Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p01790 Brassica napus HOM05D005640 ORTHO05D102632 3.2e-78 295.0 153 100.0
C04p14510 Brassica napus HOM05D007099 ORTHO05D009081 2.7e-08 62.8 48 70.8
BcaB06g28779 Brassica carinata HOM05D007099 ORTHO05D009081 6.0e-08 61.6 36 86.1
A10p33680 Brassica napus HOM05D005640 ORTHO05D007124 5.1e-07 58.5 34 79.4
BraA10t45399Z Brassica rapa HOM05D005640 ORTHO05D007124 5.1e-07 58.5 34 79.4
Rhsim04G0234500 Rhododendron simsii HOM05D005640 ORTHO05D007124 5.1e-07 58.5 35 80.0
AL6G10950 Arabidopsis lyrata HOM05D005640 ORTHO05D007124 6.6e-07 58.2 34 82.4
AT5G01230 Arabidopsis thaliana HOM05D005640 ORTHO05D007124 6.6e-07 58.2 34 82.4
BcaB07g33172 Brassica carinata HOM05D005640 ORTHO05D007124 6.6e-07 58.2 34 82.4
BcaC06g31969 Brassica carinata HOM05D005640 ORTHO05D007124 6.6e-07 58.2 33 81.8
BcaC08g43674 Brassica carinata HOM05D005640 ORTHO05D007124 6.6e-07 58.2 34 82.4
C06p10940 Brassica napus HOM05D005640 ORTHO05D007124 6.6e-07 58.2 34 82.4
BolC6t36175H Brassica oleracea HOM05D005640 ORTHO05D007124 6.6e-07 58.2 34 82.4
BraSC56t46387Z Brassica rapa HOM05D005640 ORTHO05D007124 6.6e-07 58.2 34 82.4
Cc06_g01570 Coffea canephora HOM05D005640 ORTHO05D007124 6.6e-07 58.2 34 82.4
DCAR_028821 Daucus carota HOM05D005640 ORTHO05D007124 6.6e-07 58.2 34 82.4
Thhalv10014175m.g Eutrema salsugineum HOM05D005640 ORTHO05D007124 6.6e-07 58.2 34 82.4
Solyc09g014320.4 Solanum lycopersicum HOM05D005640 ORTHO05D007124 6.6e-07 58.2 34 82.4
Sopen09g007180 Solanum pennellii HOM05D005640 ORTHO05D007124 6.6e-07 58.2 34 82.4
PGSC0003DMG400020316 Solanum tuberosum HOM05D005640 ORTHO05D007124 6.6e-07 58.2 34 82.4
Aa31LG1G22860 Aethionema arabicum HOM05D005640 ORTHO05D007124 8.6e-07 57.8 34 79.4
arahy.Tifrunner.gnm1.ann1.SUU1LP Arachis hypogaea HOM05D005640 ORTHO05D007124 8.6e-07 57.8 34 79.4
C04p63850 Brassica napus HOM05D007099 ORTHO05D009081 8.6e-07 57.8 37 83.8
BolC4t27852H Brassica oleracea HOM05D007099 ORTHO05D009081 8.6e-07 57.8 37 83.8
Carub.0001s3488 Capsella rubella HOM05D005640 ORTHO05D007124 8.6e-07 57.8 34 79.4
Carub.0006s0065 Capsella rubella HOM05D005640 ORTHO05D007124 8.6e-07 57.8 34 79.4
CARHR211570 Cardamine hirsuta HOM05D005640 ORTHO05D007124 8.6e-07 57.8 34 79.4
MELO3C009184.2 Cucumis melo HOM05D005640 ORTHO05D007124 8.6e-07 57.8 34 79.4
CsaV3_3G034060 Cucumis sativus L. HOM05D005640 ORTHO05D007124 8.6e-07 57.8 34 79.4
Eucgr.K02994 Eucalyptus grandis HOM05D005640 ORTHO05D007124 8.6e-07 57.8 34 79.4
FAN14G4623 Fragaria x ananassa HOM05D005640 ORTHO05D007124 8.6e-07 57.8 30 86.7
Glyma.15G073500 Glycine max HOM05D005640 ORTHO05D007124 8.6e-07 57.8 34 79.4
Lj6g0003369 Lotus japonicus HOM05D005640 ORTHO05D007124 8.6e-07 57.8 34 79.4
Lalb_Chr13g0291231 Lupinus albus HOM05D005640 ORTHO05D007124 8.6e-07 57.8 34 79.4
MD04G1148100 Malus domestica HOM05D005640 ORTHO05D007124 8.6e-07 57.8 34 79.4
MD12G1161600 Malus domestica HOM05D005640 ORTHO05D007124 8.6e-07 57.8 34 79.4
Medtr2g013490 Medicago truncatula HOM05D005640 ORTHO05D007124 8.6e-07 57.8 34 79.4
Phvul.006G186100 Phaseolus vulgaris HOM05D005640 ORTHO05D007124 8.6e-07 57.8 34 79.4
Psat1g205240 Pisum sativum HOM05D005640 ORTHO05D007124 8.6e-07 57.8 34 79.4
Potri.019G056300 Populus trichocarpa HOM05D005640 ORTHO05D007124 8.6e-07 57.8 34 79.4
Prupe.6G272000 Prunus persica HOM05D005640 ORTHO05D007124 8.6e-07 57.8 34 79.4
Sabra19G0071800 Salix brachista HOM05D005640 ORTHO05D007124 8.6e-07 57.8 34 79.4
Sp1g41690 Schrenkiella parvula HOM05D005640 ORTHO05D007124 8.6e-07 57.8 34 79.4
TPR.G29055 Trifolium pratense HOM05D005640 ORTHO05D007124 8.6e-07 57.8 34 79.4
TWI74G1464 Tripterygium wilfordii HOM05D005640 ORTHO05D007124 8.6e-07 57.8 34 79.4
VMungo0540G0440 Vigna mungo HOM05D005640 ORTHO05D007124 8.6e-07 57.8 34 79.4
Atru.chr8.2209 Acer truncatum HOM05D005640 ORTHO05D007124 1.1e-06 57.4 34 76.5
BcaNung06801 Brassica carinata HOM05D005640 ORTHO05D007124 1.1e-06 57.4 34 76.5
BcaNung07270 Brassica carinata HOM05D005640 ORTHO05D007124 1.1e-06 57.4 34 76.5
C09p74590 Brassica napus HOM05D005640 ORTHO05D007124 1.1e-06 57.4 34 76.5
BolC9t60191H Brassica oleracea HOM05D005640 ORTHO05D007124 1.1e-06 57.4 34 76.5
Ciclev10012237m.g Citrus clementina HOM05D005640 ORTHO05D007124 1.1e-06 57.4 34 76.5
ClCG10G021930 Citrullus lanatus HOM05D005640 ORTHO05D007124 1.5e-06 57.0 34 79.4
FvH4_6g11910 Fragaria vesca HOM05D005640 ORTHO05D007124 1.5e-06 57.0 29 89.7
FAN02G3073 Fragaria x ananassa HOM05D005640 ORTHO05D007124 1.5e-06 57.0 29 89.7
FAN05G4535 Fragaria x ananassa HOM05D005640 ORTHO05D007124 1.5e-06 57.0 29 89.7
FAN14G5960 Fragaria x ananassa HOM05D005640 ORTHO05D007124 1.5e-06 57.0 29 89.7
Glyma.13G239701 Glycine max HOM05D005640 ORTHO05D007124 1.5e-06 57.0 29 89.7
RcHm_v2.0_Chr3g0463651 Rosa chinensis HOM05D005640 ORTHO05D007124 1.5e-06 57.0 29 89.7
RcHm_v2.0_Chr5g0026681 Rosa chinensis HOM05D005640 ORTHO05D007124 1.5e-06 57.0 29 89.7
vmacro08858 Vaccinium macrocarpon HOM05D005640 ORTHO05D007124 1.5e-06 57.0 54 59.3
Actinidia01106 Actinidia chinensis HOM05D005640 ORTHO05D007124 1.9e-06 56.6 34 79.4
Aqoxy253s002 Aquilegia oxysepala HOM05D005640 ORTHO05D007124 1.9e-06 56.6 30 83.3
Aqoxy4G02650 Aquilegia oxysepala HOM05D005640 ORTHO05D007124 1.9e-06 56.6 37 73.0
BcaB02g09534 Brassica carinata HOM05D007099 ORTHO05D009081 1.9e-06 56.6 43 72.1
BcaC02g11514 Brassica carinata HOM05D007099 ORTHO05D009081 1.9e-06 56.6 43 72.1
A04p26440 Brassica napus HOM05D007099 ORTHO05D009081 1.9e-06 56.6 37 81.1
BolC4t23034H Brassica oleracea HOM05D007099 ORTHO05D009081 1.9e-06 56.6 43 72.1
BraA04t18148Z Brassica rapa HOM05D007099 ORTHO05D009081 1.9e-06 56.6 37 81.1
CSS0014404 Camellia sinensis var. sinensis HOM05D005640 ORTHO05D007124 1.9e-06 56.6 34 79.4
Cfa017245 Carpinus fangiana HOM05D005640 ORTHO05D007124 1.9e-06 56.6 34 76.5
COL.COLO4_14570 Corchorus olitorius HOM05D005640 ORTHO05D007124 1.9e-06 56.6 34 76.5
Haze_20962 Corylus avellana HOM05D005640 ORTHO05D007124 1.9e-06 56.6 34 76.5
Dinv37073 Davidia involucrata HOM05D005640 ORTHO05D007124 1.9e-06 56.6 34 79.4
HanXRQChr06g0182301 Helianthus annuus HOM05D005640 ORTHO05D007124 1.9e-06 56.6 46 65.2
Lj3C956T0 Lonicera japonica HOM05D005640 ORTHO05D007124 1.9e-06 56.6 34 79.4
Manes.09G103200 Manihot esculenta HOM05D005640 ORTHO05D007124 1.9e-06 56.6 34 76.5
Nn2g13636 Nelumbo nucifera HOM05D005640 ORTHO05D007124 1.9e-06 56.6 37 73.0
QL07p036011 Quercus lobata HOM05D005640 ORTHO05D007124 1.9e-06 56.6 34 76.5
Sed0003609 Sechium edule HOM05D005640 ORTHO05D007124 1.9e-06 56.6 34 76.5
THA.LOC104827044 Tarenaya hassleriana HOM05D005640 ORTHO05D007124 1.9e-06 56.6 34 76.5
Thecc.05G020300 Theobroma cacao HOM05D005640 ORTHO05D007124 1.9e-06 56.6 34 76.5
arahy.Tifrunner.gnm1.ann1.KN3063 Arachis hypogaea HOM05D005640 ORTHO05D007124 2.5e-06 56.2 34 76.5
Ca_00331_v3 Cicer arietinum L. HOM05D005640 ORTHO05D007124 2.5e-06 56.2 34 76.5
ECA236G3070 Erigeron canadensis HOM05D005640 ORTHO05D007124 2.5e-06 56.2 46 65.2
Hma1.2p1_0763F.1_g214810 Hydrangea macrophylla HOM05D005640 ORTHO05D007124 2.5e-06 56.2 34 79.4
Lsat_1_v5_gn_8_99960 Lactuca sativa HOM05D005640 ORTHO05D007124 2.5e-06 56.2 46 65.2
PGR004G2817 Punica granatum HOM05D005640 ORTHO05D007124 2.5e-06 56.2 34 76.5
GSVIVG01033996001 Vitis vinifera HOM05D005640 ORTHO05D007124 2.5e-06 56.2 34 76.5
Lalb_Chr07g0193461 Lupinus albus HOM05D005640 ORTHO05D007124 3.3e-06 55.8 34 76.5
Sed0006295 Sechium edule HOM05D005640 ORTHO05D007124 3.3e-06 55.8 34 73.5
EL10Ac3g06189 Beta vulgaris HOM05D005640 ORTHO05D007124 4.3e-06 55.5 34 76.5
CANSAT35G1124 Cannabis sativa HOM05D005640 ORTHO05D007124 4.3e-06 55.5 34 70.6
CAN.G355.1 Capsicum annuum HOM05D005640 ORTHO05D007124 4.3e-06 55.5 34 79.4
AUR62002505 Chenopodium quinoa HOM05D005640 ORTHO05D007124 4.3e-06 55.5 34 76.5
AUR62023685 Chenopodium quinoa HOM05D005640 ORTHO05D007124 4.3e-06 55.5 34 76.5
Peaxi162Scf00141g00514 Petunia axillaris HOM05D005640 ORTHO05D007124 4.3e-06 55.5 34 79.4
Sc01g0006650 Simmondsia chinensis HOM05D005640 ORTHO05D007124 4.3e-06 55.5 34 76.5
PSO384G3533 Papaver somniferum HOM05D005640 ORTHO05D007124 5.6e-06 55.1 37 73.0
SGA_v2.0_scaffold240G44103 Striga asiatica HOM05D005640 ORTHO05D007124 5.6e-06 55.1 34 79.4
SGA_v2.0_scaffold8G04370 Striga asiatica HOM05D005640 ORTHO05D007124 5.6e-06 55.1 34 79.4
Ah.07g203360 Amaranthus hybridus HOM05D005640 ORTHO05D007124 7.3e-06 54.7 29 86.2
CiPaw.10G154800 Carya illinoinensis HOM05D005640 ORTHO05D007124 7.3e-06 54.7 34 73.5
Duzib128G1759 Durio zibethinus HOM05D005640 ORTHO05D007124 7.3e-06 54.7 34 73.5
Gohir.A09G163900 Gossypium hirsutum HOM05D005640 ORTHO05D007124 7.3e-06 54.7 34 76.5
Gohir.D09G159400 Gossypium hirsutum HOM05D005640 ORTHO05D007124 7.3e-06 54.7 34 76.5
Gorai.006G181100 Gossypium raimondii HOM05D005640 ORTHO05D007124 7.3e-06 54.7 34 76.5
Migut.L02000 Erythranthe guttata HOM05D005640 ORTHO05D007124 9.6e-06 54.3 33 78.8
Oeu030523.1 Olea europaea HOM05D005640 ORTHO05D007124 9.6e-06 54.3 32 81.2


User provided reference genes

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