Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p01920 Brassica napus HOM05D006676 ORTHO05D008394 4.3e-88 328.2 191 100.0
BcaNung03502 Brassica carinata HOM05D006676 ORTHO05D008394 3.8e-84 315.1 191 94.2
BraA01t00181Z Brassica rapa HOM05D006676 ORTHO05D008394 1.4e-83 313.2 191 92.7
C01p02080 Brassica napus HOM05D006676 ORTHO05D008394 7.1e-83 310.8 191 93.7
BolC1t00200H Brassica oleracea HOM05D006676 ORTHO05D008394 7.1e-83 310.8 191 93.7
Thhalv10026327m.g Eutrema salsugineum HOM05D006676 ORTHO05D008394 5.3e-62 241.5 190 76.3
Sp7g34680 Schrenkiella parvula HOM05D006676 ORTHO05D008394 2.0e-61 239.6 182 75.3
BraA08t34206Z Brassica rapa HOM05D006676 ORTHO05D008394 2.9e-60 235.7 189 79.9
CARHR245420 Cardamine hirsuta HOM05D006676 ORTHO05D008394 1.2e-58 230.3 192 74.0
AL7G13870 Arabidopsis lyrata HOM05D006676 ORTHO05D008394 6.7e-57 224.6 191 73.8
BolC3t20221H Brassica oleracea HOM05D006676 ORTHO05D008394 6.7e-57 224.6 178 73.6
BcaC01g00433 Brassica carinata HOM05D006676 ORTHO05D008394 8.7e-57 224.2 179 74.3
C03p79700 Brassica napus HOM05D006676 ORTHO05D008394 8.7e-57 224.2 179 74.3
Carub.0007s0328 Capsella rubella HOM05D006676 ORTHO05D008394 7.4e-56 221.1 195 72.8
AT4G37090 Arabidopsis thaliana HOM05D006676 ORTHO05D008394 8.1e-55 217.6 189 68.3
A08p22510 Brassica napus HOM05D006676 ORTHO05D008394 5.8e-53 211.5 178 77.0
Aa31LG6G13890 Aethionema arabicum HOM05D006676 ORTHO05D008394 1.4e-43 180.3 175 61.1
Thecc.01G046000 Theobroma cacao HOM05D006676 ORTHO05D008394 1.8e-30 136.7 178 51.1
COL.COLO4_22185 Corchorus olitorius HOM05D006676 ORTHO05D008394 3.1e-30 136.0 179 50.3
Gohir.A02G161300 Gossypium hirsutum HOM05D006676 ORTHO05D008394 1.2e-29 134.0 177 48.6
Duzib187G2000 Durio zibethinus HOM05D006676 ORTHO05D008394 1.5e-29 133.7 177 50.8
Gohir.D03G019200 Gossypium hirsutum HOM05D006676 ORTHO05D008394 1.5e-29 133.7 177 48.6
Gorai.003G019600 Gossypium raimondii HOM05D006676 ORTHO05D008394 1.0e-28 131.0 177 47.5
PGR102G2956 Punica granatum HOM05D006676 ORTHO05D008394 1.3e-28 130.6 171 49.1
MD02G1159200 Malus domestica HOM05D006676 ORTHO05D008394 6.5e-28 128.3 179 46.9
Manes.13G131900 Manihot esculenta HOM05D006676 ORTHO05D008394 6.5e-28 128.3 176 47.7
QL06p044204 Quercus lobata HOM05D006676 ORTHO05D008394 3.2e-27 125.9 177 46.3
Prupe.7G145000 Prunus persica HOM05D006676 ORTHO05D008394 4.2e-27 125.6 186 44.6
ECA232G0167 Erigeron canadensis HOM05D006676 ORTHO05D008394 2.1e-26 123.2 175 48.6
Hma1.2p1_0261F.1_g105020 Hydrangea macrophylla HOM05D006676 ORTHO05D008394 3.6e-26 122.5 178 46.1
TWI09G1529 Tripterygium wilfordii HOM05D006676 ORTHO05D008394 6.1e-26 121.7 183 43.7
MD00G1067500 Malus domestica HOM05D006676 ORTHO05D008394 1.0e-25 120.9 174 44.8
FAN23G1040 Fragaria x ananassa HOM05D006676 ORTHO05D008394 1.8e-25 120.2 184 42.9
CiPaw.01G028300 Carya illinoinensis HOM05D006676 ORTHO05D008394 3.9e-25 119.0 181 44.8
Dinv26772 Davidia involucrata HOM05D006676 ORTHO05D008394 5.2e-25 118.6 180 44.4
BcaB03g12363 Brassica carinata HOM05D006676 ORTHO05D008394 8.8e-25 117.9 187 49.2
Sopen02g015580 Solanum pennellii HOM05D006676 ORTHO05D008394 1.5e-24 117.1 168 44.0
ClCG02G013070 Citrullus lanatus HOM05D006676 ORTHO05D008394 2.6e-24 116.3 177 46.9
Eucgr.H01944 Eucalyptus grandis HOM05D006676 ORTHO05D008394 2.6e-24 116.3 175 45.1
Nn6g32155 Nelumbo nucifera HOM05D006676 ORTHO05D008394 3.3e-24 115.9 169 45.6
Lj2g0022488 Lotus japonicus HOM05D006676 ORTHO05D008394 9.7e-24 114.4 180 43.3
Potri.007G034600 Populus trichocarpa HOM05D006676 ORTHO05D008394 9.7e-24 114.4 172 47.7
CANSAT01G0168 Cannabis sativa HOM05D006676 ORTHO05D008394 1.7e-23 113.6 188 43.6
Glyma.11G060600 Glycine max HOM05D006676 ORTHO05D008394 2.2e-23 113.2 166 45.8
Sed0003061 Sechium edule HOM05D006676 ORTHO05D008394 2.2e-23 113.2 184 42.9
TAR625G0739 Trochodendron aralioides HOM05D006676 ORTHO05D008394 2.8e-23 112.8 168 47.0
Lalb_Chr05g0213091 Lupinus albus HOM05D006676 ORTHO05D008394 4.8e-23 112.1 180 42.2
Glyma.01G182300 Glycine max HOM05D006676 ORTHO05D008394 6.3e-23 111.7 166 45.2
Actinidia36526 Actinidia chinensis HOM05D006676 ORTHO05D008394 1.1e-22 110.9 178 44.4
arahy.Tifrunner.gnm1.ann1.TQQ6DV Arachis hypogaea HOM05D006676 ORTHO05D008394 1.4e-22 110.5 174 44.8
Actinidia12084 Actinidia chinensis HOM05D006676 ORTHO05D008394 3.1e-22 109.4 183 43.7
EL10Ac6g14836 Beta vulgaris HOM05D006676 ORTHO05D008394 4.1e-22 109.0 182 40.1
CsaV3_2G017150 Cucumis sativus L. HOM05D006676 ORTHO05D008394 5.3e-22 108.6 184 42.4
Ciclev10026596m.g Citrus clementina HOM05D006676 ORTHO05D008394 7.0e-22 108.2 185 42.2
Lj7A15T51 Lonicera japonica HOM05D006676 ORTHO05D008394 9.1e-22 107.8 176 43.8
MSTRG.15406 Avicennia marina HOM05D006676 ORTHO05D008394 1.2e-21 107.5 181 40.9
RcHm_v2.0_Chr2g0103301 Rosa chinensis HOM05D006676 ORTHO05D008394 2.6e-21 106.3 183 38.3
FvH4_1g14550 Fragaria vesca HOM05D006676 ORTHO05D008394 3.5e-21 105.9 184 39.7
FAN19G1679 Fragaria x ananassa HOM05D006676 ORTHO05D008394 5.9e-21 105.1 184 39.7
VMungo1215G3052 Vigna mungo HOM05D006676 ORTHO05D008394 5.9e-21 105.1 178 40.4
Phvul.002G023300 Phaseolus vulgaris HOM05D006676 ORTHO05D008394 7.7e-21 104.8 180 39.4
HanXRQChr15g0489591 Helianthus annuus HOM05D006676 ORTHO05D008394 1.0e-20 104.4 174 43.7
MELO3C020918.2 Cucumis melo HOM05D006676 ORTHO05D008394 1.7e-20 103.6 185 41.1
FAN26G0249 Fragaria x ananassa HOM05D006676 ORTHO05D008394 1.7e-20 103.6 184 39.7
arahy.Tifrunner.gnm1.ann1.A5DXZZ Arachis hypogaea HOM05D006676 ORTHO05D008394 2.9e-20 102.8 174 42.5
Psat2g163920 Pisum sativum HOM05D006676 ORTHO05D008394 2.9e-20 102.8 184 41.8
Duzib147G0589 Durio zibethinus HOM05D006676 ORTHO05D008394 3.8e-20 102.4 179 41.9
CDE02G4077 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 6.5e-20 101.7 169 45.0
Ca_24806_v3 Cicer arietinum L. HOM05D006676 ORTHO05D008394 6.5e-20 101.7 180 40.0
PSO675G6281 Papaver somniferum HOM05D006676 ORTHO05D008394 8.5e-20 101.3 176 42.0
BcaB03g12365 Brassica carinata HOM05D006676 ORTHO05D008394 1.9e-19 100.1 58 87.9
Cc07_g05420 Coffea canephora HOM05D006676 ORTHO05D008394 4.2e-19 99.0 179 39.7
FAN28G2791 Fragaria x ananassa HOM05D006676 ORTHO05D008394 4.2e-19 99.0 183 38.3
Solyc02g065370.3 Solanum lycopersicum HOM05D006676 ORTHO05D008394 5.5e-19 98.6 168 40.5
Sabra07G0030200 Salix brachista HOM05D001814 ORTHO05D001845 7.2e-19 98.2 191 38.7
Cpa.g.sc15.74 Carica papaya HOM05D006676 ORTHO05D008394 1.2e-18 97.4 138 47.1
Cfa004230 Carpinus fangiana HOM05D006676 ORTHO05D008394 1.2e-18 97.4 148 42.6
DCAR_025672 Daucus carota HOM05D006676 ORTHO05D008394 1.2e-18 97.4 143 46.2
Hund14112 Selenicereus undatus HOM05D006676 ORTHO05D008394 1.6e-18 97.1 178 36.5
arahy.Tifrunner.gnm1.ann1.MI0500 Arachis hypogaea HOM05D006676 ORTHO05D008394 2.7e-18 96.3 176 42.0
AUR62027231 Chenopodium quinoa HOM05D006676 ORTHO05D008394 6.1e-18 95.1 175 39.4
Os02g0186700 Oryza sativa ssp. japonica HOM05D006676 ORTHO05D008394 6.1e-18 95.1 178 38.2
HPP92_004789 Vanilla planifolia HOM05D006676 ORTHO05D008394 1.0e-17 94.4 209 36.8
Zm00001eb206480 Zea mays HOM05D006676 ORTHO05D008394 8.8e-17 91.3 171 38.0
Aqoxy6G00953 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 1.5e-16 90.5 174 39.1
Oeu032926.1 Olea europaea HOM05D006676 ORTHO05D008394 1.5e-16 90.5 189 38.6
PSO541G6387 Papaver somniferum HOM05D006676 ORTHO05D008394 2.6e-16 89.7 176 39.8
Rhsim08G0109100 Rhododendron simsii HOM05D006676 ORTHO05D008394 5.7e-16 88.6 140 42.1
Medtr5g018550 Medicago truncatula HOM05D006676 ORTHO05D008394 9.7e-16 87.8 178 40.4
Sc16g0001500 Simmondsia chinensis HOM05D006676 ORTHO05D008394 8.2e-15 84.7 179 35.8
unitig_749.g13556 Utricularia gibba HOM05D006676 ORTHO05D008394 1.1e-14 84.3 164 37.8
Ah.02g126080 Amaranthus hybridus HOM05D006676 ORTHO05D008394 3.1e-14 82.8 148 37.8
Dinv39914 Davidia involucrata HOM05D006676 ORTHO05D008394 5.3e-14 82.0 95 51.6
CAN.G93.2 Capsicum annuum HOM05D006676 ORTHO05D008394 2.7e-13 79.7 175 34.9
TPR.G29856 Trifolium pratense HOM05D006676 ORTHO05D008394 4.5e-13 79.0 197 37.6
MBI04_g03667_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 7.7e-13 78.2 138 43.5
Migut.K00838 Erythranthe guttata HOM05D006676 ORTHO05D008394 1.9e-11 73.6 182 34.6
Nitab4.5_0002126g0070 Nicotiana tabacum HOM05D006676 ORTHO05D008394 2.5e-11 73.2 168 36.3
PGSC0003DMG400002746 Solanum tuberosum HOM05D006676 ORTHO05D008394 2.5e-11 73.2 168 35.1
THA.LOC104819832 Tarenaya hassleriana HOM05D006676 ORTHO05D008394 2.5e-11 73.2 185 40.5
Nitab4.5_0000090g0080 Nicotiana tabacum HOM05D006676 ORTHO05D008394 1.0e-09 67.8 169 35.5
SGA_v2.0_scaffold175G39367 Striga asiatica HOM05D006676 ORTHO05D008394 1.0e-09 67.8 142 39.4
vmacro17885 Vaccinium macrocarpon HOM05D006676 ORTHO05D008394 1.4e-09 67.4 248 27.8
AUR62003241 Chenopodium quinoa HOM05D006676 ORTHO05D008394 8.8e-09 64.7 175 33.1
Sc16g0001490 Simmondsia chinensis HOM05D006676 ORTHO05D008394 2.6e-08 63.2 77 49.4
GSVIVG01005096001 Vitis vinifera HOM05D006676 ORTHO05D008394 2.2e-07 60.1 95 41.1
GSVIVG01004606001 Vitis vinifera HOM05D006676 ORTHO05D008394 2.8e-07 59.7 95 40.0
MBI15_g03557_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 3.7e-07 59.3 86 47.7
SGA_v2.0_scaffold1G00184 Striga asiatica HOM05D006676 ORTHO05D008394 8.3e-07 58.2 139 38.1
Peaxi162Scf00019g02117 Petunia axillaris HOM05D006676 ORTHO05D008394 1.4e-06 57.4 133 33.1


User provided reference genes

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