 633 81.8
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 7.3e-137 491.9 549 81.8
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 2.0e-110 404.1 568 62.7
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 3.8e-69 266.9 164 80.5
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 2.0e-65 254.6 165 72.7
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 5.7e-65 253.1 165 74.5
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 9.8e-65 252.3 165 74.5
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 9.8e-65 252.3 165 74.5
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 1.7e-64 251.5 165 73.9
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 2.2e-64 251.1 165 73.9
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 4.8e-64 250.0 165 73.3
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 6.3e-64 249.6 165 74.5
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 8.3e-64 249.2 165 72.1
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 1.1e-63 248.8 163 73.6
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 1.4e-63 248.4 165 73.9
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 3.1e-63 247.3 165 72.7
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 3.1e-63 247.3 165 73.3
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 4.1e-63 246.9 165 73.9
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 4.1e-63 246.9 165 73.3
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 7.0e-63 246.1 164 74.4
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 7.0e-63 246.1 166 73.5
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 9.1e-63 245.7 164 73.2
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 9.1e-63 245.7 162 73.5
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 1.2e-62 245.4 165 73.9
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.2e-62 245.4 165 73.3
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 1.2e-62 245.4 163 74.2
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 1.2e-62 245.4 165 72.7
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 1.6e-62 245.0 165 73.3
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 1.6e-62 245.0 165 72.7
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 2.0e-62 244.6 165 72.1
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 2.0e-62 244.6 164 73.2
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 2.0e-62 244.6 165 72.1
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 2.7e-62 244.2 165 71.5
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 2.7e-62 244.2 160 74.4
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 2.7e-62 244.2 160 74.4
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 2.7e-62 244.2 165 72.1
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 4.5e-62 243.4 163 73.6
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 4.5e-62 243.4 165 72.7
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 4.5e-62 243.4 166 72.9
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 5.9e-62 243.0 164 72.6
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 5.9e-62 243.0 159 73.6
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 7.7e-62 242.7 164 71.3
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 1.0e-61 242.3 159 74.2
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 1.0e-61 242.3 165 70.9
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 1.0e-61 242.3 164 72.0
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 1.3e-61 241.9 163 71.8
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 1.3e-61 241.9 165 73.9
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 1.7e-61 241.5 162 72.2
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 2.3e-61 241.1 165 71.5
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 2.3e-61 241.1 159 73.6
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 2.9e-61 240.7 159 73.6
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 2.9e-61 240.7 159 73.6
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 3.8e-61 240.4 162 72.2
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 3.8e-61 240.4 164 71.3
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 5.0e-61 240.0 159 74.2
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 6.6e-61 239.6 160 73.1
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 6.6e-61 239.6 158 73.4
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 6.6e-61 239.6 160 71.2
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 6.6e-61 239.6 160 73.1
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 1.5e-60 238.4 164 72.0
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 1.9e-60 238.0 160 73.1
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 2.5e-60 237.7 160 71.9
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 3.3e-60 237.3 160 71.2
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 3.3e-60 237.3 160 72.5
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 3.3e-60 237.3 162 69.8
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 4.2e-60 236.9 160 71.9
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 4.2e-60 236.9 159 71.7
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 4.2e-60 236.9 159 73.0
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 5.5e-60 236.5 165 70.9
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 9.5e-60 235.7 165 67.9
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 9.5e-60 235.7 165 70.3
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 1.2e-59 235.3 160 71.2
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 1.2e-59 235.3 160 70.0
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 1.2e-59 235.3 160 70.6
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 1.6e-59 235.0 165 70.9
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 1.6e-59 235.0 165 69.1
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 2.1e-59 234.6 165 71.5
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 2.1e-59 234.6 165 71.5
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 3.6e-59 233.8 160 71.9
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 3.6e-59 233.8 165 71.5
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 4.7e-59 233.4 159 72.3
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 1.0e-58 232.3 160 70.0
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 1.4e-58 231.9 165 70.3
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 4.0e-58 230.3 155 72.3
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 8.9e-58 229.2 155 71.6
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 2.0e-57 228.0 154 71.4
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 2.0e-57 228.0 159 69.2
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 3.4e-57 227.3 153 72.5
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 5.7e-57 226.5 158 69.6
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 1.3e-56 225.3 165 68.5
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 1.6e-54 218.4 159 66.0
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 5.9e-54 216.5 151 69.5
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 7.8e-54 216.1 147 70.7
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 3.9e-53 213.8 167 66.5
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 3.9e-53 213.8 162 66.7
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 3.3e-52 210.7 165 65.5
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 3.3e-52 210.7 167 65.3
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 1.8e-50 204.9 164 62.8
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 2.9e-48 197.6 166 60.8
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 5.6e-44 183.3 163 59.5
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 5.6e-44 183.3 163 59.5
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.2e-43 182.2 114 78.9
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 3.1e-42 177.6 166 57.2
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 3.1e-42 177.6 166 57.2
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 9.2e-31 139.4 162 48.8
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 1.3e-29 135.6 152 49.3
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 8.9e-26 122.9 167 44.3
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 6.4e-24 116.7 166 41.6
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 1.6e-19 102.1 160 41.9
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 1.2e-14 85.9 139 36.7
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 2.5e-12 78.2 62 64.5
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 4.8e-11 73.9 111 40.5
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 5.3e-10 70.5 95 46.3
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 4.9e-08 63.9 82 43.9


User provided reference genes

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