Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p01850 Brassica napus HOM05D005490 ORTHO05D006606 6.0e-252 874.0 548 100.0
BraA01t00174Z Brassica rapa HOM05D005490 ORTHO05D006606 3.3e-250 868.2 480 100.0
C01p01990 Brassica napus HOM05D005490 ORTHO05D006606 1.0e-243 846.7 550 96.0
BolC1t00193H Brassica oleracea HOM05D005490 ORTHO05D006606 3.1e-240 835.1 491 94.5
BcaNung02520 Brassica carinata HOM05D005490 ORTHO05D006606 1.1e-221 773.5 456 95.0
Sp7g34780 Schrenkiella parvula HOM05D005490 ORTHO05D006606 1.4e-221 773.1 479 90.8
Thhalv10025018m.g Eutrema salsugineum HOM05D005490 ORTHO05D006606 2.9e-214 748.8 480 89.0
Carub.0007s0317 Capsella rubella HOM05D005490 ORTHO05D006606 2.0e-210 736.1 481 87.5
Aa31LG6G13990 Aethionema arabicum HOM05D005490 ORTHO05D006606 8.2e-209 730.7 494 82.8
AL7G13750 Arabidopsis lyrata HOM05D005490 ORTHO05D006606 2.7e-204 715.7 481 85.4
AT4G36980 Arabidopsis thaliana HOM05D005490 ORTHO05D006606 8.8e-203 710.7 482 85.1
CARHR245520 Cardamine hirsuta HOM05D005490 ORTHO05D006606 2.2e-201 706.1 480 84.0
THA.LOC104804216 Tarenaya hassleriana HOM05D005490 ORTHO05D006606 1.2e-188 663.7 482 79.3
RcHm_v2.0_Chr2g0105671 Rosa chinensis HOM05D005490 ORTHO05D006606 6.1e-180 634.8 482 75.7
QL06p041379 Quercus lobata HOM05D005490 ORTHO05D006606 2.3e-179 632.9 519 70.7
CiPaw.01G018200 Carya illinoinensis HOM05D005490 ORTHO05D006606 1.7e-177 626.7 485 73.6
Gohir.D11G199100 Gossypium hirsutum HOM05D005490 ORTHO05D006606 3.5e-175 619.0 485 73.6
Thecc.01G056300 Theobroma cacao HOM05D005490 ORTHO05D006606 3.5e-175 619.0 486 74.5
Potri.007G044100 Populus trichocarpa HOM05D005490 ORTHO05D006606 1.5e-173 613.6 486 73.7
Ciclev10025320m.g Citrus clementina HOM05D005490 ORTHO05D006606 1.9e-173 613.2 485 73.6
DCAR_025733 Daucus carota HOM05D005490 ORTHO05D006606 1.2e-172 610.5 510 69.8
TWI09G1398 Tripterygium wilfordii HOM05D005490 ORTHO05D006606 1.6e-172 610.1 485 72.2
Manes.12G106800 Manihot esculenta HOM05D005490 ORTHO05D006606 2.1e-172 609.8 486 73.0
FAN28G1226 Fragaria x ananassa HOM05D005490 ORTHO05D006606 2.8e-172 609.4 498 72.3
FAN19G0012 Fragaria x ananassa HOM05D005490 ORTHO05D006606 8.0e-172 607.8 498 72.1
Duzib187G0068 Durio zibethinus HOM05D005490 ORTHO05D006606 2.3e-171 606.3 498 72.7
GSVIVG01022130001 Vitis vinifera HOM05D005490 ORTHO05D006606 2.3e-171 606.3 484 73.1
Prupe.7G133300 Prunus persica HOM05D005490 ORTHO05D006606 6.8e-171 604.7 485 71.5
Lj2g0003149 Lotus japonicus HOM05D005490 ORTHO05D006606 2.6e-170 602.8 487 71.7
Dinv29986 Davidia involucrata HOM05D005490 ORTHO05D006606 3.4e-170 602.4 488 73.0
Cfa004023 Carpinus fangiana HOM05D005490 ORTHO05D006606 1.9e-168 596.7 487 72.5
Cc07_g05990 Coffea canephora HOM05D005490 ORTHO05D006606 9.2e-168 594.3 485 73.2
Actinidia03792 Actinidia chinensis HOM05D005490 ORTHO05D006606 3.9e-166 589.0 484 71.5
Gorai.007G213300 Gossypium raimondii HOM05D005490 ORTHO05D006606 5.0e-166 588.6 485 70.9
Lalb_Chr05g0213291 Lupinus albus HOM05D005490 ORTHO05D006606 5.0e-166 588.6 489 70.3
Lj7A69T47 Lonicera japonica HOM05D005490 ORTHO05D006606 1.5e-165 587.0 521 68.1
Gohir.A11G192400 Gossypium hirsutum HOM05D005490 ORTHO05D006606 5.6e-165 585.1 485 70.3
Nn5g30300 Nelumbo nucifera HOM05D005490 ORTHO05D006606 5.6e-165 585.1 485 70.1
Sed0007368 Sechium edule HOM05D005490 ORTHO05D006606 5.6e-165 585.1 484 71.7
VMungo1215G3252 Vigna mungo HOM05D005490 ORTHO05D006606 1.2e-164 583.9 487 72.3
Nitab4.5_0002016g0110 Nicotiana tabacum HOM05D005490 ORTHO05D006606 8.9e-163 577.8 485 69.5
Glyma.01G186000 Glycine max HOM05D005490 ORTHO05D006606 4.4e-162 575.5 487 71.3
Sc03g0001580 Simmondsia chinensis HOM05D005490 ORTHO05D006606 7.5e-162 574.7 482 70.3
TPR.G30705 Trifolium pratense HOM05D005490 ORTHO05D006606 9.8e-162 574.3 486 70.6
COL.COLO4_11415 Corchorus olitorius HOM05D005490 ORTHO05D006606 1.7e-161 573.5 448 74.3
Oeu031525.2 Olea europaea HOM05D005490 ORTHO05D006606 2.2e-161 573.2 486 70.8
CsaV3_2G016660 Cucumis sativus L. HOM05D005490 ORTHO05D006606 2.9e-161 572.8 450 72.9
HanXRQChr14g0442791 Helianthus annuus HOM05D005490 ORTHO05D006606 3.7e-161 572.4 480 69.4
arahy.Tifrunner.gnm1.ann1.JF37M9 Arachis hypogaea HOM05D005490 ORTHO05D006606 4.9e-161 572.0 485 70.7
Lsat_1_v5_gn_2_84101 Lactuca sativa HOM05D005490 ORTHO05D006606 7.1e-160 568.2 509 67.2
Psat2g166360 Pisum sativum HOM05D005490 ORTHO05D006606 3.5e-159 565.8 487 70.0
Hma1.2p1_0461F.1_g157810 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 6.0e-159 565.1 481 69.0
Medtr5g017430 Medicago truncatula HOM05D005490 ORTHO05D006606 1.0e-158 564.3 483 69.4
CANSAT01G1717 Cannabis sativa HOM05D005490 ORTHO05D006606 1.5e-157 560.5 453 70.6
Oeu062437.1 Olea europaea HOM05D005490 ORTHO05D006606 1.5e-157 560.5 486 68.3
Phvul.002G018900 Phaseolus vulgaris HOM05D005490 ORTHO05D006606 1.9e-157 560.1 488 70.3
Migut.H00433 Erythranthe guttata HOM05D005490 ORTHO05D006606 3.3e-157 559.3 483 70.0
Gohir.A02G157300 Gossypium hirsutum HOM05D005490 ORTHO05D006606 9.5e-157 557.8 485 70.1
Sabra07G0038800 Salix brachista HOM05D005490 ORTHO05D006606 8.9e-155 551.2 503 65.2
PGSC0003DMG400004042 Solanum tuberosum HOM05D005490 ORTHO05D006606 2.0e-154 550.1 451 69.4
Glyma.11G056000 Glycine max HOM05D005490 ORTHO05D006606 3.4e-154 549.3 487 69.2
ClCG02G012530 Citrullus lanatus HOM05D005490 ORTHO05D006606 5.8e-154 548.5 483 69.4
Solyc02g090850.3 Solanum lycopersicum HOM05D005490 ORTHO05D006606 1.3e-153 547.4 451 69.0
Ca_24770_v3 Cicer arietinum L. HOM05D005490 ORTHO05D006606 4.9e-153 545.4 452 72.1
Hund16323 Selenicereus undatus HOM05D005490 ORTHO05D006606 6.4e-153 545.0 481 69.6
EL10Ac6g15745 Beta vulgaris HOM05D005490 ORTHO05D006606 1.4e-152 543.9 499 66.5
CSS0049924 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 1.2e-151 540.8 488 67.2
arahy.Tifrunner.gnm1.ann1.5GG3L5 Arachis hypogaea HOM05D005490 ORTHO05D006606 7.8e-151 538.1 514 65.2
CAN.G660.7 Capsicum annuum HOM05D005490 ORTHO05D006606 1.7e-150 537.0 455 68.6
ECA238G0711 Erigeron canadensis HOM05D005490 ORTHO05D006606 1.1e-149 534.3 482 67.2
Gorai.003G025100 Gossypium raimondii HOM05D005490 ORTHO05D006606 6.2e-148 528.5 486 67.5
PSO210G6251 Papaver somniferum HOM05D005490 ORTHO05D006606 1.5e-146 523.9 451 67.8
PSO170G3823 Papaver somniferum HOM05D005490 ORTHO05D006606 1.7e-145 520.4 451 67.4
Os03g0395900 Oryza sativa ssp. japonica HOM05D005490 ORTHO05D006606 6.4e-145 518.5 451 68.5
CDE08G0045 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 9.3e-144 514.6 496 62.3
Gohir.D03G023600 Gossypium hirsutum HOM05D005490 ORTHO05D006606 6.0e-143 511.9 452 69.2
SGA_v2.0_scaffold15G07303 Striga asiatica HOM05D005490 ORTHO05D006606 1.5e-141 507.3 447 68.0
AUR62001928 Chenopodium quinoa HOM05D005490 ORTHO05D006606 8.1e-140 501.5 511 60.3
CDE06G1923 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 1.7e-134 483.8 465 62.2
HPP92_004114 Vanilla planifolia HOM05D005490 ORTHO05D006606 1.7e-134 483.8 487 61.2
MD02G1172000 Malus domestica HOM05D005490 ORTHO05D006606 3.0e-134 483.0 375 72.0
ATR1102G026 Amborella trichopoda HOM05D005490 ORTHO05D006606 3.3e-133 479.6 489 62.6
Potri.005G138200 Populus trichocarpa HOM05D005490 ORTHO05D006606 4.0e-131 472.6 376 71.0
FAN26G0668 Fragaria x ananassa HOM05D005490 ORTHO05D006606 4.5e-130 469.2 388 70.4
Aqoxy5G01229 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 7.6e-130 468.4 375 68.8
Peaxi162Scf00450g00420 Petunia axillaris HOM05D005490 ORTHO05D006606 1.9e-128 463.8 485 58.6
TAR381G1106 Trochodendron aralioides HOM05D005490 ORTHO05D006606 4.6e-127 459.1 375 69.9
FAN23G2111 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.7e-121 440.7 391 67.8
Sabra05G0112300 Salix brachista HOM05D005490 ORTHO05D006606 4.3e-117 426.0 559 51.5
AUR62003882 Chenopodium quinoa HOM05D005490 ORTHO05D006606 1.2e-111 407.9 476 54.6
Ah.03g145080 Amaranthus hybridus HOM05D005490 ORTHO05D006606 4.8e-108 396.0 384 65.4
Nitab4.5_0002440g0010 Nicotiana tabacum HOM05D005490 ORTHO05D006606 4.8e-108 396.0 488 52.9
FvH4_1g16060 Fragaria vesca HOM05D005490 ORTHO05D006606 2.6e-106 390.2 343 71.4
Mapoly0012s0107 Marchantia polymorpha HOM05D005490 ORTHO05D006606 4.3e-101 372.9 469 52.2
Hma1.2p1_0461F.1_g157800 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 1.7e-100 370.9 347 68.3
unitig_899.g14662 Utricularia gibba HOM05D005490 ORTHO05D006606 7.7e-98 362.1 374 62.0
Rhsim08G0100400 Rhododendron simsii HOM05D005490 ORTHO05D006606 3.8e-97 359.8 452 56.9
MD15G1284300 Malus domestica HOM05D005490 ORTHO05D006606 3.6e-95 353.2 337 65.9
Eucgr.I00926 Eucalyptus grandis HOM05D005490 ORTHO05D006606 1.0e-94 351.7 346 65.9
Atru.chr3.327 Acer truncatum HOM05D005490 ORTHO05D006606 1.3e-89 334.7 310 68.7
Pp3c7_5520 Physcomitrium patens HOM05D005490 ORTHO05D006606 8.5e-89 332.0 523 47.2
Dinv39848 Davidia involucrata HOM05D005490 ORTHO05D006606 1.5e-88 331.3 273 72.5
vmacro17955 Vaccinium macrocarpon HOM05D005490 ORTHO05D006606 4.7e-87 326.2 377 61.8
MELO3C020875.2 Cucumis melo HOM05D005490 ORTHO05D006606 1.1e-85 321.6 309 67.0
Pp3c11_20900 Physcomitrium patens HOM05D005490 ORTHO05D006606 2.5e-80 303.9 521 44.5
HPP92_004074 Vanilla planifolia HOM05D005490 ORTHO05D006606 2.0e-74 284.3 346 57.2
Zm00001eb019290 Zea mays HOM05D005490 ORTHO05D006606 2.7e-66 257.3 273 61.2
Haze_15401 Corylus avellana HOM05D005490 ORTHO05D006606 4.5e-66 256.5 233 69.5
Haze_15403 Corylus avellana HOM05D005490 ORTHO05D006606 2.3e-65 254.2 233 69.1
Sopen02g035470 Solanum pennellii HOM05D005490 ORTHO05D006606 6.6e-65 252.7 241 63.5
Actinidia16483 Actinidia chinensis HOM05D005490 ORTHO05D006606 5.2e-62 243.0 315 55.9
SEGI_41077 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 5.2e-62 243.0 332 53.0
SMO356G0652 Selaginella moellendorffii HOM05D005490 ORTHO05D006606 4.6e-58 229.9 247 53.0
CBR_g38045 Chara braunii HOM05D005490 ORTHO05D000004 9.5e-56 222.2 457 44.4
Cpa.g.sc55.148 Carica papaya HOM05D005490 ORTHO05D006606 1.2e-55 221.9 128 83.6
SEGI_00791 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 1.2e-55 221.9 149 72.5
Atru.chr3.328 Acer truncatum HOM05D005490 ORTHO05D006606 2.8e-55 220.7 128 83.6
MD15G1284200 Malus domestica HOM05D005490 ORTHO05D006606 5.0e-49 199.9 128 78.9
Actinidia36493 Actinidia chinensis HOM05D005490 ORTHO05D006606 1.4e-43 181.8 352 42.6
Actinidia16484 Actinidia chinensis HOM05D005490 ORTHO05D006606 3.8e-36 157.1 88 84.1
AagrBONN_evm.TU.Sc2ySwM_344.4468 Anthoceros agrestis HOM05D005490 ORTHO05D006606 1.9e-35 154.8 483 32.3
MD02G1172100 Malus domestica HOM05D005490 ORTHO05D006606 6.2e-31 139.8 111 75.7
VMungo1309G0325 Vigna mungo HOM05D005490 ORTHO05D006606 3.1e-30 137.5 162 51.2
CSS0031445 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 4.0e-30 137.1 114 74.6
Aqoxy5G01228 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 3.4e-29 134.0 114 67.5
VMungo0720G1861 Vigna mungo HOM05D005490 ORTHO05D006606 7.3e-24 116.3 145 48.3
SHI08459 Sapria himalayana HOM05D005490 ORTHO05D006606 4.8e-23 113.6 279 32.6
FAN22G1581 Fragaria x ananassa HOM05D005490 ORTHO05D006606 1.3e-20 105.5 72 72.2
FAN17G2271 Fragaria x ananassa HOM05D005490 ORTHO05D006606 3.2e-19 100.9 66 75.8
FAN17G1267 Fragaria x ananassa HOM05D005490 ORTHO05D006606 8.7e-17 92.8 64 76.6
TAR381G1012 Trochodendron aralioides HOM05D005490 ORTHO05D006606 1.9e-16 91.7 77 76.6
VMungo1309G1585 Vigna mungo HOM05D005490 ORTHO05D006606 4.3e-16 90.5 88 59.1
VMungo0251G2361 Vigna mungo HOM05D007793 ORTHO05D010104 9.6e-16 89.4 87 56.3
CDE08G1038 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 2.6e-13 81.3 382 27.2
Actinidia36494 Actinidia chinensis HOM05D005490 ORTHO05D006606 1.3e-12 79.0 80 62.5
Cre12.g498350 Chlamydomonas reinhardtii HOM05D005490 ORTHO05D006606 4.9e-12 77.0 293 31.4
Atru.chr10.1611 Acer truncatum HOM05D005490 ORTHO05D006606 1.2e-10 72.4 50 68.0
Actinidia12052 Actinidia chinensis HOM05D005490 ORTHO05D006606 9.0e-06 56.2 101 41.6


User provided reference genes

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